prot_H-akashiwo_Contig1.104.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.104.1
Unique Nameprot_H-akashiwo_Contig1.104.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length129
Homology
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK)

HSP 1 Score: 260 bits (664), Expect = 5.290e-81
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    1 EKELARQLAAQPLPEYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            EKELARQLAAQPLPEYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG
Sbjct:  243 EKELARQLAAQPLPEYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 371          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: D8LRZ5_ECTSI (DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ5_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 4.650e-38
Identity = 66/109 (60.55%), Postives = 90/109 (82.57%), Query Frame = 0
Query:   21 FYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            + HKGG++EF++L+C++KQ L  D     +++A+G + GV+VEACL WS DMY+D L+SFANGI+T DGG+HL+GLK+ VTRTVN+ GRK+GKLK+  +NLGGDFVREG
Sbjct:  264 YLHKGGVQEFVELMCKEKQHLHPDMK---VIRALGERDGVQVEACLSWSSDMYTDSLVSFANGIRTGDGGTHLEGLKSIVTRTVNSMGRKSGKLKDSQSNLGGDFVREG 369          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A7S2RLA2_9STRA (DNA gyrase subunit B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLA2_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.180e-35
Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 0
Query:   17 REKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            R K F H+GGLEEF+ +LCE K  L  ++P   +++A G    V V+ CLRWS D YS+ LISFANGIKT DGG+H+DG++A +TRTVN+A RK GKLKE   NLGG+F+REG
Sbjct:  314 RRKEFLHRGGLEEFVQVLCEGKTLLHPEAP---VIRATGALNDVAVDVCLRWSSDQYSEQLISFANGIKTGDGGAHVDGVRAVLTRTVNSAARKEGKLKESAPNLGGEFIREG 423          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A4D9D639_9STRA (DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D639_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.070e-35
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 0
Query:   15 EYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            E R + F+H+GG+ E++ L+C  K+ L  D     ++ A G K GV VEA LRWS+D Y D+LI FANGI+T DGG+HLDGLK+ +TRT+N+  RKAGKLK+G  NL GDFVREG
Sbjct:  309 EGRRQEFFHEGGIREYVQLMCSSKEELHPDV---AVIHAAGEKNGVAVEAALRWSKDQYDDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTGDFVREG 420          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A835Z3N6_9STRA (DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.780e-32
Identity = 59/113 (52.21%), Postives = 84/113 (74.34%), Query Frame = 0
Query:   17 REKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            +++ ++H+GG+ E+++L+C +K  L  + P   ++ A G K GV VEACL WS DMYSD L+SFANGI+T DGG+HLD LK  +TRTVN  G+K GK+K+   ++GG+FVREG
Sbjct:  251 KQQEYFHQGGMREYVELMCTEKTCLHPEVP---VIVATGEKDGVAVEACLSWSSDMYSDCLVSFANGIRTADGGTHLDSLKQVITRTVNNLGKKNGKIKDSAGSIGGEFVREG 360          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A7S2YEI0_9STRA (DNA topoisomerase 2 (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YEI0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.740e-30
Identity = 61/140 (43.57%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   17 REKAFYHKGGLEEFLDLLCEDKQ------------------------PLS---TDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            R + FYH GGL E++D+LC+ K                         P+S   TD     L       +GV V   +RWS DMY++ ++SF N I+T DGGSH+DGLKAC+TRTVNA  +K+GK+KEG  NL G+F+REG
Sbjct:    4 RVRVFYHSGGLAEYVDVLCKTKSALFGVTTATRKKKKAKTSDVSELDPISHLLTDDGSTILCSGKADGSGVAVSVAMRWSSDMYTESILSFCNNIRTGDGGSHVDGLKACLTRTVNAIAKKSGKVKEGQGNLPGEFIREG 143          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A7S1XU47_9STRA (DNA topoisomerase 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU47_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.040e-28
Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = 0
Query:   17 REKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            R + F H GGLEE+L  +C+ K  +    P   +V A GT  G+EVE  LRWS++ YSD+ I FANGI+T DGG+HLDG+K  VTR VN+AG+KA K+K+ + ++  DF+ EG
Sbjct:  303 RHETFKHDGGLEEWLQSMCKGKDSIYEKVP---MVTARGTVEGIEVEVALRWSKEQYSDICIGFANGIRTGDGGTHLDGVKGAVTRLVNSAGKKANKIKKDEGSIARDFILEG 412          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A7S0D173_9EUKA (DNA topoisomerase 2 (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D173_9EUKA)

