mRNA_H-akashiwo_Contig98.39.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig98.39.1
Unique NamemRNA_H-akashiwo_Contig98.39.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A7S2UYV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV3_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 7.580e-143
Identity = 195/298 (65.44%), Postives = 240/298 (80.54%), Query Frame = 1
Query:    1 MEFLGIGPKARVEISF-DGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVG-KQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSY-SNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRK 885
            M   G GP A + + F D AT   K +    +   + L IF G E VSG  ++++PPGKR+EHQGIKVE+IGQIEMFYDRG+SY+FTS+VRELEA G+M G  + Y F F  VDKP+ESY+G+N+RLRYFVRVT+T+SY SNI++E  F V  P   E  + N LKMEVGIE+CLHIEFEY+K++YHL DVI+GK++FLLV+IKIKHMEVAI+RREA G+ +NQYNETET+TK+E+MDGAPVKGEC+P+RLFL  YNLTPTYRN+NNRFSVRY+LNLVLVD EDRRYFKQQE+  WR+
Sbjct:    1 MSLFGFGPAAEIRLDFADSATRTRKAVGAVGQKDSKQLLIFHGEEAVSGTVDVVLPPGKRLEHQGIKVEMIGQIEMFYDRGNSYDFTSIVRELEAAGVMEGGSRNYTFDFSTVDKPYESYSGINVRLRYFVRVTITRSYGSNIIKEEEFLVQTPSTEETAMTNTLKMEVGIEDCLHIEFEYDKNRYHLADVILGKVFFLLVRIKIKHMEVAIIRREACGTGSNQYNETETLTKFEIMDGAPVKGECIPVRLFLSQYNLTPTYRNVNNRFSVRYYLNLVLVDEEDRRYFKQQEVIFWRQ 298          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A836CB39_9STRA (Vacuolar protein sorting-associated protein 26-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB39_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 8.570e-137
Identity = 193/299 (64.55%), Postives = 239/299 (79.93%), Query Frame = 1
Query:    1 MEFLGIGPKARVEISFDGATNRPKEILDATRPGE----EPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYSNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRK 885
            M + G+ P A V + FDGA  RP     A  PG+    E + IF G+E VSG   ++V PGK+++H GIKVE+IGQIE++YDRG+ Y+F+SLVREL+    +VG +Q+ F F  VDKP+ESY+G+N+RLRYFVRVT+T++Y  I ++  F V N    EP +N  LKMEVGIEECLHIEFEY+KSKYHL+DVIIGKIYFLLV+IKIKHME+A+VRREAAGS    YNE+ET+ KYEVMDGAPVKGEC+PLRLFLKPY+LTPTY++INN+FSVRY+LNLVLVD EDRRYFKQQE+ LWR+
Sbjct:    1 MAWFGLQPGATVLLEFDGAERRPSR---APPPGDKKALERVPIFVGSEPVSGAVTVLVAPGKKVDHMGIKVEMIGQIELYYDRGNHYKFSSLVRELDTANSLVGNRQFLFDFSNVDKPYESYSGLNVRLRYFVRVTITRNYGTITKDFEFAVQNVEPEEPVMNPSLKMEVGIEECLHIEFEYDKSKYHLRDVIIGKIYFLLVRIKIKHMELAVVRREAAGSGATVYNESETVVKYEVMDGAPVKGECVPLRLFLKPYDLTPTYKSINNKFSVRYYLNLVLVDEEDRRYFKQQEVVLWRR 296          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A6S8R4Z0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8R4Z0_9STRA)

