mRNA_H-akashiwo_Contig991.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: A0A6V1V4J2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V4J2_HETAK) HSP 1 Score: 457 bits (1175), Expect = 2.260e-158 Identity = 224/243 (92.18%), Postives = 229/243 (94.24%), Query Frame = 1 Query: 1 LEVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGV-VEEXXXXXXDKPTIFSPFM 726 LEVVRQKLEED+TL ERTPWSPAQIVELLEICLETHF TIDGRIFTQSDGTPIGKSISGPIA IYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL SHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKE HTF YLHW S+HPKKTKLGVMKCLIHRAHRLCD+EEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGV VEE DKPTIF+PF+ Sbjct: 155 LEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKETHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVEVEEEE----DKPTIFAPFV 393
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: A0A7S4DDA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA1_HETAK) HSP 1 Score: 231 bits (589), Expect = 3.050e-67 Identity = 126/334 (37.72%), Postives = 192/334 (57.49%), Query Frame = 1 Query: 1 LEVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRC---KHKPTLWVRMRDDVFIIWDHGEEKLQEL*S-HVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVE--------------EXXXXXXDKPTIFSPFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQHQ 948 LEV+ +KL++D+TL +RT P QI+ LL +C+ETHF IDG I+TQ+DG PIGKSISG IA IY+ +EE+ + +++ K +P W R +DDV ++W G E+ ++N +E+RIQ++ E E +G L LD+ RVG + T +YRK HT + ++ P+K LG +K L++RA RL D EEDL E+ L D FI G+ V EVD +Y+ + E + I S ++PG S+ + ++ + V++VF + +L S + N+K R ++K V+YK+ C C YIGET + + R +HQ Sbjct: 219 LEVIYRKLQKDRTLKDRTDLKPRQIITLLRVCMETHFKDIDGDIWTQTDGCPIGKSISGVIAGIYMADYEERHVLNNKQLPPKWRPKFWKRQKDDVIVVWPSGAEEFDNFRKEYLNTREERIQWSGEFEVDGKLNVLDMVCMRVGRGIRTKIYRKPTHTLKFASVRTNRPRKEALGSLKGLVNRAVRLTDSEEDLAEEIKLLSDAFIVEGFAVEEVDTTVENYLAKIRSKESKEGDQTQVADGECQQEEEKRHVITSLYVPGVSDKLRRQLKGYNVDLVFKRGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKRHWGTRKGEHQ 552
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: A0A7S3XWS7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWS7_HETAK) HSP 1 Score: 199 bits (507), Expect = 4.120e-61 Identity = 94/123 (76.42%), Postives = 108/123 (87.80%), Query Frame = 1 Query: 1 LEVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTME 369 +E+VRQKLEE++TLS+RTPWSPAQI+EL EICLETHF TI GRIF+Q GTPIGKSISGPIA IYLNWF+E+FIYS+RCK+KPTLW RMR IWDHGEEKLQEL HVN QE+R+QFT+E Sbjct: 1 MEIVRQKLEEEETLSQRTPWSPAQIIELWEICLETHFKTIYGRIFSQPGGTPIGKSISGPIAGIYLNWFDEEFIYSERCKNKPTLWKRMRG----IWDHGEEKLQELLGHVNEQEERVQFTIE 119
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: UPI001C91F7F2 (uncharacterized protein LOC122370714 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91F7F2) HSP 1 Score: 201 bits (510), Expect = 2.560e-57 Identity = 114/316 (36.08%), Postives = 175/316 (55.38%), Query Frame = 1 Query: 1 LEVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVEEXXXXXXDKPTIFS-PFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQH 945 ++V+ KL ED TL ER+ I +L+ CLE + G + Q +G P+G S+S +A Y+ E+ + S K PTLW R DD FI+W HG+E LQE +N IQFT+ERE + L FLD+ ++R ++ TSVYRK + YL ++SSHP K G+++C+ RA R+C ++ E ++D F++NGYP + R + D+ + P++PG SE AK++R H ++V K L+ L N+K+P ++ ++K VY++ C CG SYIGE+ + DR K+H Sbjct: 104 VDVICDKLAEDDTLFERSEIGVDSIRKLMLACLECRYFLCLGAFYEQKEGAPMGLSLSVVLANAYMEHLEQSILTSATLK--PTLWRRYVDDTFILWPHGDEALQEFHQRLNDFCPSIQFTLEREVDQKLPFLDVLVQRSEGRLGTSVYRKATASNVYLKYNSSHPAAMKAGLIRCMEARARRVCSDMSSVKEEKSKIRDVFVANGYPEPFIKRAMRRRDASQTVQGEAAARDQEAYAAVPYVPGLSERIAKVLRPHRIKVAH-KSKRLRGHLVNVKDPVEQSKKKGAVYEIKCS-CGSSYIGESGRPKQDRLKEH 415
