mRNA_H-akashiwo_Contig995.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig995.6.1
Unique NamemRNA_H-akashiwo_Contig995.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 627 bits (1617), Expect = 3.170e-223
Identity = 301/351 (85.75%), Postives = 330/351 (94.02%), Query Frame = 2
Query:  446 MELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLGGDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFERHQRVLHHGF 1498
            MELHDHL SLGF+RSGHESCLY+ R+G +ELMVAVYVDDLV+SGSS A+VS+FKQSLASKY LTDQGELTQILGIKVVRDKR+KCF+LSQTSFIKDAL KFGLDYLPAC TP+DHTV+LTPTP FKAELSDAN+YRSMVGTLAWV NWTRPELAFTVHKLQRTQ +PEPK+FEA +RAFRYLKGT SESLRLGGDLVLRAFSDSDF +DR+DGKSVTGY+LFLGDAPIVWSS LQGAVTTSTVEAEYLALRS+VKDIMWLR LL ++GC Q EPTPVVEDNS C+EWAND++++++NRHFHVSYHLAKEQVSLGTIRMF+IKTHDQVADI TKALNA NFERHQRVLHHGF
Sbjct:    1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHGF 351          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 488 bits (1256), Expect = 1.010e-169
Identity = 233/268 (86.94%), Postives = 256/268 (95.52%), Query Frame = 2
Query:  188 EFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYL 991
            +FG+D+ QTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMT+DVYVRQPP YVDP+HP+KVWKLNKALYGL+QSPRVWYMELHDHL SLGF+RSGHESCLY+ R+G +ELMVAVYVDDLV+SGSS A+VS+FKQSLASKY+LTDQGELTQILGIKVVRDKR+KCF+LSQTSFIKDAL KFGLDYLPAC TP+DHTV+LTPTP FKAELSDAN+YRSMVGTLAWV NWTRPELAFTVHKLQRTQ +PEPK+FEA +RAFRYL
Sbjct:    1 KFGIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 399 bits (1026), Expect = 1.420e-125
Identity = 202/470 (42.98%), Postives = 304/470 (64.68%), Query Frame = 2
Query:  101 LAGC---CQRKFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSS-ELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDH--TVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLGGDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAEN-FERHQRVLH 1489
            + GC     +K+DADG+L K+KARL AQGY+   GVDY  T+SPVV++ASLR +L I+A++   +  +DI TAFL+G + ED+Y++QP GY  P    KV KL K+LYGL+Q+P+ WY  L+  LL  G+ R+G++SC+Y +   +  + +++VYVDD+V++ S  + +S  K++++  Y+++D GE+  ILGIKV RD+  +   LSQ SFI++A  KF +        P++    VN+    S +    +A  +RS+VGT+ W+  WT PE+A+++H L +    P      A+    RYL  T  + + LGG L L A++D+DF S+R  G+S +G+ +FLG +PI+WSS +Q  VT +T EAEY++LR++V D+MWL+ LL  LG ++Q   P+ EDN  CI WAND  +S+  RH HVSYH  KE V    I + ++ T  Q+AD+FTK L+  N F++  RVLH
Sbjct:  527 IVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLG-YKQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLH 995          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A2N9IXX5_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IXX5_FAGSY)

HSP 1 Score: 347 bits (890), Expect = 1.240e-106
