mRNA_H-akashiwo_Contig992.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 280 bits (716), Expect = 2.640e-92 Identity = 131/172 (76.16%), Postives = 152/172 (88.37%), Query Frame = 1 Query: 130 TAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPG 645 TAFLNG + DVYVRQPP +VDP HPNKVWKLNKAL GL+QSPR+WY++LHDHL S GF+RSG ESCLY+ RD G ELMVAVYVDDLVISGS+ A+VS+FKQSLASKY+LTD GEL+QILGIK+ +D+ KCF+L QTSFIKDA++KFGLDYLPAC+TP+DHT DLTPTPG Sbjct: 40 TAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDG-GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPG 210
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 271 bits (693), Expect = 6.750e-87 Identity = 140/270 (51.85%), Postives = 167/270 (61.85%), Query Frame = 1 Query: 4 EALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDADG-------------------------------------------------------TAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGE-LMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPG 645 +A+ E+ S+ L DLPPGA+ IGTRW+LSKKFDADG TAFLN DIDGDVYV+QPPGFVD HP+KVWKL KAL GLRQSPR+WY LH+ LL Q F RS ESCLY R++S GE MVAVYVDDLV+S + P++VS K S S++ +TD+G L+ ILGIK+++D KCFYL Q SF++DAISKFGLDYLPACRTPM + DLTPTPG Sbjct: 131 QAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKYKARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPG 400
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK) HSP 1 Score: 205 bits (522), Expect = 5.740e-61 Identity = 111/225 (49.33%), Postives = 133/225 (59.11%), Query Frame = 1 Query: 7 ALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDADG-------------------------------------------------------TAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGE-LMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQD 513 A+ E+GS+ + L DLPPGANVIGTRWVLSKKFDADG TAFLN DIDGDVYV+QPPGFVD HP+KVWKL KAL GLRQSPR+WY LH+ LL Q F RS ESCLY R++S GE MVAVYVDDLV+S + P++VS K S S++ +TD+G L+ ILGIK+++D Sbjct: 203 AMLKELGSMESHDVKELVDLPPGANVIGTRWVLSKKFDADGNLQKYKARLVAQGFTQREGVDFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRD 427
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 197 bits (500), Expect = 1.600e-58 Identity = 94/125 (75.20%), Postives = 110/125 (88.00%), Query Frame = 1 Query: 271 LQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPG 645 ++LHDHL S GF+RSG ESCLY+ RD G ELMVAVYVDDLVISGS+ A+VS+FKQSLASKY LTD GEL+QILGIK+ +D+ KCF+L QTSFIKDA++KFGLDYLPAC+TP+DHT DLTPTPG Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDG-GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPG 124
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 170 bits (430), Expect = 4.280e-45 Identity = 89/265 (33.58%), Postives = 143/265 (53.96%), Query Frame = 1 Query: 1 QEALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDADG-------------------------------------------------------TAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMDHTADL 630 +EA+ E SL + N + L D P GAN++G RW+L+KK+DADG TAFL+G ++ D+Y++QP G+ P +KV KL K+L GL+Q+P+ WY L+ LL QG+ R+G +SC+Y + S+GG+ +++VYVDD+V++ S + +S K++++ Y+++DMGE+ ILGIK+ +DR + L Q SFI++A KF + P++ D+ Sbjct: 500 REAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDV 764
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: T1YX80_9ROSI (CRK n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=T1YX80_9ROSI) HSP 1 Score: 155 bits (391), Expect = 2.160e-43 Identity = 78/216 (36.11%), Postives = 128/216 (59.26%), Query Frame = 1 Query: 1 QEALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDADGTAFLNGDIDGD-VYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMDHTADLTPTPG 645 +EA++ EM S+ N + L D PPG IG +W+ KK FLNGD++ + VY++QP GF+ +KV KL K+L GL+Q+P+ W+ + D +L+ GF+ + + C+Y R D++G E+++ +YVDD++I G+ V K L+SK+ + D+GE IL I+I +D+ L Q+ +++ + +F + P TPMD +A P G Sbjct: 30 KEAINDEMDSIMINNIWILVDSPPGCKPIGCKWIFKKKMRV---VFLNGDLEEEEVYMKQPEGFILSGQAHKVCKLVKSLYGLKQAPKQWHQKFDDVVLANGFRLNQSDKCVYSRFDNNGHEVIICLYVDDMIIFGTELEQVKKTKNFLSSKFSMKDLGEADVILDIRIKRDQ--GSITLSQSHYVEKVLKRFDVFESPPTSTPMDCSAKFAPNSG 240
