mRNA_H-akashiwo_Contig987.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig987.2.1
Unique NamemRNA_H-akashiwo_Contig987.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK)

HSP 1 Score: 589 bits (1518), Expect = 4.050e-210
Identity = 304/316 (96.20%), Postives = 310/316 (98.10%), Query Frame = 1
Query:  112 VALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSAYFIPSLESRRQAAAVGLTCKLLDGQGRGALSEVQPAVFAPPTNKSTRSSDRLAAQQA 1059
            VALDFK AFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFI NVPQRVREALCLFYADDLTLQKDV+REEGAAQRAAE LNDDLQRLYEFGKEWLLEFEPTKSQELIITNSA+N+KVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHA+AV KEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSA+FIPSLESRRQAAAVGLTCKLLDGQGRGALSEVQP VFAPPT KSTRSSDRLAAQ+A
Sbjct:    1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSAFFIPSLESRRQAAAVGLTCKLLDGQGRGALSEVQP-VFAPPTTKSTRSSDRLAAQRA 315          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK)

HSP 1 Score: 478 bits (1231), Expect = 2.170e-168
Identity = 244/264 (92.42%), Postives = 250/264 (94.70%), Query Frame = 1
Query:   91 ARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGG---VIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 873
            ARKDVRLV LDFK A DKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFI NVPQRVREALCLFYADDLTLQKDV+REEGAAQRAAE LNDDLQRLYEFGKEWLLEFEPTKSQELIITN   + KVTHPPL MGG   +++EEKEQLEALGFTIDPRGNWSLHA+AV KEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML
Sbjct:    1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNLVADNKVTHPPLPMGGGVVMVIEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 264          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK)

HSP 1 Score: 448 bits (1153), Expect = 7.160e-149
Identity = 239/354 (67.51%), Postives = 278/354 (78.53%), Query Frame = 1
Query:    1 IPPNQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNS-AKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSAYFIPSLESRRQAAAVGLTCKLLDGQGRGALSEVQPAVFAPPTNKST--RSSDRLAAQ 1053
            IP NQFGFLP TGT+DVGVILA++IS ALEARKDVRLVALDF+ AFDKVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFVVANG  S  +SIKSGVPQGAIWSPLLFDLF+ NVPQRVREALCLFYADDLTL K ++R   AAQ A   LN DL+RL+ FGKEWLLEFE TKS  L I+NS  K+ K  H P  MGG  V+E+E LE LGF +D +GNWS  A+A    AR+RLGA+RR+A +LDD    M YK FVRSKIEYG+L+YWGAA+G+L  LD +Q SA+ +L       +PSLESRRQAAAVGL CKLLDG+GRG L+E++P VF  PT      R+S R+AA+
Sbjct:  416 IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTISNSKGKDLKGRHIPCRMGGHEVKEQEVLEILGFLVDNKGNWSKFAEATASAARQRLGALRRLAPLLDDDCINMVYKTFVRSKIEYGSLVYWGAADGHLRDLDAIQRSALKLLRKPEQVALPSLESRRQAAAVGLACKLLDGKGRGLLTELKP-VFVDPTQPPPHRRASARIAAR 768          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK)

HSP 1 Score: 192 bits (487), Expect = 3.660e-52
Identity = 119/239 (49.79%), Postives = 149/239 (62.34%), Query Frame = 1
Query:    1 IPPNQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGD----SSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQ-KDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGF-TIDPRGNWSLHAKAVIKEARK 699
            IP NQFGFLP TGT+DVGVILA++IS ALEARKDVRLVALDF+ AFDKVWWRGLLAHLWAVGVRSKA++L +SYL  +    +  G+     +S   I+       +  PL    F+ NV QRVR+ALCLFY +DLTL  K + R   AAQ     L+ DL+RL+ FGKEWLLE E +                    L +G   V+E++ LE LGF   + +G WS  +K+    AR+
Sbjct:  416 IPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPL----FVRNVRQRVRKALCLFYVNDLTLLLKVIGRNNEAAQNVQWDLSQDLKRLFCFGKEWLLELEAS--------------------LGIGEHEVKEQKVLEILGFFNENNKGTWSQFSKSTATAARE 628          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA)