Identity = 181/466 (38.84%), Postives = 282/466 (60.52%), Query Frame = 2
Query:  101 LAGC---CQRKFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLG-GDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFERHQRVL 1486
            L GC    + K ++DG + ++KARLVA+GY  + G+DY +T+SPVV  A++RL+L+I+A + +++  LD+S AFL+G + E+VY++QPPG++DP++P  V +L KALYGL+Q+PR W+     HLL++GF  S  +  L++ R+GS+ + + +YVDD++V+G+ P +V      LA ++D+ D G+L   LG+++  D R   F++ Q  +  D L KF +     C+TP      +         LSD   +RSMVG L ++  +TRP+L++ V+ + +  H P   +  AA+R  RY++GTL   L    G L L AF+DSD+  D +D +S TG ++FLG  PI W S  Q  V  S+ EAEY AL +   D+ W+R +L DLG F   P  +  DN + +  A + V   + +H  V YH  +E+V+   +++  I T DQ+ADI TKAL +  F   Q  L
Sbjct:  417 LVGCRWVYKLKRNSDGSIARYKARLVAKGYHQQQGMDYDETFSPVVKPATVRLILSIAAQQNWSLKQLDVSNAFLHGLLKENVYMQQPPGFIDPQYPKHVCQLQKALYGLKQAPRAWFERFTSHLLTMGFTPSLADPSLFLYRQGSTVVYLLLYVDDIIVTGNQPTVVQSLITKLAQEFDIKDLGQLKFFLGLQI--DYRSSGFFVHQQKYATDLLAKFNMSTCKPCSTPFVSLSRIRKDDGIP--LSDPTPFRSMVGGLQYL-TFTRPDLSYAVNHICQFMHQPTDHHLVAAKRILRYVQGTLHHGLTFRPGPLSLTAFTDSDWAGDPMDRRSTTGLIVFLGHNPITWQSKKQPTVARSSTEAEYRALANCAADLAWVRMVLKDLGIFLHAPPTIWCDNLSALALATNPVFHARTKHVEVDYHFIREKVTNRDLQLHHISTDDQLADILTKALPSPRFRYLQDKL 877          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A2N9H3I2_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H3I2_FAGSY)

HSP 1 Score: 337 bits (864), Expect = 1.430e-106
Identity = 177/466 (37.98%), Postives = 277/466 (59.44%), Query Frame = 2
Query:  101 LAGC---CQRKFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLG-GDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFERHQRVL 1486
            L GC    + K ++DG + ++KARL A+GY  + G+DY +T+SPVV  A++RL+L+I+A + +++  LD+S AFL+G + E+VY++QPPG++DP++P  V +L KALYGL+Q+P  W+     HLL++GF  S     L++ R+GS+ + + +YVDD++V+G+ P  +      LA ++D+ D G+L   LG+++  D R   F++ Q  +  D L KF +     C+TP      +         L D   +RSMVG L ++  +TRP+L++ V+ + +  H P   +  AA+R  RY++GTL   L    G L L AF+DSD+  D +D +S TG ++FLG  PI W S  Q  V  S+ EAEY AL +   D+ W+R +L DLG F   P  +  DN + +  A + V   + +H  V YH  +E+V+   +++  I T DQ+ADI TKAL +  F   Q  L
Sbjct:   68 LVGCRWVYKLKRNSDGSIARYKARLDAKGYHQQQGMDYDETFSPVVKPATVRLILSIAAQQNWSLKQLDVSNAFLHGLLKENVYMQQPPGFIDPQYPKHVCQLQKALYGLKQAPCAWFERFTSHLLTMGFTPSLANPSLFLYRQGSTVVYLLLYVDDIIVTGNQPTAIQSLITKLAQEFDIKDLGQLKFFLGLQI--DYRSSGFFVHQHKYATDLLAKFNMSTCKPCSTPFVSLSRIRKDDGIP--LPDPTPFRSMVGGLQYL-TFTRPDLSYAVNHICQFMHQPTDHHLVAAKRILRYVQGTLHHGLTFRPGPLSLTAFTDSDWAGDPMDRRSTTGLIVFLGHNPITWQSKKQPTVARSSTEAEYRALANCAADLAWVRMVLKDLGIFLHAPPTIWCDNLSALALATNPVFHARTKHVEVDYHFIREKVTNRDLQLHHISTDDQLADILTKALPSPRFRYLQDKL 528          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A5H2XKG5_PRUDU (BURP domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XKG5_PRUDU)

