prot_H-akashiwo_Contig1.162.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.162.1
Unique Nameprot_H-akashiwo_Contig1.162.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length125
Homology
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A7S4D9E5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9E5_HETAK)

HSP 1 Score: 215 bits (548), Expect = 2.590e-69
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 
Query:    1 MRPTYRQDSMQNISSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFL 108
            MRPTYRQDSMQNISSKLQKVIA+QQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKD L
Sbjct:   68 MRPTYRQDSMQNISSKLQKVIAEQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDLL 175
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: D8LCY2_ECTSI (Holliday junction resolvase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY2_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.620e-16
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0 
Query:   13 ISSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLD 109
            +  KL++++ D  A G VVGWPL   G    QC  VL FL  +H   +V IP+ L+DER TSV+AR  L D   G+K + + ED+ AA +IL+ FLD
Sbjct:  142 VIGKLREIVEDCSACGLVVGWPLSKSGRAEGQCLMVLQFLRQLHLRGKVDIPVTLFDERMTSVEARGILKDDGLGRK-IAEREDETAAMVILQGFLD 237
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: T0L569_9BACT (Putative pre-16S rRNA nuclease n=1 Tax=candidate division Zixibacteria bacterium RBG-1 TaxID=1379698 RepID=T0L569_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 2.020e-14
Identity = 38/100 (38.00%), Postives = 67/100 (67.00%), Query Frame = 0 
Query:   12 NISSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLDHV 111
            ++ S ++++IA+Q+    ++G+P   DGS+G +   VLAF   + +   + IP++LWDER T+V A+  L +A+   K+ K+  D++AA LIL+++LDHV
Sbjct:   39 DLISYIKQLIAEQEIAKIILGFPKNMDGSVGPKGKEVLAFKESLEKA--IDIPVILWDERLTTVSAQRSLREAEVKMKKGKKFLDKIAAVLILQNYLDHV 136
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A501PSN3_9PROT (Putative pre-16S rRNA nuclease n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PSN3_9PROT)

HSP 1 Score: 69.3 bits (168), Expect = 2.190e-12
Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = 0 
Query:    4 TYRQDSMQNISSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLDHVKML 114
            T R+      S +L ++I +Q   G V+G P+  DGS G +C     F   M  + ++ IP++ WDER +++     L DA   +KR  ++ D++AA+ IL+  LDH+  L
Sbjct:   45 TIRRKKFTTDSERLLQIIKEQNVGGLVLGLPMNMDGSEGPRCQSTRQFAANM--LEKIDIPIIFWDERMSTMAVTRTLLDADASRKRRSELVDKMAASYILQGALDHLSNL 153
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A2E8RRD3_9BACT (Putative pre-16S rRNA nuclease n=5 Tax=Bacteria TaxID=2 RepID=A0A2E8RRD3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 5.800e-12
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:   15 SKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLDHVKM 113
            S + ++I + + I  VVG PL  D  + +Q   +  F + +    E Q  +V WDER T++ A+  +   KT +KR KQ  DQ+AAALIL+D+L H++M
Sbjct:   85 SAIMELIDEYKPIQIVVGLPLTWDDQISIQAQKIKDFSSILAV--EAQAEIVFWDERRTTIQAQEIMITNKTRRKRKKQKVDQIAAALILEDYLQHLQM 181
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A1M6JSX6_9CLOT (Putative pre-16S rRNA nuclease n=1 Tax=Paramaledivibacter caminithermalis DSM 15212 TaxID=1121301 RepID=A0A1M6JSX6_9CLOT)

HSP 1 Score: 67.4 bits (163), Expect = 8.770e-12
Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 0 
Query:   15 SKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLD 109
            ++L+K+I++++    VVG P   +G+LG Q   VL+F+  +   N+V I +VLWDER T+V A   L  A   +K+ K++ D+VAA  IL+ +LD
Sbjct:   41 NRLRKIISEKEVKKIVVGLPKNMNGTLGPQGKKVLSFVEKLK--NKVDIEIVLWDERLTTVAAERMLISADVSRKKRKKVIDKVAAVYILQGYLD 133
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A495YXC5_9BACT (Putative pre-16S rRNA nuclease n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495YXC5_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 1.570e-11
Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 0 
Query:    4 TYRQDSMQNISSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLDHVK 112
            T ++ S + + ++L +++A       VVG PL  DG  G Q   V  F   + Q  +V +P+V WDE  T+V+A   L   K  +K+ KQ+ DQVAA LIL+ +L+ ++
Sbjct:   31 TIQRKSRKAVLAELGELVAVHNVERIVVGLPLQLDGETGTQAKKVKQFAKRLAQ--QVNLPIVFWDESFTTVEASQILRGTKKRRKKRKQVIDQVAAVLILEGYLEELR 137
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A7L5YVH6_9CHLR (Holliday junction resolvase RuvX n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7L5YVH6_9CHLR)