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A2N9GV98_FAGSY (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV98_FAGSY) HSP 1 Score: 163 bits (413), Expect = 8.940e-43 Identity = 84/237 (35.44%), Postives = 133/237 (56.12%), Query Frame = 1 Query: 7 ALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDADG----------------------------TAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMDHTADLT 633 A+ EM S+ K N + L DLPPG IG +WVL K ADG TAFLNG++D ++Y+ QP GF H KV +L +++ GL+QS R WYL+ HD + S GF+ ++ C+Y++R S L++++YVDD++++G+ + K+ L+S +++ DMGE + +LG+KIT+DR +K L Q ++IK + +F + TPM+ L+ Sbjct: 586 AMQKEMSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSIDRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKVCRLKRSIYGLKQSSRQWYLRFHDSITSFGFEMIEEDHCVYLKR-SKRSILILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHSSKPIDTPMEKGCTLS 821
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A2N9G8K6_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G8K6_FAGSY) HSP 1 Score: 152 bits (383), Expect = 1.810e-42 Identity = 80/227 (35.24%), Postives = 125/227 (55.07%), Query Frame = 1 Query: 22 MGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDADG-----------------------------TAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMD 615 M S+ K N + L DLPPG IG +WVL K ADG TAFLNG++D ++Y+ QP F H KV +L ++ GL+QS R WYL+ HD + S GF+ ++ C+Y++R S L++++YVDD++I+ + + K+ L+S +++ DMGE + +LG+KIT+DR +K L Q ++IK + +F + TPM+ Sbjct: 1 MSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSINRYNARLVAKGYTQREGIDYEDTFSPVTAFLNGELDEEIYMTQPMSFEVQGHEYKVSRLKHSIYGLKQSSRQWYLRFHDFITSFGFEMIEEDHCVYLKR-SKRSILILSLYVDDILIARNDMGSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPME 226
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: UPI00201AA0D4 (uncharacterized protein LOC8272619 isoform X1 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI00201AA0D4) HSP 1 Score: 152 bits (383), Expect = 3.970e-41 Identity = 80/221 (36.20%), Postives = 127/221 (57.47%), Query Frame = 1 Query: 4 EALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDA-------------DGTA----FLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPMD 615 E + EMG++ K N+++L DLP G + IG +WV KF+A G A FLNGD+ DVYV QP GFV KV+KL+KAL GL+Q+P+ WY ++ + FQ+S +E LYV+ + L+V YVDD++ +G++ ++ FK S+ +D+TD+G L LG+++ Q+ +L Q ++ D + +FG+ A +TP++ Sbjct: 34 EVMKEEMGAIEKNNTWSLVDLPNGKDAIGLKWVYKSKFNAYDSLKRNKARLVVKGYAQIPDFLNGDLIEDVYVHQPEGFVVKGSEQKVYKLHKALYGLKQAPQAWYSKIDSYFAKSDFQKSANEPTLYVK-NCGHDFLVVCFYVDDIIYTGNSLELMKTFKMSMMKAFDMTDLGSLHYFLGLEVVQNTGG--IFLSQKKYVIDLLKRFGMLNCKASKTPLN 251
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Match: A0A2N9GSR4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GSR4_FAGSY) HSP 1 Score: 158 bits (400), Expect = 4.170e-41 Identity = 76/213 (35.68%), Postives = 123/213 (57.75%), Query Frame = 1 Query: 4 EALHGEMGSLTKKNSYTLTDLPPGANVIGTRWVLSKKFDAD----------GTAFLNGDIDGDVYVRQPPGFVDP*HPNKVWKLNKALNGLRQSPRMWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTPAMVSDFKQSLASKYDLTDMGELSQILGIKITQDRCRKCFYLQQTSFIKDAISKFGLDYLPACRTPM 612 EA+H EM SL K N+Y L +LP G + +WV K DA TAFL+GD++ ++Y+ QP GF +KV +L K+L GL+Q+PR WY + ++ QG+ R+ + C+YVR+ +G +++ +YVDD++I G MV K+ L +D+ D+G QILG++I +DR K +L Q +++ + +F + + TP+ Sbjct: 463 EAMHEEMNSLHKNNTYELVELPKGKKALRNKWVFKLKKDASLDLELEQMDVKTAFLHGDLEEEIYMVQPEGFEAKGKEHKVCRLKKSLYGLKQAPRQWYKKFDSFMVGQGYTRTDADHCVYVRQFPNGKFIILLLYVDDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAKPVSTPL 675 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig992.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig992.2.1 >prot_H-akashiwo_Contig992.2.1 ID=prot_H-akashiwo_Contig992.2.1|Name=mRNA_H-akashiwo_Contig992.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=128bp MWYLQLHDHLLSQGFQRSGDESCLYVRRDSSGGELMVAVYVDDLVISGSTback to top mRNA from alignment at H-akashiwo_Contig992:212596..213405- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig992.2.1 ID=mRNA_H-akashiwo_Contig992.2.1|Name=mRNA_H-akashiwo_Contig992.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=810bp|location=Sequence derived from alignment at H-akashiwo_Contig992:212596..213405- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig992:212596..213405- >mRNA_H-akashiwo_Contig992.2.1 ID=mRNA_H-akashiwo_Contig992.2.1|Name=mRNA_H-akashiwo_Contig992.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=384bp|location=Sequence derived from alignment at H-akashiwo_Contig992:212596..213405- (Heterosigma akashiwo CCMP452)back to top |