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: UPI001BB2C68D (uncharacterized protein LOC121430263 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2C68D) HSP 1 Score: 190 bits (482), Expect = 3.310e-51 Identity = 110/315 (34.92%), Postives = 165/315 (52.38%), Query Frame = 1 Query: 4 EVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGE-KVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVEEXXXXXXDKPTIFSPFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQH 945 +V Q+LE D +L +RT SP Q+ ELL L++ + DGR + Q +G +G +S IA +Y+ FEE +++ + P +W R DD FI+ D L ++VN Q+ I+FTMERE N +AFLD + R E ++ T+VYRK HT YL + S HP+ K GV+KCL RA R+ + + E + +SNGYP ++RV V EE K T+ PF+ S + + + + VF +++ +L K+P + VVYK+ CG C YIGET + +R +H Sbjct: 259 DVALQRLEADASLPDRTDLSPTQVTELLRFVLKSTYFMYDGRFYEQQEGAAMGSPVSAVIANLYMESFEEDALHACPPEFSPRIWKRYVDDTFIVTDRSTTDC--LLNYVNAQQPSIRFTMEREDNNRIAFLDTLVHRDDEGRLTTTVYRKPTHTDQYLAYDSHHPQSVKRGVVKCLYDRASRIVSKPQCTAAEKQRIASALVSNGYPRSFLNRVTKR--KNVAEEDIVRC--KSTVVLPFVDSISRQLRRHLEKYSIRAVFKSDTTIRKQLVRPKDPALPGRLDGVVYKIPCGACDKVYIGETGRPVNERMLEH 567
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: UPI001BB23F7E (uncharacterized protein LOC121414914 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB23F7E) HSP 1 Score: 176 bits (447), Expect = 2.800e-48 Identity = 103/301 (34.22%), Postives = 158/301 (52.49%), Query Frame = 1 Query: 16 QKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTMEREKNGVLAFLDLKMER-VGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVEEXXXXXXDKPTIFSPFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETA 915 Q+++ D TLSERT P QI +LL+ L + + G + Q++G +G +S +A +Y+ FE+ + +P +W R DD FII ++ E L +++N Q+ IQFT+E E+ G LAFLD+ ++R G K+ TSVYRK HT Y+ + S H K K G++KCL RA R+ +L E ++ SNGYP R + F P ++ +F + G S+ + + HG+ VF ++ +L + K+P +R VVY + C C SYIGETA Sbjct: 146 QRMQSDPTLSERTTLMPEQIADLLKFVLRSTYFLYRGSFYEQTEGAAMGSPVSAVVANLYMEGFEQNALPKCPSTCRPRVWKRYVDDTFIIVNNSEA--DSLLAYMNSQQPSIQFTLETEQGGKLAFLDMLVQRHEGGKLSTSVYRKPTHTDLYIPYDSHHDKSVKKGLVKCLFDRAARIITHPPELPKERAHIRVPLYSNGYPRRFIKNTFKKKQPPRDQK----------VFKN-IDGLSQQLKRRLEGHGIRTVFRSDTTIHKQLVHPKDPIPDHRRDGVVYNIPCQGCDGSYIGETA 433
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: A0A1B6GFD0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6GFD0_9HEMI) HSP 1 Score: 173 bits (439), Expect = 1.500e-47 Identity = 100/316 (31.65%), Postives = 163/316 (51.58%), Query Frame = 1 Query: 1 LEVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVEEXXXXXXDKPTIFS-PFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQH 945 L+++ L ED+ L+ERT I+ELLE+C + ++ ++G+I+ Q +G +G +S A I++ FE++ + + KP +W R DD F+++ HG+ KL E H+N I+ TME E L FLD+ + R + + T+V++K+ HT YL++ S+H K K GV L RA LC ++ L+ E ++ SNGYP +++ ++ E DK S P++PG SE ++ R + + F +L+ L K K+ VY + C C YIGET + R K+H Sbjct: 3 LKIIESCLNEDQKLNERTKLPVPVIMELLELCTQCNYFELEGKIYRQYEGMAMGSPLSPIFANIFMEEFEQKALAL--AQFKPKIWWRYVDDTFVVFPHGDTKLNEFLDHINSISPSIRLTMEVEVQNKLPFLDVCVLRDRDVLKTTVFQKKTHTGKYLNYHSNHQKSAKEGVAYSLFDRAKSLCSDKDGLKEEFKKVESDLRSNGYPQSVINK--CKRTRKIIPESVNQKSDKFAFMSIPYVPGLSEKIRRVGRKYNIRTAFKTHNTLRQSLVKTKPKNGTQDSKNCVYSIKCS-CDREYIGETKRPLNVRIKEH 313
