mRNA_H-akashiwo_Contig987.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig987.4.1
Unique NamemRNA_H-akashiwo_Contig987.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A7S3Y8S1_HETAK (Hypothetical protein (Fragment) n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S1_HETAK)

HSP 1 Score: 340 bits (872), Expect = 1.100e-115
Identity = 167/214 (78.04%), Postives = 182/214 (85.05%), Query Frame = 1
Query:    1 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGA-GVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGAG 639
            +RHGQ L+GLP+VCDGCG PFSLEHAL C KGG +K GHD + DE  HL ++AYGA GVKKEPFLRDASG V DKDLRADF+A+ VWERQRVAFFDNRILDADAPSRF+RN SYVTAMRAAVQEKK +Y ERCE++AGSFTPLVCTVDGVFHREFVAFMKRVAA LA KW + Y  VMCWVR+RLQFALIRAVDLRLRGSR  F   G  D AG
Sbjct:   28 LRHGQELRGLPSVCDGCGAPFSLEHALNCMKGGNIKLGHDQVRDECVHLCTMAYGAAGVKKEPFLRDASGNVRDKDLRADFLAIGVWERQRVAFFDNRILDADAPSRFDRNTSYVTAMRAAVQEKKTRYLERCEEMAGSFTPLVCTVDGVFHREFVAFMKRVAAALAGKWGKSYEEVMCWVRIRLQFALIRAVDLRLRGSRMRFQKAGFSDKAG 241          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A7S3XPK9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPK9_HETAK)

HSP 1 Score: 221 bits (564), Expect = 2.620e-71
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 1
Query:   64 SLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASG-KVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGS 414
            SLEHALCCKKGG +KKG+D LVDESCHLASLAYGAGVKKEPFLRDASG KVLDKDLRADFMA SVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMR AVQEKKKKYQERCEDLAGS
Sbjct:    1 SLEHALCCKKGGNMKKGYDQLVDESCHLASLAYGAGVKKEPFLRDASGGKVLDKDLRADFMAHSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRTAVQEKKKKYQERCEDLAGS 118          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A6V1VIF5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VIF5_HETAK)

HSP 1 Score: 218 bits (554), Expect = 6.290e-70
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 1
Query:  331 MSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGAGMGLVY 654
            MSYVTAMR AVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAA LAEKWH+PYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFG+MDGAGMGLVY
Sbjct:    1 MSYVTAMRTAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAALAEKWHKPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGLMDGAGMGLVY 108          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A7S3XPJ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPJ1_HETAK)

HSP 1 Score: 212 bits (540), Expect = 2.180e-67
Identity = 107/133 (80.45%), Postives = 118/133 (88.72%), Query Frame = 1
Query:  112 GHDHLVDESC-HLASLAYG-AGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEK 504
            G D +V + C HL ++AYG AGVKKEPFLR+ASG V DKDLRADFMA+ VWERQRVAFFDNRILDADAPSRFNRNMSYVTAMR AVQEKKKKY ERCE++AGSFTPLVCT+D VFH+EFVAFMKR+AA LA K
Sbjct:    5 GPDQVVRDECVHLCAMAYGVAGVKKEPFLREASGNVRDKDLRADFMAIGVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRTAVQEKKKKYLERCEEMAGSFTPLVCTLDRVFHQEFVAFMKRMAAALAGK 137          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A0K8SWD2_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8SWD2_LYGHE)

HSP 1 Score: 215 bits (547), Expect = 2.220e-66
Identity = 114/212 (53.77%), Postives = 138/212 (65.09%), Query Frame = 1
Query:    1 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGA 636
            +R+G   +GLPA+CDGCG   ++ HAL CKKGGLVK GHD + DE   LASLA+  GV  EP L+DAS       L AD  A  VWE  R A+FD RI++ADAPS   R   + T    A +EK  KY    EDL GSFTPL+ + DGV HREF  F KR+AAVL EKW +P+  V+ WVRV+LQ A+IRAV LR+RG+RK     G  DGA
Sbjct:   72 LRYGHTPEGLPALCDGCGSIMNVTHALNCKKGGLVKHGHDQVRDECARLASLAW-EGVATEPVLQDASANA--PMLVADIKAEGVWESGRAAYFDTRIINADAPS--YRGQEWSTISNNAAREKHNKYNRAAEDLRGSFTPLIISCDGVMHREFGVFSKRIAAVLNEKWSKPFSQVVSWVRVKLQMAVIRAVSLRIRGARKRVRCLGAEDGA 278          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A0K8SU65_LYGHE (Uncharacterized protein n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8SU65_LYGHE)

