mRNA_H-akashiwo_Contig984.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 347 bits (890), Expect = 5.810e-118 Identity = 166/188 (88.30%), Postives = 179/188 (95.21%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKALN 564 TRPELAF VHKLQRTQ NPEPKHFEAVQRAFRYLKGTQSESLRLGGDL+LRA+SDSDFC R+DGKSVTGY+LFLGDAPIVWS KLQGAVTTSTVEAEYLALRSAVKDIMWLR LL ++GCPQ +PTPVVEDNSAC+EWANDM++N+RNRHFHVSYHLAKEQVSLG IRMF+I+THDQVADILTKALN Sbjct: 149 TRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALN 336
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 172 bits (437), Expect = 1.850e-46 Identity = 84/188 (44.68%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKALN 564 T PE+A+++H L + ++P A RYL T+ + + LGG L L AY+D+DFC+ R G+S +G+ +FLG +PI+WS ++Q VT +T EAEY++LR+AV D+MWL+ LL LG +Q P+ EDN ACI WAND +++ RH HVSYH KE V I + ++ T Q+AD+ TK L+ Sbjct: 796 TFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGY-KQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: UPI000C1D5F2C (uncharacterized protein LOC111391063 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D5F2C) HSP 1 Score: 150 bits (379), Expect = 1.330e-40 Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKA 558 TRP++A+ VH + + S P H+ AV R RYL+GT +SL L+LRAYSD+D+ + ID KS TG+ +FLGD+ I W K Q V+ S+ EAEY A+ S +I+WLR+LLAD+G PTP+ DN++ I+ +++ V + R +H + HL + + G I + F+ + Q+AD TK+ Sbjct: 176 TRPDIAYGVHIVSQFVSAPTTVHWAAVVRILRYLRGTCFQSLLFPSTSSLVLRAYSDADWASDPIDRKSTTGFCVFLGDSLISWKSKKQTVVSCSSTEAEYRAMGSTTTEIVWLRWLLADMGVSHSSPTPMYCDNTSAIQISHNSVFHERTKHIKIDCHLVRHHLQTGTISLSFVSSSLQLADFFTKS 363
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.620e-40 Identity = 81/189 (42.86%), Postives = 112/189 (59.26%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLI--LRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKAL 561 TRP++A AV +L R NP +H++A + RYLKGT++ + GG + L AYSD+D+ + R D +SV+G VL L AP+VW Q V ST EAEY+AL VK+ MW R LL +LG Q+ T + EDN I A + R +H + YH +E++ G I + +I T +QVAD LTK L Sbjct: 187 TRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.340e-39 Identity = 79/189 (41.80%), Postives = 110/189 (58.20%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLI--LRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKAL 561 TRP++A AV +L R NP +H++A + RYLKGT++ + G + L AYSD+D+ + R D +SV+G VL L AP+VW Q V ST E EY+AL VK+ MW R LL +LG Q+ T + EDN I A + R +H + YH +E++ G I + +I T +QVAD LTK L Sbjct: 107 TRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: A0A2I0W4P1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W4P1_9ASPA) HSP 1 Score: 147 bits (372), Expect = 2.200e-39 Identity = 76/189 (40.21%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLI-LRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKALN 564 TRP++ +AV+K + P +F+A++R RY+KGT + L L L ++ DSD+ + D KS TGY FLG + + W +K Q + S+ EAEY AL +A D++W+R LL +LGCPQ +PT + DN++ I AN+ V + R +H V H +E + +I++ I T DQ+ADI TKAL+ Sbjct: 178 TRPDITYAVNKACQFMHQPTDANFDALKRILRYIKGTLNIGLPLSRHSFDLSSFVDSDWTGDQKDRKSTTGYCTFLGRSLVTWCVKKQSTIARSSTEAEYRALAAAAADLIWIRQLLHELGCPQNNPTKLFCDNTSAIALANNPVFHARTKHIEVDCHYIRECIKNNSIQVHHISTKDQIADIFTKALS 366
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: UPI001E694486 (secreted RxLR effector protein 161-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E694486) HSP 1 Score: 142 bits (359), Expect = 2.220e-39 Identity = 73/190 (38.42%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKALN 564 TRP++A+AVH + + +P H+ AV R RYL+GT+ +S+ L LRAYS +D+ D KS TG+ +FLGD+ I W K Q V+ S+ E EY A+ S +I+WLR+LL+D+G P +PTP+ DN + I+ A + V + R +H + H + + I + F+ + Q+AD+ TK L+ Sbjct: 9 TRPDIAYAVHVISQFVVSPTTVHWAAVLRILRYLQGTRFQSILFPSSSALELRAYSAADWAGDPTDRKSTTGFCIFLGDSLISWKSKKQDIVSRSSTEVEYRAMASTTTEIVWLRWLLSDMGIPLSEPTPMYCDNKSAIQIAYNSVFHERTKHIEIDCHFTRHHLQQRTITLPFVSSSLQIADLFTKTLS 198