HSP 1 Score: 332 bits (852), Expect = 5.270e-105
Identity = 168/451 (37.25%), Postives = 272/451 (60.31%), Query Frame = 2
Query:  122 KFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVR-REGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRL--GGDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1465
            K + DG + KHKARLV +GY  + G+D+ +T++PV    ++R L+A++A KG+ +  LD+ +AFLNG + E+VYV QP G+V   + DKV+KL KALYGL+Q+PR WY E++ +L+S G+ RS  E+ LY + +E S  L+V++YVDD+V +GSS  L+ +FK  +  +Y++TD G L   LG+ V++   + C +++Q  +    L KFGL      +TP+  T  L       ++ +D N YR +VG+L ++   TRP++ F    L R  H P  K++  A+R  RY++GT+   +    G + +L  + DSD+   + D +S +GY    G     W+S  Q +V  ST EAEY++   +    +WLR +L D G  Q + TP++ DN++ I    + V  +K +H +  YH  ++ +  G + + + ++ +QVADIFTKAL+ + F
Sbjct:   56 KLNLDGSIQKHKARLVVKGYAQKPGIDFNETFAPVARLDTIRTLIALAAQKGWKLYQLDVKSAFLNGVLKEEVYVDQPDGFVTTNYEDKVYKLKKALYGLKQAPRAWYEEINAYLVSCGYVRSTSEATLYCKTKEDSGTLIVSIYVDDIVYTGSSEELIDEFKTEMMRRYEMTDLGLLYHFLGMAVIQT--ESCIFINQKKYALTLLDKFGLKQCKPVSTPLVATEKLCKDDG--SDPADENEYRQIVGSLLYLTA-TRPDIMFAASLLARFMHCPTKKHYGTAKRVLRYIQGTIDFGIEYQKGKEAILIGYCDSDWGGSQDDMRSTSGYAFSFGSGVFSWASVKQHSVALSTTEAEYVSASEATTQAIWLRFVLEDFGELQTDATPLMVDNTSAIAMTRNPVFHQKTKHINRRYHFIRDALQDGVVDLRYCRSEEQVADIFTKALSKDRF 501          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A4Y1R7D4_PRUDU (Multidrug resistance-associated protein 9 n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7D4_PRUDU)

HSP 1 Score: 338 bits (866), Expect = 7.770e-105
Identity = 176/457 (38.51%), Postives = 276/457 (60.39%), Query Frame = 2
Query:  122 KFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRL--GGDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFERHQRVL 1486
            K + DG + K+KARLVA+GY+ + G+D+ +T++PV    ++R L+A++A K + +  LD+ +AFLNG ++E+VYV QP G+V     DKV++L KALYGL+Q+PR WY E++ H   +GFQRS  E+ LY +R  S  L+V++YVDD++  GSS  ++ +FK  +  +Y++TD G L   LG+ V++   D C +L Q  + K  L KFGL    + ATP+     L+      ++L+D  +YR MVG+L ++   TRP++ F    L R  H+P  K+   A+R  RY++GT+S  +    G   VL  + DSD+N    D +S +GY   LG     W+S  Q +V  ST EAEY++   +    +WLR +L+D G  Q EPT ++ DN++ I  + + +   K RH +  +H  ++ +  G I + + KT +QVADIFTK L  + +E  ++ L
Sbjct:  249 KLNLDGSVQKNKARLVAKGYSQKPGIDFNETFAPVARLDTVRALVALAAQKNWKLFQLDVKSAFLNGVLSEEVYVDQPLGFVIQGSEDKVYRLKKALYGLKQAPRAWYEEINSHFTKVGFQRSLSEATLYTKRSPSGILIVSLYVDDIIYIGSSKEMMLEFKNEMMRQYEMTDLGLLHHFLGLGVLQT--DSCIFLHQKKYAKTLLDKFGLKDCKSIATPLAVNEKLSKVDG--SDLADETLYRQMVGSLLYLTA-TRPDIMFASSLLARFMHNPTKKHMGTAKRVLRYIQGTISYGIAYEKGKGAVLIGYCDSDWNGSEDDMRSTSGYAFNLGSGVFSWASIKQSSVALSTAEAEYMSAAEATTQAVWLRFVLSDFGEEQVEPTQLLCDNTSAIAISKNPIHHHKTRHINRRFHFIRDALQNGEIDLLYCKTEEQVADIFTKPLARDRYEYLRKAL 700          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A2N9FV76_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FV76_FAGSY)