HSP 1 Score: 174 bits (442), Expect = 5.470e-45
Identity = 105/291 (36.08%), Postives = 162/291 (55.67%), Query Frame = 1
Query:    1 IPPNQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 873
            I   QFGF  G  T D    +   +  A + R++ RL+ LD   AFD+VW RGL+A L A+GV     K  ++YL+DR L    +G +S+   I +GVPQG+I  PLLF L+I ++ +++     L YADD ++ + + R E A  RAA  LN DLQ++  +   W + F  +K + L  +N  K+ +  HP L+     + E ++ E LG TI    +W+ H K +  +A KRLG +RR A  L  + +   YK+ VRS +EY + ++ GA    L+ LD +Q  A+ ++
Sbjct:  441 ISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADRELKATISGKTSTARLINAGVPQGSILGPLLFILYIDDLTEKLTNTAML-YADDSSIMRIMERRERA--RAALSLNTDLQKIQNWADCWNVLFGASKCKCLTASN-LKDAEGNHPELNFMNTTLAEVDEAELLGLTIRKELSWTHHIKKMATDAGKRLGLLRRAAPYLTPQQRATIYKSMVRSCMEYASTVWMGACPTSLDLLDAIQRRAIRLI 727          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A3D5S1K1_9BACT (Reverse transcriptase domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D5S1K1_9BACT)

HSP 1 Score: 169 bits (427), Expect = 7.690e-43
Identity = 104/329 (31.61%), Postives = 174/329 (52.89%), Query Frame = 1
Query:   13 QFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRA--AEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSAYFIPSLESRRQAAAVGLTCKLLDGQGRGALSEVQP 993
            Q+GF  G  T D+  ++  RI  +L A  + R VALD   AFDKVW  GL+  L   GV+   F +++S+LSDR + VV +G SS   S+ +GVPQG++  P LF +FI+++P  +   L + YADD T+   +        R   A  L  DL+ + E+G++WL+ F   K++ L +    + +    P +SM G+ + E +  + LG T+    +W+ + + + + A +++G++ R    L + +    YKA +R  +EY   I+ GA+   L  LDR+Q    +++    +  + SL  RR  +++ L  K   G     LS + P
Sbjct:  566 QYGFRSGRSTADILTVINERIYRSLNASGETRAVALDISKAFDKVWHAGLMLKLTGYGVQGSLFDIIKSFLSDREIKVVLDGQSSKAYSVNAGVPQGSVLGPTLFLVFINDLPDNILSKLAI-YADDTTIYSPLESSVDLFDRVELAGELELDLRTVVEWGEKWLVSFNAAKTKLLSVNRFKEPFL---PSVSMNGLQLPESDHAKLLGLTLTNTFSWNQYIEDIARAAARKVGSLYRARGYLSEESIFYLYKATIRPCMEYCCHIWAGASRESLNLLDRIQKRISTIVGPILSSRLQSLSHRRNVSSLSLFYKYFHGHCSNELSLLMP 890          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A210QQ08_MIZYE (RNA-directed DNA polymerase from transposon BS n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QQ08_MIZYE)

HSP 1 Score: 163 bits (412), Expect = 4.270e-42
Identity = 91/291 (31.27%), Postives = 164/291 (56.36%), Query Frame = 1
Query:    1 IPPNQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 873
            + P+Q GF  G    +  + + + I LAL+  K++R+V  D   AFD+VW +GLL  L + G+R+      ++YLSDR   VV NG +S+ +++K+GVPQG+I  PLLF ++I+++ + ++  + LF ADD +L   V+      + +A++LN DL + + + + WL+ F P+K++ L+I  S K  K  HPPL+M    + E    + LG  +   G+W+ H   +I +   ++  +R+    LD  +    Y   +R  ++YG++++    +   E L+ +Q  A  ++
Sbjct:   19 LSPHQSGFRHGDSPSNQLLAIIHDIYLALDNGKEIRMVFCDISKAFDRVWHKGLLCKLSSYGIRNSLLVWFENYLSDRKQRVVINGKNSNWLNVKAGVPQGSILGPLLFLIYINDIVKDIQAKIKLF-ADDTSLYVTVD----IPRVSADILNSDLNKFHNWSQRWLVNFNPSKTETLLI--SRKTIKPFHPPLNMNNTNISEVATHKHLGIFLSGNGHWNEHISYLISKISPKINILRKFKFSLDRYSLQTMYYTLIRPILDYGDILWDCLTKAQSELLENLQLEAARIV 302          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A2H9T4U7_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4U7_9ZZZZ)