HSP 1 Score: 66.2 bits (160), Expect = 1.830e-11
Identity = 37/106 (34.91%), Postives = 61/106 (57.55%), Query Frame = 0 
Query:   15 SKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAK-TGKKRMKQMEDQVAAALILKDFLDHVKMLEDCTE 119
            +++ +++A+Q A+G VVG+PL  DG+ G Q      +   + Q   V +P++LWDER ++ +A     DA+  G  R     D VAAA+IL+ +LD V+     T+
Sbjct:   18 ARIGQILAEQGAVGIVVGYPLNDDGTAGPQARQTARYARRLAQA--VSVPVMLWDERLSTFEADDLRRDARRVGHNRRPAASDAVAAAVILQGYLDAVQRARGATD 121
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A2G4YNK4_9PROT (Putative pre-16S rRNA nuclease n=2 Tax=Paremcibacter congregatus TaxID=2043170 RepID=A0A2G4YNK4_9PROT)

HSP 1 Score: 66.6 bits (161), Expect = 2.450e-11
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0 
Query:   14 SSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLD 109
            + +L  +I++Q   G V+G PL  DG+ G +C     F   M    ++ IP+VLWDER ++V     L DA   +KR K++ D++AAA IL+  LD
Sbjct:   55 AERLLTIISEQNVGGLVLGLPLNMDGTEGPRCQSTRQFAENM--AGKIDIPVVLWDERLSTVAVTRTLLDADASRKRRKEVVDKMAAAYILQGALD 148
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BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Match: A0A2D5D9Q3_9HYPH (Putative pre-16S rRNA nuclease n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D5D9Q3_9HYPH)

HSP 1 Score: 66.6 bits (161), Expect = 2.500e-11
Identity = 32/95 (33.68%), Postives = 62/95 (65.26%), Query Frame = 0 
Query:   17 LQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLAFLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAAALILKDFLDHV 111
            L++++ ++     VVG P+  DGS+G +     +F+  + +  E+ IP++LWDER T+V A   L +A   +K+ +Q+ D++AA++I ++FLD++
Sbjct:   59 LERIVNERNICAIVVGDPINMDGSIGPKSQSSRSFIKNLSK--ELDIPILLWDERLTTVSAERSLLEADISRKKRQQIIDKIAASIIXQNFLDYL 151
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4D9E5_HETAK2.590e-6998.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LCY2_ECTSI5.620e-1645.36Holliday junction resolvase-like protein n=1 Tax=E... [more]
T0L569_9BACT2.020e-1438.00Putative pre-16S rRNA nuclease n=1 Tax=candidate d... [more]
A0A501PSN3_9PROT2.190e-1233.33Putative pre-16S rRNA nuclease n=1 Tax=Emcibacter ... [more]
A0A2E8RRD3_9BACT5.800e-1238.38Putative pre-16S rRNA nuclease n=5 Tax=Bacteria Ta... [more]
A0A1M6JSX6_9CLOT8.770e-1240.00Putative pre-16S rRNA nuclease n=1 Tax=Paramalediv... [more]
A0A495YXC5_9BACT1.570e-1135.78Putative pre-16S rRNA nuclease n=1 Tax=Candidatus ... [more]
A0A7L5YVH6_9CHLR1.830e-1134.91Holliday junction resolvase RuvX n=1 Tax=Anaerolin... [more]
A0A2G4YNK4_9PROT2.450e-1138.54Putative pre-16S rRNA nuclease n=2 Tax=Paremcibact... [more]
A0A2D5D9Q3_9HYPH2.500e-1133.68Putative pre-16S rRNA nuclease n=3 Tax=Hyphomicrob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037027YqgF/RNase H-like domain superfamilyGENE3D3.30.420.140coord: 2..118
e-value: 2.4E-23
score: 84.5
IPR005227Putative pre-16S rRNA nucleaseTIGRFAMTIGR00250TIGR00250coord: 6..109
e-value: 5.0E-15
score: 53.7
IPR005227Putative pre-16S rRNA nucleasePFAMPF03652RuvXcoord: 8..109
e-value: 4.3E-18
score: 66.1
IPR005227Putative pre-16S rRNA nucleasePANTHERPTHR33317POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 12..116
IPR005227Putative pre-16S rRNA nucleaseCDDcd16964YqgFcoord: 2..109
e-value: 1.48325E-26
score: 94.0914
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:6708187..6818873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.162.1mRNA_H-akashiwo_Contig1.162.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 6707899..6818889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.162.1 ID=prot_H-akashiwo_Contig1.162.1|Name=mRNA_H-akashiwo_Contig1.162.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=125bp
MRPTYRQDSMQNISSKLQKVIADQQAIGAVVGWPLMPDGSLGMQCGHVLA
FLTGMHQINEVQIPMVLWDERGTSVDARSFLWDAKTGKKRMKQMEDQVAA
ALILKDFLDHVKMLEDCTEEEEGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037027YqgF/RNaseH-like_dom_sf
IPR005227YqgF
IPR012337RNaseH-like_sf