HSP 1 Score: 335 bits (858), Expect = 1.940e-104
Identity = 170/449 (37.86%), Postives = 276/449 (61.47%), Query Frame = 2
Query:  122 KFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLG-GDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1465
            K   DG + ++KARLVA+G   + G+DY +T+SPVV  A++RL+L+++A   +++  LD+S AFL+GA+ E VY+RQP G++DP+ P  +  L K+LYGLRQ+PR W+ +   H LSLGF  S  +S L++ R+G + L + +YVDD++++GS    +++   +LAS ++L D G LT  LG+++  D +   F++ QT +  D LT+  +     C+TP     +   + S    LSD  ++RS+VG L ++  +TRP+L++ V+ L +  H P   +  AA+R  RY++GT+S  +    G + L AF+D+D+  + +D +S T +++FLG+  I WSS  Q  V  S+ EAEY +L     ++ WLR LL D G F   P  +  DN + I  A++ V   + +H  + YH  +E+V  G +++ +I T DQ+AD+ TKAL +  F
Sbjct:  181 KRHPDGSVARYKARLVAKGNHQQAGIDYDETFSPVVKPATVRLVLSLAAQNKWSLRQLDVSNAFLHGALKERVYMRQPVGFIDPQFPSHICSLQKSLYGLRQAPRAWFEKFSTHFLSLGFTASQSDSSLFIFRQGPTVLYLLLYVDDIILTGSHQDAITELVAALASVFELKDLGRLTYFLGLQI--DYQSNGFFVHQTKYALDILTRHNMSTTKPCSTPF--VSSSRDSSSDSTPLSDPYIFRSLVGALQYL-TFTRPDLSYAVNSLCQHMHRPSVAHLVAAKRVLRYVRGTISCGILFQPGPMSLTAFTDADWAGNPVDRRSTTAFLVFLGNNLITWSSKKQSTVARSSTEAEYRSLAVGAAELAWLRMLLCDFGIFLNSPPIIWCDNLSAISLASNPVFHARTKHVEIDYHFVRERVIRGDLKVHYIPTEDQLADLLTKALPSPRF 624          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A151UDQ7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UDQ7_CAJCA)

HSP 1 Score: 330 bits (845), Expect = 2.420e-104
Identity = 170/450 (37.78%), Postives = 271/450 (60.22%), Query Frame = 2
Query:  122 KFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLGGD--LVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENF 1465
            K  +DG + ++KARLVA+G+T E+G+DY +T++PV    SLR LLAI+A+K + +D +D+  AFLNG +  +VY++ PPGY  P H  KV +L KALYGL+Q+PR W+ + HD +  LGF  S +++ L++RR     +++ +YVDD++++G     +S+ KQ L   +++ D G L+  LGI+++    D   +LSQ  +  D +++ GL      +TP++   + TP       L D  +YR +VG+L ++   TR  +A+ VH + +    P   +F A  R   Y+KGT+   L    D  L+LRA+ D+D+  D  D +SVTG+ +FLGD+ I W S  Q  V  S+ EAEY A+  +  +I+W+R LL DLG  Q  PT +  DN + I+ A++ V   + +H  +  H+ ++QV  GT+ +  I T DQ A++ TKA +  +F
Sbjct:   35 KTYSDGSIERYKARLVARGFTQEYGIDYEETFAPVARLTSLRTLLAIAASKKWFIDQMDVKNAFLNGDLDAEVYMQPPPGYSCPPH--KVCRLRKALYGLKQAPRSWFAKFHDTIAQLGFTSSTYDNALFIRRNDHGTVILLLYVDDMIITGDDSNGISELKQFLNLHFEMKDLGSLSYFLGIQIL--SCDDGLFLSQAKYASDLISRAGLTDCKTESTPLETRAHFTPLDG--TPLEDPTLYRQLVGSLIYL-TVTRTNIAYVVHLVSQFMCAPRSTHFAAVLRIIIYIKGTIFHGLHYSVDSPLILRAYLDADWGGDPTDRRSVTGFCIFLGDSLISWRSKKQQLVARSSTEAEYRAMADTTSEIVWIRWLLGDLGFPQSSPTDLFCDNRSAIQIAHNDVFHERTKHIEIDCHITRQQVVRGTLHLISISTIDQPANLLTKAHHPGHF 477          
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Match: A0A8J5YN71_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YN71_9ROSI)