HSP 1 Score: 117 bits (294), Expect = 1.700e-28
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 0
Query:    8 LAAQPLPEYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            LA +   E +   F HKGG++E +  +C+ + PL +D      +   GTK G+EVE  ++WS+D YSD L+SFAN I+T DGG+H+DGL   +TR VN A RKAGK K+   N+GG+++REG
Sbjct:  355 LADKRSEEGKTSIFEHKGGIQEMVRDMCDGRSPLHSDL---SRLTFNGTKDGIEVEIAIQWSKDQYSDSLVSFANNIRTGDGGTHIDGLTRALTRVVNTAARKAGKRKQDAPNIGGEYIREG 473          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: D3JAL9_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Planktothrix paucivesiculata PCC 8954 TaxID=671069 RepID=D3JAL9_9CYAN)

HSP 1 Score: 113 bits (282), Expect = 1.810e-28
Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 0
Query:   17 REKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            R + + ++GG+ E++  +  DKQPL  D     ++   G ++ V++E  L+W  D YSD ++ FAN I+T DGG+HL+GLK  +TRT+NA  RK  KLKEGDANLGG+ +REG
Sbjct:  129 RVETYCYEGGIREYIAYMNNDKQPLHED-----IIYTCGERSNVQIEVALQWCTDAYSDTVLGFANNIRTIDGGTHLEGLKTVLTRTLNAIARKRNKLKEGDANLGGENIREG 236          
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Match: A0A7S1TKE7_9RHOD (DNA gyrase subunit B n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKE7_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 5.030e-28
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0
Query:   19 KAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGLVKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACVTRTVNAAGRKAGKLKEGDANLGGDFVREG 129
            + FYH+GGL E++  LC+ KQPL  D     L      K GVEVE  LRWS DM+++ ++ FAN I+T+ GGSH+DGLK  +TRTVN A +K G++K+G  NLGG+FVR G
Sbjct:  364 RVFYHEGGLREYVLHLCKGKQPLHPDPIYFAL-----EKDGVEVELALRWSSDMFTESVLGFANNIRTSGGGSHVDGLKMALTRTVNTAAKKFGRVKDGQPNLGGEFVRVG 469          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XY21_HETAK5.290e-81100.00DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo ... [more]
D8LRZ5_ECTSI4.650e-3860.55DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2RLA2_9STRA3.180e-3558.41DNA gyrase subunit B n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D639_9STRA8.070e-3556.52DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID... [more]
A0A835Z3N6_9STRA2.780e-3252.21DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2YEI0_9STRA1.740e-3043.57DNA topoisomerase 2 (Fragment) n=1 Tax=Amphiprora ... [more]
A0A7S1XU47_9STRA1.040e-2850.44DNA topoisomerase 2 n=1 Tax=Phaeomonas parva TaxID... [more]
A0A7S0D173_9EUKA1.700e-2846.72DNA topoisomerase 2 (Fragment) n=1 Tax=Amorphochlo... [more]
D3JAL9_9CYAN1.810e-2846.90DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A7S1TKE7_9RHOD5.030e-2852.25DNA gyrase subunit B n=1 Tax=Erythrolobus australi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000565DNA topoisomerase, type IIA, subunit BPRINTSPR01159DNAGYRASEBcoord: 25..47
score: 26.09
coord: 52..70
score: 25.26
coord: 123..129
score: 26.08
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 24..129
e-value: 3.9E-21
score: 77.3
IPR013506DNA topoisomerase, type IIA, subunit B, domain 2PFAMPF00204DNA_gyraseBcoord: 26..129
e-value: 1.8E-20
score: 73.1
NoneNo IPR availablePANTHERPTHR45866:SF1DNA GYRASE SUBUNIT B, MITOCHONDRIALcoord: 17..129
NoneNo IPR availablePANTHERPTHR45866DNA GYRASE/TOPOISOMERASE SUBUNIT Bcoord: 17..129
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 25..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:4466557..4481240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.104.1mRNA_H-akashiwo_Contig1.104.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 4466557..4481240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.104.1 ID=prot_H-akashiwo_Contig1.104.1|Name=mRNA_H-akashiwo_Contig1.104.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=129bp
EKELARQLAAQPLPEYREKAFYHKGGLEEFLDLLCEDKQPLSTDSPGDGL
VKAVGTKAGVEVEACLRWSRDMYSDMLISFANGIKTNDGGSHLDGLKACV
TRTVNAAGRKAGKLKEGDANLGGDFVREG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000565Topo_IIA_B
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR013506Topo_IIA_bsu_dom2
IPR020568Ribosomal_S5_D2-typ_fold