HSP 1 Score: 205 bits (522), Expect = 1.530e-63
Identity = 105/206 (50.97%), Postives = 137/206 (66.50%), Query Frame = 1
Query:   28 LPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDAS-GKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGAGM 642
            LP  CDGCG PF L HAL CK+GGLVK+GHD + DE   LA LA+G G   EP L+++S G  +   L AD     VWE  R AFFD RI++ADA S  ++  ++ +  ++A + K +KY    E L GSFTPL+C+ DG  HRE+  F KR+A+ LAEKW RPY +V+ WV+VR Q ++IRAV LRLRG+RK     G+ DGAG+
Sbjct:   12 LPEKCDGCGAPFDLNHALNCKRGGLVKRGHDSVRDECAKLAGLAWG-GASVEPVLQESSEGSPM---LVADIKVQGVWESARPAFFDTRIVNADAASYLSQ--TWESTAQSAARRKHEKYDRAAEHLRGSFTPLICSCDGALHREYTVFQKRLASTLAEKWSRPYSLVLGWVKVRTQVSIIRAVSLRLRGTRKIIRSLGLEDGAGV 211          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A6A4JU40_APOLU (Uncharacterized protein n=1 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4JU40_APOLU)

HSP 1 Score: 203 bits (516), Expect = 1.170e-62
Identity = 107/217 (49.31%), Postives = 142/217 (65.44%), Query Frame = 1
Query:    1 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGAGMGLV 651
            MR+G    GLPA CDGCGE  SL HAL CKKGGLVK GHD++ DE   LA+LA+G GV  EP +R+A+       L AD   + VW+  RVAFFDNRI++ADAPS   R  S V+    A +EK +KY +  ED+ GSFTPL+ + DG  H+EF AF+K+ A  L+EKW R    +  +++V++Q  ++RAV +RLRG+RK     G  DGA + L+
Sbjct:    1 MRYGYEPSGLPASCDGCGESMSLTHALNCKKGGLVKWGHDYVRDECAMLANLAWG-GVATEPVMREAANG--QPALIADIQDIGVWDSGRVAFFDNRIINADAPSYCTREWSAVSQQ--AAREKHRKYDQAAEDVRGSFTPLIVSCDGALHKEFQAFLKKAANRLSEKWGRDLSEISGFLKVKVQITVLRAVSMRLRGTRKKIRSLGTEDGAILPLL 212          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A7S4DD50_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD50_HETAK)

HSP 1 Score: 204 bits (519), Expect = 1.100e-61
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 1
Query:    1 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDN 288
            MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMA SVWERQRVAFFDN
Sbjct:  228 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMAHSVWERQRVAFFDN 323          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A6H5HCT1_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HCT1_9HEMI)

HSP 1 Score: 215 bits (548), Expect = 4.760e-61
Identity = 112/217 (51.61%), Postives = 141/217 (64.98%), Query Frame = 1
Query:    1 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGAGMGLV 651
            +R+G    GLP  CDGC   F + HAL CKKGGLVK+GHD++ DE+  LA+ A+G GV  EP +R+A     +  L  D     VWE  R AFFDNRI++ADA S  +R  S +     A QEK  KY + CEDL GSFTPLVC+ DGV HREF   +KR A  LAEKW RPY  V+ WVRVR++ A+I+AV LRLRG+R+     GM DGA + ++
Sbjct:  827 LRYGHTPMGLPQTCDGCSNQFDVSHALNCKKGGLVKRGHDYVRDETAALAAQAWG-GVTFEPLIREAGAN--ETALVGDIRIEGVWESGRPAFFDNRIVNADAASYTSREWSQIAQQ--AAQEKHHKYDQACEDLRGSFTPLVCSCDGVLHREFHTLLKRTADRLAEKWKRPYTQVLGWVRVRIEIAIIKAVSLRLRGARRKAQYLGMDDGAALPVM 1038          
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Match: A0A146L7G5_LYGHE (Uncharacterized protein n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L7G5_LYGHE)