HSP 1 Score: 163 bits (412), Expect = 8.530e-41
Identity = 96/291 (32.99%), Postives = 157/291 (53.95%), Query Frame = 1
Query:    1 IPPNQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 873
            + P+Q GF  G   V+  + + + I  AL+  K++R+V  D   AFD+VW +GLL+ L   G+R    K  ++YL +R   VV  G  S+   IK+GVPQG+I  PLLF LFI+++ + +R  + LF ADD +L   ++    + + +A  LN DL++++E+   WL+ F PTK++ L+I  S K     HPPL M  +++ E      LG T+   G W+ H   +I +   +L  +RR    L   +    Y   +R   EYGN+++    +   + L+ +Q  A  ++
Sbjct:  661 LSPHQSGFRHGDSPVNQLLAITHDIYSALDHGKEIRMVFCDISKAFDRVWHKGLLSKLSGFGIRGSLLKWFENYLYNRKQRVVIKGKFSNWSEIKAGVPQGSILGPLLFLLFINDIVKDIRANIKLF-ADDTSLYVIID----SPRISAVDLNFDLRKIHEWSVNWLVNFNPTKTETLLI--SKKTNSPIHPPLHMNNILLSEVSSHRHLGLTLSNNGGWTDHINLIISKVSPKLNILRRFKFTLGRTSLQTLYFTLIRPIFEYGNIVWDNLTKTQSDMLENLQLEAARIV 944          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: T2M4I6_HYDVU (Patched domain-containing protein 2 (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M4I6_HYDVU)

HSP 1 Score: 156 bits (395), Expect = 1.510e-38
Identity = 97/306 (31.70%), Postives = 163/306 (53.27%), Query Frame = 1
Query:   10 NQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEV--LNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYK-VTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSAYFIPSLESRR 918
            NQ+GF     T D+   +  R   AL+   + R +ALD   AFDKVW  GLL  L + GV  K F+ ++S+LS+R + V+  G  SS   + SGVPQG+I  P+LF ++I+++P  +   + LF ADD TL   ++++     R  +   L  DL  + ++G +WL+ F   K+Q L    +A NY+ + + P+ M G  + E   L  LG ++    +W  + +++ K A  ++ ++ R  H L   + +  YK+ +R  +EY   I+ G++   L  LD+VQ   V+++    +  +  L  RR
Sbjct:  854 NQYGFRSSRSTADLLTAVTERFYRALDGGSEARAIALDISKAFDKVWHAGLLHKLASYGVSGKVFESIKSFLSNRFIKVILEGQHSSLFPVTSGVPQGSILGPVLFLIYINDLPDNLSSKVALF-ADDSTLYSCLDKKSSLFDRLEQAADLESDLTSVIDWGSQWLVNFNSKKTQLL----TANNYRNMVNIPILMNGNPLTELSSLRLLGLSVTTDLSWKPYIQSIAKLASAKVASLYRARHFLTSDSILYLYKSLIRPCMEYCCHIWAGSSNDSLSLLDKVQKRIVNVVGPGLSAKLEPLSHRR 1154          
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Match: A0A2H9T4Y5_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4Y5_9ZZZZ)

