prot_H-akashiwo_Contig1.107.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.107.1
Unique Nameprot_H-akashiwo_Contig1.107.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length150
Homology
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A7S3XPS8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPS8_HETAK)

HSP 1 Score: 301 bits (770), Expect = 4.700e-102
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFGRDDGP 150
            MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFGRDDGP
Sbjct:   84 MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFGRDDGP 233          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.260e-26
Identity = 72/151 (47.68%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    1 MGADRLYAQLRSDLPA-PGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPP-AAGRPGRGLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFGRDDG 149
            MG D+LYA+L +D  A P  A           VVKLP SGGVV R  + RR  R ARVREYFYG P A  R    L+P ++E     + V RVGG ++S  +LPVGQ + L P R   V   + DLLHAVLAVCHPV+  DGT +   ++G
Sbjct:  263 MGHDKLYAELMADSEALPDDAPPR-------TVVKLPTSGGVVQRSAQQRRQGRAARVREYFYGAPHAERRASPALTPTLLELRMDSVRVCRVGGTQLSGGLLPVGQAALLGPTRVSMVKP-SHDLLHAVLAVCHPVLKPDGTALVPGEEG 405          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.770e-21
Identity = 63/148 (42.57%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    4 DRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGR-----GLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQR-SALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFG 145
            DRLYA + + LP                V+ LPRSGGV  R +++RRA+R  R REYFYG               LSPA +   +  + ++RVGG  VS AMLPVG   S+L PL+   +   + DLLH VLAVCHPV+  DGT++ G
Sbjct:  264 DRLYADMVATLPR------------SVAVINLPRSGGVALRSSQYRRASRDRRCREYFYGXXXXXXXXXXXXAPALSPAALHLDFNDVSIFRVGGQTVSDAMLPVGHSDSSLGPLQVNPL-YPSSDLLHTVLAVCHPVLRQDGTMLGG 398          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.830e-20
Identity = 62/148 (41.89%), Postives = 80/148 (54.05%), Query Frame = 0
Query:    4 DRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGR-----GLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQR-SALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFG 145
            DRLYA + + LP                V+ LPRSGGV  R +++RRA+R  R REYFY                LSPA +   +  + ++RVGG  VS AMLPVG   S+L PL+       + DLLH VLAVCHPV+  DGT++ G
Sbjct:  264 DRLYADMVATLPR------------SVAVINLPRSGGVALRSSQYRRASRDRRCREYFYXXXXXXXXXXXXXAPALSPAALHLDFNDVSIFRVGGQTVSDAMLPVGHSDSSLGPLQVNPF-YPSSDLLHTVLAVCHPVLRQDGTMLGG 398          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A7S4HRL3_9STRA (Protein CLP1 homolog n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRL3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.310e-19
Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 0
Query:    1 MGADRLYAQLRS---------------DLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGR---GLSPAMVEYAWARLGVYRVGGDKVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHP 134
            MG DRLY+ L +               DLPA  T   G P      V+KLPRSGGVV+RD  FRRA R   +R YFYG       G      +P ++E  ++ L +YR+    +SAA+LPV  +   +P++      +T  L+HAV AVCHP
Sbjct:  320 MGHDRLYSMLTTHFRKRAEEEKSAIGEDLPAAVTKKKGQP-----KVIKLPRSGGVVSRDAAFRRACRSQSIRRYFYGDKIRSTEGNLTDRYTPFLMEVPFSDLRLYRLSSVSLSAALLPVSAKQTTEPVQLTLETNITPTLVHAVWAVCHP 466          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A1D1ZPU8_AUXPR (Uncharacterized protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZPU8_AUXPR)

HSP 1 Score: 88.6 bits (218), Expect = 5.480e-18
Identity = 60/139 (43.17%), Postives = 75/139 (53.96%), Query Frame = 0
Query:    1 MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGD-KVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIAD 138
            +G+DRL++QL SDL     A          +VVKL +SGGVVTR  + R+  RK RV EYFYGP       R L+PA        + VYRVGG  K   + LP+G  S  DPL+  RV    Q+LL+ VL V H    D
Sbjct:  184 VGSDRLHSQLSSDLATSSPA---------ISVVKLAKSGGVVTRTRELRQEARKVRVEEYFYGPT------RSLAPASQTLKLEGVEVYRVGGGPKAPPSALPIGATSVADPLKLARV-TNPQELLYTVLGVSHAPTPD 306          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A7S0SUX6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SUX6_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 8.350e-18
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 0
Query:    1 MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVG-GDKVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCH 133
            +G +RL+++L  D+       AGG GG    V KLP+SGGVV R  ++RR +R AR+REYFYG  AAG     LSP     A+  + ++RVG G +  ++ LP+G+ S+ DPLR   V   +  LL++VLAV H
Sbjct:  155 IGQERLHSELVRDMRGK---RAGGGGGRDVQVWKLPKSGGVVERSPEYRRKSRDARMREYFYG--AAG----DLSPHSHTAAFGHVSIFRVGSGPRAPSSALPIGKESSADPLRVSTVAP-SMSLLNSVLAVSH 278          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A1D2ACS2_AUXPR (Protein CLP1 homolog n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2ACS2_AUXPR)