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: L7M0W9_RHIPC (Putative tick transposon n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7M0W9_RHIPC) HSP 1 Score: 171 bits (433), Expect = 2.050e-46 Identity = 108/315 (34.29%), Postives = 165/315 (52.38%), Query Frame = 1 Query: 1 LEVVRQKLEEDKTLSERTPWSPAQIVELLEICLETHFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVEEXXXXXXDKPTIFSPFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQH 945 L V R+ LEED TL+ERTP S Q+ LLE CL + + + + F Q+ GT +G +IS +AA+ + E++ + KP L+VR DD F + GE + L + +N E IQFT+ERE L FLD+ + R + + SV+RK HT YLH+SS+HP K V++ L+ RA R+C + E + +NGY V R G + +I P++ G SE A++M+ GV+V ++ S + K+ + + VVY++ C +C SY+GET + F +R +QH Sbjct: 19 LSVTRRALEEDSTLNERTPLSVDQVCRLLEFCLSSTYFSYNNAFFKQTSGTAMGAAISATVAALVMEDVEKRAL--SVFDPKPKLFVRYVDDCFCVVKSGE--VDNLLACLNSVEPDIQFTVERENQLALPFLDVLVRRQRQSLSFSVFRKPTHTGRYLHFSSNHPACHKSSVVRSLVRRAERICSSPRQRKEERERIISDLGANGYTKAFVRRALLKSKNGGSVTPASPPRHRVSI--PYITGASEAIARIMKKAGVDVAHKPSTTIGSFIPRPKDRAPAEKAQGVVYRIPCADCPASYVGET-KNFCERMRQH 326
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: A0A5S6QH72_TRIMR (Reverse transcriptase domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QH72_TRIMR) HSP 1 Score: 170 bits (430), Expect = 8.090e-46 Identity = 102/316 (32.28%), Postives = 172/316 (54.43%), Query Frame = 1 Query: 7 VVRQKLEEDKTLSERTPWSPAQIVELLEICLE-THFNTIDGRIFTQSDGTPIGKSISGPIAAIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL*SHVNGQ-EKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKEMHTF*YLHWSSSHPKKTKLGVMKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVVEEXXXXXXDKPT-IFSPFMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQH 945 ++ + L +D +L++RT +P +V+L++ C+E ++F G+ ++Q G P+G S+S IA +++ EE+ S +H L+ R DD+F I G+E EL +H+N +IQFT+ERE+ G L FLD+ + + G ++ T VYRK ++ YL++ S+HPK K G++ ++ RA ++C +E L+ E+ F++ N +P+R + + T + P+ PG S+ +R GVEVVF ++L++ L + KN Q + VY + C CG YIGET R +QH Sbjct: 5 LILEALSKDSSLNQRTKLNPFHLVQLVKFCMEESNFFQWRGKFYSQEKGAPMGSSLSPVIAELFMEHLEEKAFPSGLSEHNVKLFKRYVDDIFAIVKQGKE--DELLNHLNNLFPGKIQFTIEREEEGCLPFLDVLVVKEGNQLKTKVYRKATNSGKYLNFLSNHPKSVKKGIVTAMVDRATKICSREY-LQEEIDFIRQTLRKNDFPIRLTEYCIEKKLHTWRNRVLRRNAAPHTRLVIPYYPGLSDRLQMAIRKLGVEVVFKNHINLRAILRSDKNKLSAEQIQGAVYMIQCS-CGARYIGETGHTVDVRFQQH 316
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Match: A0A7S3Y8W7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8W7_HETAK) HSP 1 Score: 160 bits (406), Expect = 9.840e-46 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 1 Query: 721 FMPGFSENFAKLMRTHGVEVVFTKPVSLQSELCNLKNPRDKLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQHQYCVQTEN 969 F+PGFSENFAKLMR HGVEVVFTKPVSLQSELCNLK PRD+LQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQHQY V+TE+ Sbjct: 2 FLPGFSENFAKLMRAHGVEVVFTKPVSLQSELCNLKPPRDRLQRKDVVYKVDCGECGVSYIGETAQRFTDRAKQHQYSVRTED 84 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig991.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig991.4.1 >prot_H-akashiwo_Contig991.4.1 ID=prot_H-akashiwo_Contig991.4.1|Name=mRNA_H-akashiwo_Contig991.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=150bp MKCLIHRAHRLCDQEEDLRWELGFLKDQFISNGYPVREVDRVFASYVPGVback to top mRNA from alignment at H-akashiwo_Contig991:374232..375200+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig991.4.1 ID=mRNA_H-akashiwo_Contig991.4.1|Name=mRNA_H-akashiwo_Contig991.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=969bp|location=Sequence derived from alignment at H-akashiwo_Contig991:374232..375200+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig991:374232..375200+ >mRNA_H-akashiwo_Contig991.4.1 ID=mRNA_H-akashiwo_Contig991.4.1|Name=mRNA_H-akashiwo_Contig991.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=450bp|location=Sequence derived from alignment at H-akashiwo_Contig991:374232..375200+ (Heterosigma akashiwo CCMP452)back to top |