mRNA_H-akashiwo_Contig990.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig990.3.1
Unique NamemRNA_H-akashiwo_Contig990.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A812ZZP8_9DINO (Kif1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZZP8_9DINO)

HSP 1 Score: 180 bits (457), Expect = 1.040e-54
Identity = 97/118 (82.20%), Postives = 107/118 (90.68%), Query Frame = 1 
Query:    4 VSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            VS INL+DLAGSER ASTGA GDRLKEGAAIN SLSALGNVI+ALA+NS    KK +VPYRNSVLT LLKNSLGGNA+T MIAA+SPAD+NY+ETLSTLRYA+RAKQIKNKA+INEDP
Sbjct:   75 VSIINLVDLAGSERAASTGATGDRLKEGAAINQSLSALGNVINALAENS-GKKKKKMVPYRNSVLTMLLKNSLGGNAKTAMIAAMSPADVNYDETLSTLRYADRAKQIKNKAIINEDP 191
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A7S0ETZ8_9CRYP (Kinesin-like protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ETZ8_9CRYP)

HSP 1 Score: 177 bits (449), Expect = 4.770e-53
Identity = 95/119 (79.83%), Postives = 104/119 (87.39%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            KVS INL+DLAGSER ASTGA GDRLKEGAAIN SLSALGNVISALA  SE   K V VPYR+S+LT LLK SLGGN++T MIAA+SPADINYEETLSTLRYA+RAKQIKN A++NEDP
Sbjct:   70 KVSKINLVDLAGSERAASTGATGDRLKEGAAINKSLSALGNVISALADASEKKGKHVFVPYRDSILTWLLKESLGGNSKTIMIAALSPADINYEETLSTLRYADRAKQIKNAAIVNEDP 188
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A8B6FPQ2_MYTGA (Kinesin-like protein (Fragment) n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FPQ2_MYTGA)

HSP 1 Score: 168 bits (425), Expect = 6.410e-50
Identity = 90/119 (75.63%), Postives = 104/119 (87.39%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            K S +NL+DLAGSER  STGA GDRLKEGA IN SLSALGNVISALA  S    KK++VPYR+SVLT LL+N+LGGN++T MIAA+SPADINY+ETLSTLRYA+RAK+IKNKAVINE+P
Sbjct:  134 KSSVMNLVDLAGSERADSTGAVGDRLKEGANINKSLSALGNVISALADLSMGTKKKIVVPYRDSVLTKLLQNALGGNSKTIMIAALSPADINYDETLSTLRYADRAKKIKNKAVINENP 252
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A482R714_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R714_9ARCH)

HSP 1 Score: 175 bits (443), Expect = 1.410e-49
Identity = 96/120 (80.00%), Postives = 106/120 (88.33%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSE-AGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            KV+ INLIDLAGSER  STGA GDRLKEGAAIN+SL+ LGN ISALA NS+ A  KKV VPYR+S LT LL+NSLGGNA+T MIAA+SPADINYEETLSTLRYA+RAKQIKNKAV+NEDP
Sbjct:  123 KVAIINLIDLAGSERADSTGATGDRLKEGAAINLSLTCLGNCISALATNSDPALKKKVRVPYRDSALTMLLQNSLGGNAKTIMIAALSPADINYEETLSTLRYADRAKQIKNKAVVNEDP 242
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A812MDA5_9DINO (Kif1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MDA5_9DINO)

HSP 1 Score: 177 bits (448), Expect = 4.210e-49
Identity = 96/120 (80.00%), Postives = 106/120 (88.33%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKK-VLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            K S INLIDLAGSERQ  TGA GDRLKEGAAIN+SLS+LGN ISALAKNS+   KK V VPYR+SVLT LL+NSLGGNA+T MIAA+SPA INY+ETLSTLRYA+RAKQIKNKAV+NEDP
Sbjct:  193 KTSLINLIDLAGSERQKGTGATGDRLKEGAAINLSLSSLGNCISALAKNSDPKQKKRVRVPYRDSVLTMLLQNSLGGNAKTIMIAAVSPASINYDETLSTLRYADRAKQIKNKAVVNEDP 312
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A067CTI9_SAPPC (Kinesin motor domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTI9_SAPPC)

HSP 1 Score: 177 bits (448), Expect = 4.580e-49
Identity = 96/119 (80.67%), Postives = 106/119 (89.08%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            KVS INLIDLAGSER ASTGA G RLKEGAAIN SLSALGN ISALA N+ +G KK+LVPYRNS LTHLLK+SLGGNA+T MIAA+SPA +NY ETLSTLRYA+RAKQIKN+AV+NEDP
Sbjct:  236 KVSRINLIDLAGSERAASTGATGARLKEGAAINQSLSALGNCISALADNA-SGKKKILVPYRNSKLTHLLKDSLGGNAKTIMIAALSPASVNYAETLSTLRYADRAKQIKNQAVVNEDP 353
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A1V9YBQ1_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBQ1_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.160e-48
Identity = 96/119 (80.67%), Postives = 105/119 (88.24%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            KVS INLIDLAGSER ASTGA G RLKEGAAIN SLSALGN ISALA N+ +G KK LVPYRNS LTHLLK+SLGGNA+T MIAA+SPA +NY ETLSTLRYA+RAKQIKN+AV+NEDP
Sbjct:  236 KVSRINLIDLAGSERAASTGATGARLKEGAAINQSLSALGNCISALADNA-SGKKKTLVPYRNSKLTHLLKDSLGGNAKTIMIAALSPASVNYAETLSTLRYADRAKQIKNQAVVNEDP 353
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: C3ZBS4_BRAFL (Kinesin-like protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZBS4_BRAFL)

