prot_H-akashiwo_Contig1.17.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.17.1
Unique Nameprot_H-akashiwo_Contig1.17.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length488
Homology
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BLAST of mRNA_H-akashiwo_Contig1.17.1 vs. uniprot
Match: A0A7S3UV21_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV21_HETAK)

HSP 1 Score: 201 bits (511), Expect = 3.460e-55
Identity = 140/198 (70.71%), Postives = 149/198 (75.25%), Query Frame = 0 
Query:    5 LESNDVDAAMTAHRQALDFHPEIADAHFRLA-----VCFRRRRAT------------------------FLPQPRTVLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGRHEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAXXXXXXXXXXXXXXXXXXGVALKAQGDLAGA 173
            L+  D+DAA++A+++A DF P  ADAHF L      + F+  R                                 VLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGRHEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAXXXXXXXXXXXXXXXXXXGVALKAQGDLAGA
Sbjct:   51 LDKGDLDAAISAYKRAADFDPVHADAHFELGHALGEIHFKMGRELESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGRHEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAXXXXXXXXXXXXXXXXXXGVALKAQGDLAGA 248
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BLAST of mRNA_H-akashiwo_Contig1.17.1 vs. uniprot
Match: A0A7S3UV04_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV04_HETAK)

HSP 1 Score: 201 bits (511), Expect = 1.740e-54
Identity = 140/198 (70.71%), Postives = 149/198 (75.25%), Query Frame = 0 
Query:    5 LESNDVDAAMTAHRQALDFHPEIADAHFRLA-----VCFRRRRAT------------------------FLPQPRTVLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGRHEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAXXXXXXXXXXXXXXXXXXGVALKAQGDLAGA 173
            L+  D+DAA++A+++A DF P  ADAHF L      + F+  R                                 VLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGRHEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAXXXXXXXXXXXXXXXXXXGVALKAQGDLAGA
Sbjct:   51 LDKGDLDAAISAYKRAADFDPVHADAHFELGHALGEIHFKMGRELESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGRHEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAXXXXXXXXXXXXXXXXXXGVALKAQGDLAGA 248
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BLAST of mRNA_H-akashiwo_Contig1.17.1 vs. uniprot
Match: A0A7S3XMQ0_HETAK (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMQ0_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 2.100e-5
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:  303 RGGAARLREAEDLVRRAVALAPKNPLNMWFLGRVLEEKGDWAGAET 348
            RGG  RLREAEDL+RRAVALAPKNP+++  LG +L+ KG    AE+
Sbjct:  141 RGGEERLREAEDLLRRAVALAPKNPIHIANLGFLLQTKGQLEEAES 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S3UV21_HETAK3.460e-5570.71Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3UV04_HETAK1.740e-5470.71Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XMQ0_HETAK2.100e-563.04Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 397..445
NoneNo IPR availablePFAMPF13414TPR_11coord: 132..168
e-value: 7.0E-12
score: 44.8
NoneNo IPR availablePFAMPF13432TPR_16coord: 305..353
e-value: 5.0E-5
score: 23.8
coord: 227..289
e-value: 5.9E-12
score: 45.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..487
NoneNo IPR availablePANTHERPTHR44809FAMILY NOT NAMEDcoord: 211..459
coord: 90..232
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 222..255
score: 8.991087
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 327..360
e-value: 170.0
score: 4.1
coord: 154..187
e-value: 3.2E-4
score: 30.0
coord: 290..326
e-value: 69.0
score: 7.6
coord: 119..153
e-value: 0.0018
score: 27.6
coord: 256..289
e-value: 5.0E-6
score: 36.0
coord: 85..118
e-value: 27.0
score: 11.1
coord: 188..221
e-value: 5.1E-5
score: 32.7
coord: 222..255
e-value: 4.2E-6
score: 36.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 222..255
score: 11.003901
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 154..187
score: 10.0009
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 256..289
score: 9.9124
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 188..221
score: 10.7384
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 75..158
e-value: 6.3E-16
score: 60.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 261..388
e-value: 1.4E-25
score: 91.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 159..192
e-value: 6.6E-9
score: 38.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..74
e-value: 7.9E-6
score: 27.6
coord: 193..260
e-value: 1.6E-22
score: 81.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..187
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 133..386
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 190..221
e-value: 3.0E-5
score: 23.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:1525256..1570429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.17.1mRNA_H-akashiwo_Contig1.17.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 1524913..1570698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.17.1 ID=prot_H-akashiwo_Contig1.17.1|Name=mRNA_H-akashiwo_Contig1.17.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=488bp
MGRELESNDVDAAMTAHRQALDFHPEIADAHFRLAVCFRRRRATFLPQPR
TVLSAKKGDLAAAETSYRRATVPAEGGAPDADAVAKALVRLGRKSIDAGR
HEKARAWYADAAGLAPGLATAHFGLGYVLGEKLGRLEDCIAAYRKAIELD
PEYADAHLNLGVALKAQGDLAGAVASSRRALELEPEYTVAHLKLGAALKA
QGDLAGAVASYRRAVELDPKYVLAHHNLGVALQAQGDLAGAVTSYRRALD
LNPEHAVARNNLGIALRAQGDLPGAEAAYRRALEAQPDHADALGKLGDLL
RERGGAARLREAEDLVRRAVALAPKNPLNMWFLGRVLEEKGDWAGAETQF
REGMALAPETPHYARKVGEMLEKMDQLAQAETMYRKDKVRCELEAQLNEA
RAAAAAAEAEAAAQRQEAGRLRARLAETEKEAGAKRAANALLKREAEVLR
DRWAEAVRREELLEQRLSRRPAESTRTEETAGAVQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013105TPR_2