HSP 1 Score: 152 bits (384), Expect = 1.820e-38
Identity = 88/255 (34.51%), Postives = 141/255 (55.29%), Query Frame = 1
Query:  109 LVALDFKCAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAEVLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSML 873
            ++  D   AFD+VW RGLL+ L + G+    F    +YL +R   VV NG  S+   I +GVPQG+I  PLLF +FI+++   +  A+ LF ADD +L   V     +   +A +LND+L ++ E+ K WL+ F P+K+  L +T S K  K  HP L M   I+ E      LG T+   GNW+ H + +I +A K+L  +R +   +D ++    Y +F+R  +EYG++++     G  + L+ +Q  A  ++
Sbjct:    1 MIFCDISKAFDRVWHRGLLSKLKSFGITGNLFLWFSNYLRNRCQSVVINGKQSNLAYITAGVPQGSILGPLLFLIFINDIVNNISCAIKLF-ADDTSLYVIVE----SPHLSANLLNDNLSKINEWSKTWLVNFNPSKT--LTMTVSKKTNKPIHPSLFMNNTILTEVTSHTHLGITLSANGNWTDHLQHIISKASKKLAVLRNLKFSIDRKSLQTLYCSFIRPLLEYGDIVWDNITLGQSKLLESIQLEAARII 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig987.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8U8_HETAK4.050e-21096.20Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8J9_HETAK2.170e-16892.42Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8N4_HETAK7.160e-14967.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8Z6_HETAK3.660e-5249.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9YR33_BRALA5.470e-4536.08Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum... [more]
A0A3D5S1K1_9BACT7.690e-4331.61Reverse transcriptase domain-containing protein n=... [more]
A0A210QQ08_MIZYE4.270e-4231.27RNA-directed DNA polymerase from transposon BS n=1... [more]
A0A2H9T4U7_9ZZZZ8.530e-4132.99Reverse transcriptase domain-containing protein n=... [more]
T2M4I6_HYDVU1.510e-3831.70Patched domain-containing protein 2 (Fragment) n=1... [more]
A0A2H9T4Y5_9ZZZZ1.820e-3834.51Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig987contigH-akashiwo_Contig987:70734..71792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog34740.HMEL012162-PA
Preferred nameGDAP2
PFAMsCRAL_TRIO_2,Macro
Model size1059
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0008150,GO:0010033,GO:0032526,GO:0033993,GO:0042221,GO:0050896,GO:1901700
Exons1
Evalue3.91e-30
EggNOG OGsCOG2110@1|root,KOG1075@1|root,KOG1075@2759|Eukaryota,KOG2633@2759|Eukaryota,38FDD@33154|Opisthokonta,3BB0M@33208|Metazoa,3CW6H@33213|Bilateria,41U7K@6656|Arthropoda,3SI3Z@50557|Insecta,448DX@7088|Lepidoptera
DescriptionDivergent CRAL/TRIO domain
Cds size1059
COG categoryBK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388068.120366-CDS-H-akashiwo_Contig987:70733..717921681388068.120366-CDS-H-akashiwo_Contig987:70733..71792Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig987 70734..71792 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig987.2.1prot_H-akashiwo_Contig987.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig987 70734..71792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig987.2.1

>prot_H-akashiwo_Contig987.2.1 ID=prot_H-akashiwo_Contig987.2.1|Name=mRNA_H-akashiwo_Contig987.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=353bp
IPPNQFGFLPGTGTVDVGVILANRISLALEARKDVRLVALDFKCAFDKVW
WRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQ
GAIWSPLLFDLFIHNVPQRVREALCLFYADDLTLQKDVNREEGAAQRAAE
VLNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAKNYKVTHPPLSMGGVI
VEEKEQLEALGFTIDPRGNWSLHAKAVIKEARKRLGAIRRIAHMLDDRAK
MMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSAVSMLADSSAYFIP
SLESRRQAAAVGLTCKLLDGQGRGALSEVQPAVFAPPTNKSTRSSDRLAA
QQA
back to top