HSP 1 Score: 213 bits (543), Expect = 2.130e-60
Identity = 114/217 (52.53%), Postives = 142/217 (65.44%), Query Frame = 1
Query:    1 MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLASLAYGAGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILDADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVFHREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSRKAFHGFGMMDGAGMGLV 651
            MR+G    GLP  CDGCGE   L HAL CKKGGLVK GHD++ DE   LA+LA+G GV  EP LRDA+G      L AD  A  VWE  RVAFFDNRI++ADAPS   R  S V+    A +EK +KY +  ED+  SFTPL+ + +GV H+EF AF+KRVA  L +KW  P      +V+V++QFA++RAV LRLRG+RK     G  DGA + L+
Sbjct:  808 MRYGYEPSGLPTFCDGCGELMGLTHALNCKKGGLVKWGHDYVRDECAMLANLAWG-GVTTEPVLRDAAGG--QPALIADIQANGVWESGRVAFFDNRIINADAPSYCTREWSAVSHQ--AAREKHRKYDQAAEDVRSSFTPLIASCEGVLHKEFEAFLKRVAGKLTDKWETPLSQTTSFVKVKMQFAVLRAVSLRLRGTRKRLRSLGTEDGAVLPLL 1019          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig987.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8S1_HETAK1.100e-11578.04Hypothetical protein (Fragment) n=4 Tax=Heterosigm... [more]
A0A7S3XPK9_HETAK2.620e-7194.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V1VIF5_HETAK6.290e-7096.30Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3XPJ1_HETAK2.180e-6780.45Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0K8SWD2_LYGHE2.220e-6653.77Uncharacterized protein (Fragment) n=1 Tax=Lygus h... [more]
A0A0K8SU65_LYGHE1.530e-6350.97Uncharacterized protein n=2 Tax=Lygus hesperus Tax... [more]
A0A6A4JU40_APOLU1.170e-6249.31Uncharacterized protein n=1 Tax=Apolygus lucorum T... [more]
A0A7S4DD50_HETAK1.100e-6198.96Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A6H5HCT1_9HEMI4.760e-6151.61Uncharacterized protein n=1 Tax=Nesidiocoris tenui... [more]
A0A146L7G5_LYGHE2.130e-6052.53Uncharacterized protein n=2 Tax=Lygus hesperus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig987contigH-akashiwo_Contig987:211319..211975 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog400682.PAC_15705610
PFAMsRVT_1
Model size657
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.26e-50
EggNOG OGs2E24P@1|root,2S9D9@2759|Eukaryota,3A6X8@33154|Opisthokonta,3BYHR@33208|Metazoa
Cds size657
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388068.1553514-CDS-H-akashiwo_Contig987:211318..2119751681388068.1553514-CDS-H-akashiwo_Contig987:211318..211975Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig987 211319..211975 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig987.4.1prot_H-akashiwo_Contig987.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig987 211319..211975 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig987.4.1

