mRNA_H-akashiwo_Contig988.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A0F3KI88_9GAMM (Maebl n=1 Tax=Luteibacter yeojuensis TaxID=345309 RepID=A0A0F3KI88_9GAMM) HSP 1 Score: 109 bits (272), Expect = 2.100e-27 Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+L+DA+N P ++D LL EVAKYG ++RI+GDW S L GW+T + EH + P+ Q+ + K +D+A+IID MDLL++E DGF I SSDSDFT Sbjct: 9 LAVLVDADNARPAIVDGLLAEVAKYGTAHVKRIYGDWTSPHLNGWKTALLEHSIQPIQQFAYTSGKNATDSAMIIDAMDLLYSER--FDGFCIVSSDSDFT 107
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A534SA78_9DELT (NYN domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534SA78_9DELT) HSP 1 Score: 109 bits (272), Expect = 2.450e-27 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDAEN ++D LL E+AKYG ++RI+GDW + LL+GW+ + EH + P+ Q+ + K SD+ALIID MDLL+TE +DGF I SSDSDFT Sbjct: 10 LAVLIDAENTQASIIDALLAEIAKYGVASVRRIYGDWTTTLLRGWKDVLLEHAVQPIQQFRYTVGKNASDSALIIDAMDLLYTEK--MDGFCIVSSDSDFT 108
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A535BKG9_9DELT (NYN domain-containing protein n=8 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A535BKG9_9DELT) HSP 1 Score: 108 bits (269), Expect = 7.020e-27 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N PP ++D LL E+AKYG ++RI+GDW + L+GW+ + E + P+ Q+ + K +D+ALIID MDLL+TE LDGF I SSDSDFT Sbjct: 10 LAVLIDADNTPPSIIDALLAEIAKYGIASVRRIYGDWTTPNLRGWKDVLLEQAIQPIQQFRYTVGKNATDSALIIDAMDLLYTEK--LDGFCIVSSDSDFT 108
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: B4S4I9_PROA2 (HTH OST-type domain-containing protein n=2 Tax=Prosthecochloris TaxID=1101 RepID=B4S4I9_PROA2) HSP 1 Score: 107 bits (268), Expect = 9.890e-27 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N ++D LL E+AKYG ++RI+GDW S LLKGW+ + EH + P+ Q+ + K K +D+A+IID MDLL+T DGF I SSDSDFT Sbjct: 9 LAVLIDADNTQASIIDGLLSEIAKYGVASVRRIYGDWTSPLLKGWKEILLEHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGK--FDGFCIVSSDSDFT 107
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A3P3XNL0_9SPIR (HTH OST-type domain-containing protein n=4 Tax=Spirochaetales TaxID=136 RepID=A0A3P3XNL0_9SPIR) HSP 1 Score: 107 bits (268), Expect = 1.150e-26 Identity = 51/101 (50.50%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+L+DA+N P ++D LL E+AKYG ++RI+GDW + L+GW+ ++ E+ + PV Q+ + K +D+A+IID MDLL+TE +LDGF I SSDSDFT Sbjct: 9 LAVLVDADNTQPAIIDGLLAEIAKYGIASVKRIYGDWTNPNLRGWKERLLEYAIQPVQQFAYTTGKNSTDSAMIIDAMDLLYTE--NLDGFCIVSSDSDFT 107
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: UPI001E5B95BE (NYN domain-containing protein n=2 Tax=Arenicella chitinivorans TaxID=1329800 RepID=UPI001E5B95BE) HSP 1 Score: 108 bits (269), Expect = 1.410e-26 Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N P ++D LL E+A YG ++RI+GDW S LKGW+ + EH + P+ Q+ + K K +D+A+IID MDLL+++A L+GF I SSDSDFT Sbjct: 40 LAVLIDADNAQPSIVDALLSEIANYGIASVKRIYGDWTSPGLKGWKEVLLEHSIQPMQQFAYTKGKNATDSAMIIDAMDLLYSDA--LEGFCIVSSDSDFT 138