HSP 1 Score: 334 bits (856), Expect = 5.710e-104
Identity = 180/470 (38.30%), Postives = 277/470 (58.94%), Query Frame = 2
Query:   86 RMLLELAGCCQRKFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDKVWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGS-SELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSDANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRYLKGTLSESLRLGGDLVLR--AFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWSSNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDNSTCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAENFERHQRVL 1486
            R ++ +    + K +ADG L K KARLV +G++ ++G+DY +T++PV    ++RLL+A++A   + +  LD+ +AFLNG + E++YV QP G+  P   D V++L KALYGL+Q+PR WY  +  +L+ LGF+RS  E  LYV++E S ++L+V VYVDDL+V+G   A+++DFK  +   + ++D GE+T  LG++V + +    F+LSQ +F    L KF +    A +TP+   V    T    +E      YRS++G L ++   TRP++ F V  L R  H     +F AA+R  RY+KGTLS  +       LR   ++DSD+   + D K+ +GY   LG A   WSS  Q  V  STVEAEY+A   +V   +WLR +L DL  +Q+E T +  DN + +  A + V   + +HF++  H+ +E      I +    + DQVADIFTKAL    F + ++ L
Sbjct:  183 RKVIGVKWVYRAKQNADGSLNKLKARLVVKGFSQKYGLDYMETFAPVARLDTIRLLVALAAQMEWKIHQLDVKSAFLNGYLEEEIYVEQPEGFKVPHKEDMVYRLKKALYGLKQAPRAWYSRIDSYLVGLGFERSLSEPTLYVKKENSKTQLIVFVYVDDLLVTGGDQAMLADFKTKMHQMFQMSDLGEMTYFLGMEVTQSQAG--FFLSQRTFAIKILDKFSIQNCKATSTPV--AVGERLTSQSNSEKVYETTYRSLIGCLLYLTA-TRPDIMFAVSLLSRFMHYYNEDHFRAAKRVLRYIKGTLSYGMYYNNARKLRLIGYTDSDWAGSKDDLKNTSGYAFTLGSAMFCWSSKKQSIVAQSTVEAEYVAAAGAVNQAIWLRKILGDLNLYQKEATEIYCDNMSAVAIAKNPVFHGRTKHFNIKLHVVREMEQAREIELVHCNSEDQVADIFTKALCTSRFIKLRKEL 647          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig995.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK3.170e-22385.75Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK1.010e-16986.94Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK1.420e-12542.98Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2N9IXX5_FAGSY1.240e-10638.84CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
A0A2N9H3I2_FAGSY1.430e-10637.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5H2XKG5_PRUDU5.270e-10537.25BURP domain-containing protein n=1 Tax=Prunus dulc... [more]
A0A4Y1R7D4_PRUDU7.770e-10538.51Multidrug resistance-associated protein 9 n=2 Tax=... [more]
A0A2N9FV76_FAGSY1.940e-10437.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151UDQ7_CAJCA2.420e-10437.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J5YN71_9ROSI5.710e-10438.30Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig995contigH-akashiwo_Contig995:264997..266503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog50452.A0A087HQI6
PFAMsRVT_2,Retrotran_gag_2,gag_pre-integrs,rve
Model size1507