>prot_H-akashiwo_Contig987.4.1 ID=prot_H-akashiwo_Contig987.4.1|Name=mRNA_H-akashiwo_Contig987.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=219bp
MRHGQGLQGLPAVCDGCGEPFSLEHALCCKKGGLVKKGHDHLVDESCHLA
SLAYGAGVKKEPFLRDASGKVLDKDLRADFMALSVWERQRVAFFDNRILD
ADAPSRFNRNMSYVTAMRAAVQEKKKKYQERCEDLAGSFTPLVCTVDGVF
HREFVAFMKRVAAVLAEKWHRPYGVVMCWVRVRLQFALIRAVDLRLRGSR
KAFHGFGMMDGAGMGLVY*
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mRNA from alignment at H-akashiwo_Contig987:211319..211975+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig987.4.1 ID=mRNA_H-akashiwo_Contig987.4.1|Name=mRNA_H-akashiwo_Contig987.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=657bp|location=Sequence derived from alignment at H-akashiwo_Contig987:211319..211975+ (Heterosigma akashiwo CCMP452)
ATGCGGCACGGGCAGGGTCTCCAGGGGCTGCCAGCAGTCTGTGATGGGTG TGGAGAGCCTTTTAGCTTGGAGCATGCCCTGTGCTGCAAGAAGGGGGGCC TTGTGAAGAAAGGGCATGACCATCTGGTGGATGAGAGTTGCCACCTGGCG AGCTTGGCTTATGGGGCTGGGGTGAAGAAGGAGCCTTTCCTGAGGGATGC CAGTGGGAAGGTGCTGGACAAGGACCTTCGGGCGGACTTCATGGCTCTTA GTGTGTGGGAGAGGCAGAGGGTGGCGTTTTTTGACAACCGCATTTTAGAT GCTGACGCACCTTCTCGTTTCAACCGCAATATGAGCTATGTGACTGCCAT GCGCGCCGCAGTACAGGAGAAGAAGAAGAAATACCAGGAGCGCTGCGAGG ACCTGGCTGGGAGCTTCACACCTTTAGTGTGCACGGTGGATGGGGTCTTT CACAGAGAGTTTGTCGCTTTCATGAAGAGGGTGGCTGCTGTGCTTGCGGA GAAATGGCATAGGCCCTATGGGGTGGTGATGTGCTGGGTAAGGGTACGGC TGCAGTTTGCACTGATCCGGGCTGTGGACCTGAGACTACGTGGGTCGAGG AAGGCGTTTCATGGTTTTGGCATGATGGACGGGGCTGGTATGGGTCTGGT GTATTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig987:211319..211975+

>mRNA_H-akashiwo_Contig987.4.1 ID=mRNA_H-akashiwo_Contig987.4.1|Name=mRNA_H-akashiwo_Contig987.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=657bp|location=Sequence derived from alignment at H-akashiwo_Contig987:211319..211975+ (Heterosigma akashiwo CCMP452)
ATGCGGCACGGGCAGGGTCTCCAGGGGCTGCCAGCAGTCTGTGATGGGTG
TGGAGAGCCTTTTAGCTTGGAGCATGCCCTGTGCTGCAAGAAGGGGGGCC
TTGTGAAGAAAGGGCATGACCATCTGGTGGATGAGAGTTGCCACCTGGCG
AGCTTGGCTTATGGGGCTGGGGTGAAGAAGGAGCCTTTCCTGAGGGATGC
CAGTGGGAAGGTGCTGGACAAGGACCTTCGGGCGGACTTCATGGCTCTTA
GTGTGTGGGAGAGGCAGAGGGTGGCGTTTTTTGACAACCGCATTTTAGAT
GCTGACGCACCTTCTCGTTTCAACCGCAATATGAGCTATGTGACTGCCAT
GCGCGCCGCAGTACAGGAGAAGAAGAAGAAATACCAGGAGCGCTGCGAGG
ACCTGGCTGGGAGCTTCACACCTTTAGTGTGCACGGTGGATGGGGTCTTT
CACAGAGAGTTTGTCGCTTTCATGAAGAGGGTGGCTGCTGTGCTTGCGGA
GAAATGGCATAGGCCCTATGGGGTGGTGATGTGCTGGGTAAGGGTACGGC
TGCAGTTTGCACTGATCCGGGCTGTGGACCTGAGACTACGTGGGTCGAGG
AAGGCGTTTCATGGTTTTGGCATGATGGACGGGGCTGGTATGGGTCTGGT
GTATTAA
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