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A7C4X682_9SPIR (NYN domain-containing protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C4X682_9SPIR) HSP 1 Score: 107 bits (267), Expect = 1.550e-26 Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N PP +++ LL EVAKYG ++RI+GDW + LK W+ + ++ + P+ Q+++ K +D+ALIID MDLL+TE LDGF I SSDSDFT Sbjct: 15 LAMLIDADNTPPAIIEGLLAEVAKYGIASVKRIYGDWTAPNLKQWKESLLQYAIQPIQQFSYTSGKNATDSALIIDAMDLLYTEK--LDGFCIVSSDSDFT 113
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A3C1C7C7_9SPIO (Maebl n=4 Tax=Spirochaetes TaxID=203691 RepID=A0A3C1C7C7_9SPIO) HSP 1 Score: 107 bits (267), Expect = 1.620e-26 Identity = 51/101 (50.50%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N P ++D LL E+AKYG ++RI+GDW + L+GW+ ++ E+ + PV Q+ + K +D+A+IID MDLL+TE +LDGF + SSDSDFT Sbjct: 9 LAVLIDADNTQPTIIDGLLAEIAKYGVASVKRIYGDWTNPNLRGWKERLLEYAIQPVQQFAYTTGKNSTDSAMIIDAMDLLYTE--NLDGFCLVSSDSDFT 107
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: F8F4J7_TRECH (HTH OST-type domain-containing protein n=4 Tax=Bacteria TaxID=2 RepID=F8F4J7_TRECH) HSP 1 Score: 107 bits (267), Expect = 1.650e-26 Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N P ++D LL EVAKYG ++RI+GDW S L+ W+ ++ E+ + P+ Q+++ K +D+A+IID MDLL+TE LDGF I SSDSDFT Sbjct: 18 LAVLIDADNTQPAIIDGLLNEVAKYGVASVKRIYGDWTSTNLRSWKDRLLEYAIQPIQQFSYTSGKNATDSAMIIDAMDLLYTEK--LDGFCIVSSDSDFT 116
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Match: A0A1K1QKI2_9GAMM (OST-HTH/LOTUS domain-containing protein n=4 Tax=Rhodanobacteraceae TaxID=1775411 RepID=A0A1K1QKI2_9GAMM) HSP 1 Score: 107 bits (266), Expect = 1.730e-26 Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 1 LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTEHDLVPVHQYTFVKKKGFSDAALIIDCMDLLHTEAEDLDGFVIASSDSDFT 303 LA+LIDA+N P ++D LL EVAKYG ++RI+GDW L GW+T + +H + P+ Q+ + K +D+A+IID MDLL++E DGF I SSDSDFT Sbjct: 8 LAVLIDADNARPAIVDGLLAEVAKYGTAHVKRIYGDWTGPNLNGWKTALLDHSIQPIQQFAYTSGKNATDSAMIIDAMDLLYSER--FDGFCIVSSDSDFT 106 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig988.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig988.2.1 >prot_H-akashiwo_Contig988.2.1 ID=prot_H-akashiwo_Contig988.2.1|Name=mRNA_H-akashiwo_Contig988.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=101bp LALLIDAENIPPCVMDKLLPEVAKYGEVKMQRIFGDWESDLLKGWRTKVTback to top mRNA from alignment at H-akashiwo_Contig988:150299..150601- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig988.2.1 ID=mRNA_H-akashiwo_Contig988.2.1|Name=mRNA_H-akashiwo_Contig988.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=303bp|location=Sequence derived from alignment at H-akashiwo_Contig988:150299..150601- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig988:150299..150601- >mRNA_H-akashiwo_Contig988.2.1 ID=mRNA_H-akashiwo_Contig988.2.1|Name=mRNA_H-akashiwo_Contig988.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=303bp|location=Sequence derived from alignment at H-akashiwo_Contig988:150299..150601- (Heterosigma akashiwo CCMP452)back to top |