mRNA from alignment at H-akashiwo_Contig987:70734..71792+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig987.2.1 ID=mRNA_H-akashiwo_Contig987.2.1|Name=mRNA_H-akashiwo_Contig987.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1059bp|location=Sequence derived from alignment at H-akashiwo_Contig987:70734..71792+ (Heterosigma akashiwo CCMP452)
ATCCCGCCCAACCAGTTTGGCTTCCTACCTGGTACGGGGACCGTGGATGT CGGCGTCATCCTCGCCAACAGAATCTCCCTGGCCCTTGAAGCCAGGAAAG ATGTgCGGTTGGTTGCGCTCGACTTCAAGTGTGCCTTTGATAAGGTGTGG TGGCGGGGTCTTCTTGCTCATCTGTGGGCGGTGGGTGTGCGCtCCAAGGC CTTCAAGCTGATGCAGAGCTACTTGTCAGACCGGGCCCTCTTTGTAGTGG CAAACGGTGACAGCTCCAGTCATATGAGCATCAAGTCTGGGGTGCCGCAG GGGGCCATCTGGTCGCCTCTCCTCTTTGACCTCTTCATTCACAACGTCCC ACAGCGAGTCAGGGAGGCTCTATGCCTCTTCTATGCAGATGACCTCACCC TCCAGAAGGATGTAAACAGGGAAGAGGGGGCGGCGCAGAGGGCGGCAGAG GTGCTGAACGATGATCTGCAGCGCCTCTATGAGTTTGGCAAGGAGTGGCT ACTAGAGTTTGAACCTACCAAGTCCCAGGAGCTGATCATCACCAACTCGG CTAAAAATTACAAGGTGACTCACCCTCCTCTATCCATGGGGGGAGTGATT GTTGAAGAGAAGGAGCAGCTGGAGGCGCTGGGTTTCACCATTGATCCGCG AGGTAACTGGTCCCTACATGCCAAGGCAGTAATCAAGGAGGCCCGGAAGA GGCTTGGTGCCATTAGGAGGATCGCCCACATGCTGGATGATCGTGCCAAG ATGATGGCCTACAAGGCTTTTGTACGATCAAAGATTGAGTACGGCAACCT TATCTACTGGGGGGCGGCCGAGGGCTATCTCGAAAAACTTGACAGGGTTC AAAGCAGTGCTGTCTCGATGCTCGCGGACTCGTCTGCCTACTTCATCCCC TCGCTGGAAAGTAGGAGGCAGGCCGCGGCAGTTGGCCTCACCTGCAAGCT GCTCGATGGCCAAGGGCGGGGGGCGCTGAGTGAAGTGCAGCCAGCAGTAT TTGCTCCTCCTACGAATAAGTCCACAAGATCCTCTGACAGACTCGCAGCA CAACAGGCG
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig987:70734..71792+

>mRNA_H-akashiwo_Contig987.2.1 ID=mRNA_H-akashiwo_Contig987.2.1|Name=mRNA_H-akashiwo_Contig987.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1059bp|location=Sequence derived from alignment at H-akashiwo_Contig987:70734..71792+ (Heterosigma akashiwo CCMP452)
ATCCCGCCCAACCAGTTTGGCTTCCTACCTGGTACGGGGACCGTGGATGT
CGGCGTCATCCTCGCCAACAGAATCTCCCTGGCCCTTGAAGCCAGGAAAG
ATGTgCGGTTGGTTGCGCTCGACTTCAAGTGTGCCTTTGATAAGGTGTGG
TGGCGGGGTCTTCTTGCTCATCTGTGGGCGGTGGGTGTGCGCtCCAAGGC
CTTCAAGCTGATGCAGAGCTACTTGTCAGACCGGGCCCTCTTTGTAGTGG
CAAACGGTGACAGCTCCAGTCATATGAGCATCAAGTCTGGGGTGCCGCAG
GGGGCCATCTGGTCGCCTCTCCTCTTTGACCTCTTCATTCACAACGTCCC
ACAGCGAGTCAGGGAGGCTCTATGCCTCTTCTATGCAGATGACCTCACCC
TCCAGAAGGATGTAAACAGGGAAGAGGGGGCGGCGCAGAGGGCGGCAGAG
GTGCTGAACGATGATCTGCAGCGCCTCTATGAGTTTGGCAAGGAGTGGCT
ACTAGAGTTTGAACCTACCAAGTCCCAGGAGCTGATCATCACCAACTCGG
CTAAAAATTACAAGGTGACTCACCCTCCTCTATCCATGGGGGGAGTGATT
GTTGAAGAGAAGGAGCAGCTGGAGGCGCTGGGTTTCACCATTGATCCGCG
AGGTAACTGGTCCCTACATGCCAAGGCAGTAATCAAGGAGGCCCGGAAGA
GGCTTGGTGCCATTAGGAGGATCGCCCACATGCTGGATGATCGTGCCAAG
ATGATGGCCTACAAGGCTTTTGTACGATCAAAGATTGAGTACGGCAACCT
TATCTACTGGGGGGCGGCCGAGGGCTATCTCGAAAAACTTGACAGGGTTC
AAAGCAGTGCTGTCTCGATGCTCGCGGACTCGTCTGCCTACTTCATCCCC
TCGCTGGAAAGTAGGAGGCAGGCCGCGGCAGTTGGCCTCACCTGCAAGCT
GCTCGATGGCCAAGGGCGGGGGGCGCTGAGTGAAGTGCAGCCAGCAGTAT
TTGCTCCTCCTACGAATAAGTCCACAAGATCCTCTGACAGACTCGCAGCA
CAACAGGCG
back to top