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.13e-97
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37RIF@33090|Viridiplantae,3G9AM@35493|Streptophyta
Descriptioncysteine-rich RLK (RECEPTOR-like protein kinase) 8
Cds size1419
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388070.820999-CDS-H-akashiwo_Contig995:264996..2664151681388070.820999-CDS-H-akashiwo_Contig995:264996..266415Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig995 264997..266415 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388070.8329709-UTR-H-akashiwo_Contig995:266415..2665031681388070.8329709-UTR-H-akashiwo_Contig995:266415..266503Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig995 266416..266503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig995.6.1prot_H-akashiwo_Contig995.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig995 264997..266415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig995.6.1

>prot_H-akashiwo_Contig995.6.1 ID=prot_H-akashiwo_Contig995.6.1|Name=mRNA_H-akashiwo_Contig995.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=473bp
MLLELAGCCQRKFDADGHLVKHKARLVAQGYTLEFGVDYCQTYSPVVNAA
SLRLLLAISANKGYAVDSLDISTAFLNGAMTEDVYVRQPPGYVDPEHPDK
VWKLNKALYGLRQSPRVWYMELHDHLLSLGFQRSGHESCLYVRREGSSEL
MVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDK
RDKCFYLSQTSFIKDALTKFGLDYLPACATPMDHTVNLTPTPSFKAELSD
ANMYRSMVGTLAWVENWTRPELAFTVHKLQRTQHDPEPKYFEAAERAFRY
LKGTLSESLRLGGDLVLRAFSDSDFNSDRIDGKSVTGYVLFLGDAPIVWS
SNLQGAVTTSTVEAEYLALRSSVKDIMWLRHLLADLGCFQQEPTPVVEDN
STCIEWANDLVISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIF
TKALNAENFERHQRVLHHGFSA*
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mRNA from alignment at H-akashiwo_Contig995:264997..266503-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig995.6.1 ID=mRNA_H-akashiwo_Contig995.6.1|Name=mRNA_H-akashiwo_Contig995.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1507bp|location=Sequence derived from alignment at H-akashiwo_Contig995:264997..266503- (Heterosigma akashiwo CCMP452)
CCTGCATGGCGGGATGCTATTGATGGCGAGCTGAACAGTATCACTGACAA GAACACCTACACTCTGGTTGACCGTCCTCCTAACGCGAATGTTATTGGAA CTCGCTGGGTGCTGTCAAAGAAAATTCGACGCCGATGGTCACTTGGTTAA GCACAAAGCCAGATTGGTTGCTCAGGGCTACACTTTGGAGTTTGGTGTTG ATTATTGCCAGACATACTCGCCCGTTGTCAACGCGGCCAGTCTTAGGCTA CTGCTTGCTATCTCCGCGAACAAGGGCTATGCAGTTGACTCTCTAGACAT TAGTACGGCCTTTCTGAATGGGGCTATGACCGAAGATGTTTACGTACGAC AACCGCCGGGTTATGTAGATCCTGAGCATCCCGATAAGGTTTGGAAACTG AACAAAGCTCTGTACGGGTTGCGCCAGAGCCCAAGGGTCTGGTATATGGA GTTGCATGATCATCTCTTGTCTCTGGGTTTTCAGCGTAGCGGGCATGAGT CCTGCTTGTACGTTCGTCGCGAAGGGAGCAGTGAGTTGATGGTGGCTGTA TACGTTGACGATCTAGTGGTTAGTGGCAGCTCTCCGGCTCTTGTCTCTGA TTTCAAGCAATCTCTTGCATCCAAGTACGATCTCACCGATCAGGGGGAAC