HSP 1 Score: 174 bits (441), Expect = 1.190e-48
Identity = 92/119 (77.31%), Postives = 105/119 (88.24%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            K S INL+DLAGSER  STGA GDRLKEGA IN SLSALGNVISALA  S  G KKV+VPYR+SVLT LL+N+LGGN++T MIAA+SPADINY+ETLSTLRYA+RAK+IKNKAV+NE+P
Sbjct:  194 KSSVINLVDLAGSERADSTGATGDRLKEGANINKSLSALGNVISALADLSSGGKKKVMVPYRDSVLTKLLQNALGGNSKTVMIAALSPADINYDETLSTLRYADRAKKIKNKAVVNENP 312
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BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A8J9ZSB3_BRALA (KIF1A protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZSB3_BRALA)

HSP 1 Score: 173 bits (439), Expect = 1.870e-48
Identity = 93/119 (78.15%), Postives = 106/119 (89.08%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            K S INL+DLAGSER +STGA GDRLKEG+AIN SLS LGNVISALA NS +G KKV+VPYRNSVLT LL+N+LGGN++T MIAA+SPADINYEETLSTLRYA+RAK+IKN AV+NE P
Sbjct:  245 KSSEINLVDLAGSERASSTGATGDRLKEGSAINQSLSTLGNVISALADNS-SGKKKVMVPYRNSVLTKLLQNALGGNSKTIMIAALSPADINYEETLSTLRYADRAKKIKNNAVVNESP 362
[Close]
BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Match: A0A7S0MPT1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MPT1_9CRYP)

HSP 1 Score: 162 bits (409), Expect = 2.120e-48
Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 1 
Query:    1 KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNSEAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTLRYANRAKQIKNKAVINEDP 357
            K + +NL+DLAGSER  STGA GDRLKEGAAIN+SL+ LGNVI+ALA+ S    K VLVPYR S LT +L+++LGGNA+T MIAA+SPADINYEETLSTLRYA+RAKQI N AV+NEDP
Sbjct:   51 KKAKMNLVDLAGSERAESTGATGDRLKEGAAINLSLTMLGNVITALAEKSNNPKKNVLVPYRESKLTCILQDALGGNAKTIMIAALSPADINYEETLSTLRYADRAKQIVNAAVVNEDP 169
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig990.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812ZZP8_9DINO1.040e-5482.20Kif1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S0ETZ8_9CRYP4.770e-5379.83Kinesin-like protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A8B6FPQ2_MYTGA6.410e-5075.63Kinesin-like protein (Fragment) n=2 Tax=Mytilus ga... [more]
A0A482R714_9ARCH1.410e-4980.00Kinesin motor domain-containing protein (Fragment)... [more]
A0A812MDA5_9DINO4.210e-4980.00Kif1 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
A0A067CTI9_SAPPC4.580e-4980.67Kinesin motor domain-containing protein n=2 Tax=Sa... [more]
A0A1V9YBQ1_9STRA1.160e-4880.67Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
C3ZBS4_BRAFL1.190e-4877.31Kinesin-like protein (Fragment) n=1 Tax=Branchiost... [more]
A0A8J9ZSB3_BRALA1.870e-4878.15KIF1A protein n=2 Tax=Branchiostoma lanceolatum Ta... [more]
A0A7S0MPT1_9CRYP2.120e-4872.27Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig990contigH-akashiwo_Contig990:77088..78319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008610637.1
PFAMsFHA,KIF1B,Kinesin,Kinesin_assoc,PH
Model size357
Max annot lvl2759|Eukaryota
KEGG koko:K10392
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005871,GO:0005875,GO:0006810,GO:0006928,GO:0007017,GO:0007018,GO:0008150,GO:0008289,GO:0008574,GO:0009987,GO:0010970,GO:0015630,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030705,GO:0032991,GO:0035091,GO:0042623,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0046907,GO:0046983,GO:0047496,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0072383,GO:0072384,GO:0072386,GO:0099111,GO:0099518,GO:1901981,GO:1902936,GO:1990939
Exons2
Evalue7.51e-50
EggNOG OGsCOG5059@1|root,KOG0245@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size357
COG categoryZ
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388069.70032-CDS-H-akashiwo_Contig990:77087..773961681388069.70032-CDS-H-akashiwo_Contig990:77087..77396Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig990 77088..77396 -
1681388069.7148428-CDS-H-akashiwo_Contig990:78271..783191681388069.7148428-CDS-H-akashiwo_Contig990:78271..78319Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig990 78272..78319 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig990.3.1prot_H-akashiwo_Contig990.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig990 77088..78319 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig990.3.1