HSP 1 Score: 88.6 bits (218), Expect = 1.040e-17
Identity = 60/139 (43.17%), Postives = 75/139 (53.96%), Query Frame = 0
Query:    1 MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGD-KVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIAD 138
            +G+DRL++QL SDL     A          +VVKL +SGGVVTR  + R+  RK RV EYFYGP       R L+PA        + VYRVGG  K   + LP+G  S  DPL+  RV    Q+LL+ VL V H    D
Sbjct:  288 VGSDRLHSQLSSDLATSSPA---------ISVVKLAKSGGVVTRTRELRQEARKVRVEEYFYGPT------RSLAPASQTLKLEGVEVYRVGGGPKAPPSALPIGATSVADPLKLARV-TNPQELLYTVLGVSHAPTPD 410          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A2P6U1V2_CHLSO (Protein CLP1 homolog n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U1V2_CHLSO)

HSP 1 Score: 84.3 bits (207), Expect = 2.680e-16
Identity = 57/134 (42.54%), Postives = 74/134 (55.22%), Query Frame = 0
Query:    1 MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGD-KVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAVCH 133
            +G +RLY+QL  +L     A           V+KLPRSGGVV R  + R+A RK RV EYFYG        + LSPA     +  L VYRVGG  +  ++ LP+G  S  DPL+  RV    Q+LL+ +LAV H
Sbjct:  232 VGDERLYSQLSGELKRTAPAV---------QVLKLPRSGGVVVRSRELRQAARKVRVEEYFYGNR------KELSPASQTARFEDLQVYRVGGGPRAPSSALPIGATSVADPLKLTRV-TNPQELLYTLLAVSH 349          
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Match: A0A218WCF4_PUNGR (Protein CLP1 homolog n=4 Tax=Punica granatum TaxID=22663 RepID=A0A218WCF4_PUNGR)

HSP 1 Score: 83.2 bits (204), Expect = 8.020e-16
Identity = 49/102 (48.04%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   31 NVVKLPRSGGVVTRDTKFRRATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGD-KVSAAMLPVGQRSALDPLRAERVPVLTQDLLHAVLAV 131
            +VVKL +SGGVV+R  KFR+ TR  R+REYFYGP      G  LSP      ++ L +YR+GG  +   + LP+G +S  DPLR   V +  +DLLH VLAV
Sbjct:  289 DVVKLQKSGGVVSRSNKFRQRTRSFRIREYFYGP------GNDLSPHANIANFSDLSIYRIGGGPQAPHSALPIGAKSVADPLRLAPVNI-NRDLLHVVLAV 383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XPS8_HETAK4.700e-102100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YJV7_9STRA1.260e-2647.68Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID... [more]
A0A6H5KLD2_9PHAE1.770e-2142.57Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LR58_ECTSI1.830e-2041.89Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S4HRL3_9STRA5.310e-1938.82Protein CLP1 homolog n=1 Tax=Odontella aurita TaxI... [more]
A0A1D1ZPU8_AUXPR5.480e-1843.17Uncharacterized protein (Fragment) n=1 Tax=Auxenoc... [more]
A0A7S0SUX6_9CHLO8.350e-1843.28Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A1D2ACS2_AUXPR1.040e-1743.17Protein CLP1 homolog n=3 Tax=Auxenochlorella proto... [more]
A0A2P6U1V2_CHLSO2.680e-1642.54Protein CLP1 homolog n=1 Tax=Chlorella sorokiniana... [more]
A0A218WCF4_PUNGR8.020e-1648.04Protein CLP1 homolog n=4 Tax=Punica granatum TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010655Pre-mRNA cleavage complex subunit Clp1, C-terminalPFAMPF06807Clp1coord: 74..138
e-value: 1.9E-7
score: 31.5
IPR038238Clp1, C-terminal domain superfamilyGENE3D2.40.30.330coord: 76..145
e-value: 2.0E-7
score: 33.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..66
e-value: 1.5E-10
score: 42.8
NoneNo IPR availablePANTHERPTHR12755:SF6POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1coord: 2..135
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0
IPR045116Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3PANTHERPTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pcoord: 2..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:4586943..4594304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.107.1mRNA_H-akashiwo_Contig1.107.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 4506115..4594304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.107.1 ID=prot_H-akashiwo_Contig1.107.1|Name=mRNA_H-akashiwo_Contig1.107.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=150bp
MGADRLYAQLRSDLPAPGTAAAGGPGGAGCNVVKLPRSGGVVTRDTKFRR
ATRKARVREYFYGPPAAGRPGRGLSPAMVEYAWARLGVYRVGGDKVSAAM
LPVGQRSALDPLRAERVPVLTQDLLHAVLAVCHPVIADDGTVVFGRDDGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010655Clp1_C
IPR038238Clp1_C_sf
IPR027417P-loop_NTPase
IPR045116Clp1/Grc3