prot_H-akashiwo_Contig100.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig100.2.1
Unique Nameprot_H-akashiwo_Contig100.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length110
Homology
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A7S2UTE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTE4_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.080e-25
Identity = 50/107 (46.73%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    5 QLGVAPRINGGLLSNFQGKYVTLVGKVLN--QNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLFY 109
            Q GV PRING L  NF G+ V LVGKVL+  +N   A  ++SDG  V V ++PG  Y + +VEI GEV  DL+++E KS +YG++F+++ Y  +++LA G++  LFY
Sbjct:    7 QEGVTPRINGSLRQNFVGRPVCLVGKVLDVQENSGSAVIQSSDGSSVQVVMAPGSSYLTSFVEIVGEVLPDLSIKEFKSIDYGENFDLDLYNQVLQLANGKYQKLFY 113          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.260e-21
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 0
Query:   10 PRINGGLLSNFQGKYVTLVGKVLN-QNGQI-ATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLFY 109
            PR+NG +LS F G  V +VGKVL+ Q G   A  E SDG ++TVQ++ G  + SQYVE+ G ++    ++E KS ++GD F++  Y+  V L TG+FS LFY
Sbjct:    7 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFY 108          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A6G0XXL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.310e-21
Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:    9 APRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLF 108
            APR+N  +++ F G+ V LVG + +  G +A  + SDG  VTV   PG  Y+S++VE+ G V  D +++E K   +GD F+++NY+ LV L  G+FSSLF
Sbjct:    7 APRVNKAIMAQFVGRTVALVGSLESWTGSMAVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLF 106          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.550e-20
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    9 APRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLF 108
            APR+N  +L+ F G  V+LVG + +  G  A  + SD   VTV   PG  Y+S+YVE+ G V  D +++E K   +GD F+++NY+ LV+L  G++S+LF
Sbjct:    7 APRVNKAILAQFVGHTVSLVGSIESWTGSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A7S2DZE6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DZE6_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 8.260e-17
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    6 LGVAPRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEV-----NSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLF 108
            +GV+PR+N GLL  F GK V +VG+VL+Q+      E SDG    V  S GQ      +E+ G       +  +++R  + C   D+F+++NYEGLV L  G+   LF
Sbjct:   14 VGVSPRVNAGLLPQFDGKRVCIVGRVLSQDADRVRVECSDGGHTIVLSSDGQFNERSIIEVVGVAGDHANDGSMSLRSERICPLDDTFDLQNYEGLVNLVNGKARHLF 121          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A197JHU3_9FUNG (Replication factor A protein 3 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JHU3_9FUNG)

HSP 1 Score: 75.5 bits (184), Expect = 1.640e-15
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    6 LGVAPRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLF 108
            L    R+N  +L N  G+ V  VG+  ++   +ATF ASD   VTV ++    Y +++VE+ G VN D ++ E+ S  +GD FNME Y+ +V+ A  +F S+F
Sbjct:    3 LPTTKRVNSAMLQNCIGETVRFVGEFKSRQHPVATFLASDKGSVTVVMNDTSQYGTKFVEVIGTVNPDRSITEMISTNFGDDFNMETYDAMVRKAQ-KFPSVF 104          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A2G4SIE8_RHIZD (Replication factor A protein 3 n=2 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SIE8_RHIZD)

HSP 1 Score: 75.1 bits (183), Expect = 2.320e-15
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   10 PRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNME 91
            PR+N  L   + GK V LVGK+ + +G  A  EASD  QV V L+    + +QYVE+ G+V+ D T+RE K+   GD+F+++
Sbjct:    6 PRVNSALREKYVGKTVRLVGKITSFSGNTAVLEASDHGQVLVHLNGESQWGTQYVEVIGQVDQDFTIREFKTTNMGDNFDLD 87          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A7S0XQA8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQA8_HEMAN)

HSP 1 Score: 72.0 bits (175), Expect = 7.470e-14
Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 0
Query:    9 APRINGGLLSNFQGKYVTLVGKVLNQ--NGQIATFEASDGQQVTVQLSPGQH--YNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLATGRFSSLF 108
            APRIN  LL    G  VT+VGKV      G+    EASDG  + V  S      Y S++VE+ G VNSD TV E +   +G+ F+++ Y  LV L+ G    LF
Sbjct:   28 APRINSTLLQQRVGMQVTVVGKVKPGFGGGEFVHLEASDGGDIVVNRSQAVQGEYGSEFVEVVGTVNSDRTVTEARFTNFGNDFDLKQYNDLVLLSNGALKHLF 131          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A1C7NGW9_9FUNG (Replication factor A protein 3 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NGW9_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 2.130e-13
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   10 PRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVK 98
            PRIN  L   + G+ V LVGK+ + +G  A  +ASD  QV V+L+    + + YVE+ G++ SD T+RE K+   G+SF+++    +V+
Sbjct:    6 PRINSALREKYVGRVVRLVGKLHSLSGNTAVLDASDHGQVMVKLNGESQWGTDYVEVIGQIESDYTLREFKTSNLGNSFDLDMANKVVE 94          
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Match: A0A433QMJ0_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QMJ0_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 4.080e-12
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   10 PRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVTVQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSF 88
            PRIN  L S + G+ V +V KV+  +G+IAT EA D  QV V ++    + + YVE+   V S+L++ EL S ++GDSF
Sbjct:   18 PRINSELRSQYCGQIVRIVSKVIRIDGKIATIEAPDSTQVQVTMADDSQWGTLYVELIARVESNLSLTELASTDFGDSF 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig100.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UTE4_9STRA1.080e-2546.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FVA2_ECTSI1.260e-2146.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0XXL0_9STRA6.310e-2143.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UW39_9STRA2.550e-2042.00Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A7S2DZE6_9STRA8.260e-1737.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A197JHU3_9FUNG1.640e-1537.86Replication factor A protein 3 n=1 Tax=Linnemannia... [more]
A0A2G4SIE8_RHIZD2.320e-1542.68Replication factor A protein 3 n=2 Tax=Rhizopus Ta... [more]
A0A7S0XQA8_HEMAN7.470e-1441.35Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A1C7NGW9_9FUNG2.130e-1338.20Replication factor A protein 3 n=1 Tax=Choanephora... [more]
A0A433QMJ0_9FUNG4.080e-1243.04Uncharacterized protein n=2 Tax=Jimgerdemannia fla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 7..109
e-value: 1.6E-30
score: 107.3
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 9..108
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 2..101
e-value: 4.1E-21
score: 75.3
NoneNo IPR availablePANTHERPTHR15114REPLICATION PROTEIN A3coord: 9..108
NoneNo IPR availableCDDcd04479RPA3coord: 9..100
e-value: 7.30158E-31
score: 103.497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig100contigH-akashiwo_Contig100:28546..29246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig100.2.1mRNA_H-akashiwo_Contig100.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig100 28283..29273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig100.2.1 ID=prot_H-akashiwo_Contig100.2.1|Name=mRNA_H-akashiwo_Contig100.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=110bp
MDTKQLGVAPRINGGLLSNFQGKYVTLVGKVLNQNGQIATFEASDGQQVT
VQLSPGQHYNSQYVEITGEVNSDLTVRELKSCEYGDSFNMENYEGLVKLA
TGRFSSLFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR013970Rfa2