>prot_H-akashiwo_Contig990.3.1 ID=prot_H-akashiwo_Contig990.3.1|Name=mRNA_H-akashiwo_Contig990.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=119bp
KVSCINLIDLAGSERQASTGAQGDRLKEGAAINVSLSALGNVISALAKNS
EAGNKKVLVPYRNSVLTHLLKNSLGGNARTTMIAAISPADINYEETLSTL
RYANRAKQIKNKAVINEDP
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mRNA from alignment at H-akashiwo_Contig990:77088..78319-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig990.3.1 ID=mRNA_H-akashiwo_Contig990.3.1|Name=mRNA_H-akashiwo_Contig990.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1232bp|location=Sequence derived from alignment at H-akashiwo_Contig990:77088..78319- (Heterosigma akashiwo CCMP452)
AAGGTCTCTTGCATTAATTTGATTGATCTTGCTGGGAGTGAAAGACAGGT
AAATGTTTTGTGTGGTTGTAGAGCGTGAAATTTCACATTAATTGTGCATG
TCTTATTGCGTAATACATAGCAGTACTTATGTTTAGCCCGTTTGTCGGTC
GTCCTTGATGCGGGCTATCTGTGGAGCATTGGACTGGGTAGCGGCTGTTT
GCTTTTACCCTGTTGGCAGACTCTGTATACTACTGTTTCTACTAAAAAGT
AAAAATGATGGTTTCTTTTACGTGTGTGTGTGTGTGTGCTAGACTGCAGT
TGGAGCTGTTTTCAAACCCCCTATAGCAGCATATTATTATAGCTACAGCC
TGTTTCTAAACCCCCTTTGTAGCTGTTCCACATGTTTTTTTTTGTCTACG
TAGTATGTACACACCATGCTTCATGCTCTTCATGGTGCCGGTCAGTCCCC
ATATCTTTGACCGGTGTTAACTTTCGCGGCTGTGCCGAGATCGCACCGGT
CGATACTTGCGGGATAATTCCGACAGGCGTGGCGCTTTTCCGGGTCTAGG
GCCGCCTGGTCCGTGTTCATTCTCGTTGGCACGTCAACATTCTGCCGCTA
ATCGTTCAATTGATCTTATTCTCGAATTCGAAGCACTTTTGGCAAACCGA
TTGCGCGCGCATCCACCTGTCACCAATTTGACATGACGGGATTCGATCTG
TCTACTTTGTGCTTCGAAGTCTTTGCATATCCAATATTACTGTAGGATAT
ACAATATATGTTGACCTGTGTTTAGAGGCACAGAAGCTCAGCAGTTGTTA
TATATATGTACTACTTATTATACTATAATATCAGCTGGTGTAGTTTTTAT
AAAATTCCTTCAAATTTGAGATTCTTGTGTTCCTTCCACCTCCCACACCT
TCTTGTGTTTCCAAATGTATAAGGCCTCCACAGGTGCCCAAGGGGACCGA
TTAAAGGAAGGGGCGGCAATCAACGTATCTCTTTCTGCATTGGGGAATGT
CATATCTGCTTTGGCAAAGAACTCTGAGGCAGGGAACAAAAAAGTCCTGG
TCCCCTATAGAAACTCTGTGCTGACACATCTTCTGAAAAACTCTCTCGGA
GGAAATGCACGAACCACAATGATCGCTGCAATTAGCCCAGCTGATATCAA
CTATGAAGAGACACTGAGTACTTTGAGATATGCCAATCGAGCTAAGCAAA
TCAAAAACAAGGCAGTCATCAATGAGGATCCT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig990:77088..78319-

>mRNA_H-akashiwo_Contig990.3.1 ID=mRNA_H-akashiwo_Contig990.3.1|Name=mRNA_H-akashiwo_Contig990.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=357bp|location=Sequence derived from alignment at H-akashiwo_Contig990:77088..78319- (Heterosigma akashiwo CCMP452)
AAGGTCTCTTGCATTAATTTGATTGATCTTGCTGGGAGTGAAAGACAGGC
CTCCACAGGTGCCCAAGGGGACCGATTAAAGGAAGGGGCGGCAATCAACG
TATCTCTTTCTGCATTGGGGAATGTCATATCTGCTTTGGCAAAGAACTCT
GAGGCAGGGAACAAAAAAGTCCTGGTCCCCTATAGAAACTCTGTGCTGAC
ACATCTTCTGAAAAACTCTCTCGGAGGAAATGCACGAACCACAATGATCG
CTGCAATTAGCCCAGCTGATATCAACTATGAAGAGACACTGAGTACTTTG
AGATATGCCAATCGAGCTAAGCAAATCAAAAACAAGGCAGTCATCAATGA
GGATCCT
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