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: UPI001E6976E5 (uncharacterized mitochondrial protein AtMg00810-like n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E6976E5) HSP 1 Score: 144 bits (363), Expect = 3.810e-39 Identity = 75/187 (40.11%), Postives = 112/187 (59.89%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTK 555 TRP++A+AVH + + +P H+ AV R RYL+GTQ +SL L L AYSD+D+ ID KS TG+ +FLG++ I W K Q V+ S+ EAEY A+ S +I+WL +LL+D+G PTP+ DN + I+ A++ V + R +H + H + + G I + FI + Q+AD+ TK Sbjct: 82 TRPDIAYAVHVVSQFVVSPTTVHWAAVLRILRYLRGTQFQSLLFPSSSSLELCAYSDADWAGDPIDRKSTTGFCIFLGESLISWKSKKQDIVSRSSTEAEYRAMASTTTEIVWLHWLLSDMGISLSQPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTRHHLQHGTITLPFISSSLQIADLFTK 268
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: A0A2N9FRH6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FRH6_FAGSY) HSP 1 Score: 144 bits (362), Expect = 5.370e-39 Identity = 72/188 (38.30%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTKA 558 TRP++++AVH++ + S P H+ AV R +YLK T L LILRAY D+D+ D +S TGY LG + I W K Q V S+ EAEY AL +++WLR+LL DLG TP+ DN + I+ A + V + R +H + HL + + G++++ + +HDQ+ADI TK+ Sbjct: 82 TRPDISYAVHQVSQFMSAPRSTHYAAVLRILQYLKSTLFHGLHFSAQSPLILRAYFDADWAEDPTDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYCALTDTTSELLWLRWLLQDLGVSTSSATPIYCDNRSAIQIARNDVFHERTKHIEIDCHLVRHHLLQGSLQLISVSSHDQLADIFTKS 269
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Match: UPI001E695AE6 (uncharacterized mitochondrial protein AtMg00810-like n=3 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E695AE6) HSP 1 Score: 146 bits (368), Expect = 5.580e-39 Identity = 76/187 (40.64%), Postives = 113/187 (60.43%), Query Frame = 1 Query: 1 TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLILRAYSDSDFCAGRIDGKSVTGYVLFLGDAPIVWSLKLQGAVTTSTVEAEYLALRSAVKDIMWLRYLLADLGCPQQDPTPVVEDNSACIEWANDMVINRRNRHFHVSYHLAKEQVSLGAIRMFFIRTHDQVADILTK 555 TRP++A+AVH + + +P H+ AV R RYL+GTQ +SL L L AYSD+D+ ID KS TG+ +FLG++ I W K Q V+ S+ EAEY A+ S +I+WLR+LL+D+G PTP+ DN + I+ A++ V + R +H + H + + G I + FI + Q+AD+ TK Sbjct: 176 TRPDIAYAVHVVSQFVVSPTTVHWAAVLRILRYLRGTQFQSLLFPSSSSLELCAYSDADWAGDPIDRKSTTGFCIFLGESLISWKSKKQDIVSRSSTEAEYRAMASTTTEIVWLRWLLSDMGISLSQPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTRHHLQHGTITLPFISSSLQIADLFTK 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig984.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig984.4.1 >prot_H-akashiwo_Contig984.4.1 ID=prot_H-akashiwo_Contig984.4.1|Name=mRNA_H-akashiwo_Contig984.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=188bp TRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYLKGTQSESLRLGGDLILback to top mRNA from alignment at H-akashiwo_Contig984:238817..239380- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig984.4.1 ID=mRNA_H-akashiwo_Contig984.4.1|Name=mRNA_H-akashiwo_Contig984.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=564bp|location=Sequence derived from alignment at H-akashiwo_Contig984:238817..239380- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig984:238817..239380- >mRNA_H-akashiwo_Contig984.4.1 ID=mRNA_H-akashiwo_Contig984.4.1|Name=mRNA_H-akashiwo_Contig984.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=564bp|location=Sequence derived from alignment at H-akashiwo_Contig984:238817..239380- (Heterosigma akashiwo CCMP452)back to top |