TTACTCAAATCCTCGGCATCAAGGTTGTTCGGGACAAGCGCGACAAGTGC TTCTATCTCTCCCAAACCTCTTTCATTAAGGACGCGCTAACCAAGTTCGG GCTCGATTATCTGCCTGCGTGTGCGACGCCTATGGACCACACTGTGAATC TGACGCCTACCCCCAGCTTCAAGGCCGAACTCTCTGACGCGAATATGTAC AGATCTATGGTTGGTACGTTAGCCTGGGTTGAGAACTGGACGAGGCCGGA GCTAGCCTTTACGGTTCACAAGCTTCAGCGCACTCAGCATGACCCGGAGC CCAAGTATTTCGAGGCGGCCGAGCGTGCATTTCGTTATCTTAAGGGTACT CTGTCTGAGTCATTGCGCCTGGGTGGTGATCTGGTGCTACGTGCGTTCTC TGATTCGGATTTCAACTCTGACCGTATTGATGGCAAGTCGGTTACAGGCT ACGTTCTGTTTCTAGGTGACGCGCCTATCGTTTGGTCCTCAAACCTTCAA GGGGCGGTCACTACCTCCACAGTGGAAGCGGAGTATCTCGCTCTTCGGTC GTCAGTCAAAGACATTATGTGGCTCCGCCATCTTCTTGCTGATCTTGGGT GCTTCCAGCAGGAGCCTACTCCTGTTGTAGAGGACAATAGTACCTGCATT GAATGGGCGAATGACTTAGTGATCTCCAGAAAGAATAGGCATTTCCATGT GTCCTATCATCTTGCTAAGGAGCAAGTGAGCCTTGGGACTATCAGAATGT TCTTCATTAAAACTCATGACCAGGTGGCTGATATTTTTACCAAAGCTCTC AATGCAGAAAATTTTGAAAGGCACCAGAGGGTGCTGCATCATGGTTTCAG TGCCTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig995:264997..266503-

>mRNA_H-akashiwo_Contig995.6.1 ID=mRNA_H-akashiwo_Contig995.6.1|Name=mRNA_H-akashiwo_Contig995.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1419bp|location=Sequence derived from alignment at H-akashiwo_Contig995:264997..266503- (Heterosigma akashiwo CCMP452)
ATGTTATTGGAACTCGCTGGGTGCTGTCAAAGAAAATTCGACGCCGATGG
TCACTTGGTTAAGCACAAAGCCAGATTGGTTGCTCAGGGCTACACTTTGG
AGTTTGGTGTTGATTATTGCCAGACATACTCGCCCGTTGTCAACGCGGCC
AGTCTTAGGCTACTGCTTGCTATCTCCGCGAACAAGGGCTATGCAGTTGA
CTCTCTAGACATTAGTACGGCCTTTCTGAATGGGGCTATGACCGAAGATG
TTTACGTACGACAACCGCCGGGTTATGTAGATCCTGAGCATCCCGATAAG
GTTTGGAAACTGAACAAAGCTCTGTACGGGTTGCGCCAGAGCCCAAGGGT
CTGGTATATGGAGTTGCATGATCATCTCTTGTCTCTGGGTTTTCAGCGTA
GCGGGCATGAGTCCTGCTTGTACGTTCGTCGCGAAGGGAGCAGTGAGTTG
ATGGTGGCTGTATACGTTGACGATCTAGTGGTTAGTGGCAGCTCTCCGGC
TCTTGTCTCTGATTTCAAGCAATCTCTTGCATCCAAGTACGATCTCACCG
ATCAGGGGGAACTTACTCAAATCCTCGGCATCAAGGTTGTTCGGGACAAG
CGCGACAAGTGCTTCTATCTCTCCCAAACCTCTTTCATTAAGGACGCGCT
AACCAAGTTCGGGCTCGATTATCTGCCTGCGTGTGCGACGCCTATGGACC
ACACTGTGAATCTGACGCCTACCCCCAGCTTCAAGGCCGAACTCTCTGAC
GCGAATATGTACAGATCTATGGTTGGTACGTTAGCCTGGGTTGAGAACTG
GACGAGGCCGGAGCTAGCCTTTACGGTTCACAAGCTTCAGCGCACTCAGC
ATGACCCGGAGCCCAAGTATTTCGAGGCGGCCGAGCGTGCATTTCGTTAT
CTTAAGGGTACTCTGTCTGAGTCATTGCGCCTGGGTGGTGATCTGGTGCT
ACGTGCGTTCTCTGATTCGGATTTCAACTCTGACCGTATTGATGGCAAGT
CGGTTACAGGCTACGTTCTGTTTCTAGGTGACGCGCCTATCGTTTGGTCC
TCAAACCTTCAAGGGGCGGTCACTACCTCCACAGTGGAAGCGGAGTATCT
CGCTCTTCGGTCGTCAGTCAAAGACATTATGTGGCTCCGCCATCTTCTTG
CTGATCTTGGGTGCTTCCAGCAGGAGCCTACTCCTGTTGTAGAGGACAAT
AGTACCTGCATTGAATGGGCGAATGACTTAGTGATCTCCAGAAAGAATAG
GCATTTCCATGTGTCCTATCATCTTGCTAAGGAGCAAGTGAGCCTTGGGA
CTATCAGAATGTTCTTCATTAAAACTCATGACCAGGTGGCTGATATTTTT
ACCAAAGCTCTCAATGCAGAAAATTTTGAAAGGCACCAGAGGGTGCTGCA
TCATGGTTTCAGTGCCTGA
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