HSP 1 Score: 384 bits (987), Expect = 1.140e-131
Identity = 184/293 (62.80%), Postives = 236/293 (80.55%), Query Frame = 1
Query:   10 LGIGPKA-RVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSY-SNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWR 882
            LG G    R+ ++FDG   RP+  L    P   P  +F   E V+GV EI VP GKR+EHQGIK+E +GQIE+F+DRG+ Y+FT ++REL+ PG+++G+Q+Y F     +KP+ESYNG+N+RLRYFVRVTVT+ Y S++++E  F V    +  PE N  +KMEVGIEECLHIEFEY+KSKYHL DV++GK+YFLLV+IKIKHME+A++RREAAG+  NQ+NE+ETITKYEVMDGAPV+GEC+P+RLFL+ +NLTPTYR INN+FSVRY+LNLVLVD E+RRYFKQQEITL+R
Sbjct:    5 LGYGKSDDRISVTFDGDAQRPRRRLS---PNATPAPVFAAVEPVTGVVEIRVPAGKRLEHQGIKIECVGQIELFHDRGTYYDFTCVLRELDVPGVLMGQQRYAFDLSHAEKPYESYNGLNVRLRYFVRVTVTRGYASSLIKEQEFIVQVS-QPAPETNTPVKMEVGIEECLHIEFEYDKSKYHLADVVVGKVYFLLVRIKIKHMELAVIRREAAGAGPNQHNESETITKYEVMDGAPVRGECVPIRLFLRNFNLTPTYRGINNKFSVRYYLNLVLVDQEERRYFKQQEITLYR 293          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: D8LS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS34_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 4.960e-131
Identity = 185/293 (63.14%), Postives = 230/293 (78.50%), Query Frame = 1
Query:   10 LGIGPKARVEISFDGATNRP-KEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYSNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRK 885
             G  P   + + FD    RP K      R   E L IF G+E VSG A ++V PGK+++H GIK ELIGQIE++YDRG+ YEF+S+VREL+  G +VG +QY F F+  +KP+ESY+G+N+RLRYFVRVT++    N+ +E +F V N ++ EPE  + LKMEVGIE+CLHIEFEY+KS YHLQDV+IGKIYFLLV+IKIKHME+AI+RRE AG+ +NQYNE+ETI KYEVMDGAP KGEC+PLR+FLKPY LTPTYR   N+F+V+YFLNLVLVD EDRRYFKQQE+TLWRK
Sbjct:    5 FGFNPGVTILVEFDHIDKRPTKPSTPGDRRASEALPIFEGSEAVSGTATVLVAPGKKVDHLGIKAELIGQIELYYDRGNHYEFSSVVRELDTAGALVGNRQYRFDFNLAEKPYESYSGLNVRLRYFVRVTISTRGKNVTKEMDFVVQN-IQQEPEALDSLKMEVGIEDCLHIEFEYDKSAYHLQDVVIGKIYFLLVRIKIKHMEMAIIRRETAGTGSNQYNESETIIKYEVMDGAPAKGECVPLRVFLKPYALTPTYRG-TNKFTVKYFLNLVLVDEEDRRYFKQQEVTLWRK 295          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: L8H8R6_ACACA (Vacuolar protein sortingassociated protein 26, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8R6_ACACA)

HSP 1 Score: 372 bits (955), Expect = 3.670e-126
Identity = 183/296 (61.82%), Postives = 230/296 (77.70%), Query Frame = 1
Query:    1 MEFLGIGPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSY-SNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRK 885
            M FL  G    V I  DG   R K I   T  G E L ++ G+E V GVA++    GK+ EHQGIKV+ IGQ+EMFY+RGSS+EF SL +EL A G + G  ++PF F  V+K +ESY+G+N+RLRYFVRVTVT+   S +  E + +VHN  ++ P+VNN +KMEVGIE+CLHIEFEYN+SKYHL DVIIGKIYFLLV+IKIKHME+AI++RE+ GS  N YNE+ETITKYE+MDGAPV+GE +P+RLFL P+ LTPTYRN++++FS++Y+LNLVLVD EDRRYFKQQEI LWRK
Sbjct:    1 MAFL-FGSPIVVTILLDGVEER-KTIDFTTENGSEKLPLYIGDETVKGVAKVTCKEGKKYEHQGIKVDFIGQVEMFYERGSSHEFVSLSKELAAAGEITGVNEFPFEFSKVEKQYESYHGINVRLRYFVRVTVTRGLASTVTTEKDIWVHN-YQVNPDVNNPIKMEVGIEDCLHIEFEYNRSKYHLTDVIIGKIYFLLVRIKIKHMEIAIIKRESTGSGPNLYNESETITKYEIMDGAPVRGESIPIRLFLTPFELTPTYRNVHSKFSLKYYLNLVLVDEEDRRYFKQQEIALWRK 293          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A2R6X8U2_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X8U2_MARPO)

HSP 1 Score: 369 bits (948), Expect = 1.040e-125
Identity = 179/297 (60.27%), Postives = 229/297 (77.10%), Query Frame = 1
Query:    1 MEFL--GIGPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYS-NIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWR 882
            M FL     P   V + F  A  RP+  +        P+ +F+  E V G   I   PGK++EH G+K+EL+GQIE+++DRGS Y+FTSLVREL+ PG +V ++ +PF F  V+ P+ESYNGVN+RLRY ++VT+++SY+ NIV+  +F+V N     PE+NN +KMEVGIE+CLHIEFEY+KSKYHL+DVIIGKIYFLLV+IKIKHME+ I RRE+ GS  N YNETET+ KYE+MDGAPV+GE +P+RLFL PY+LTPTYRNINN+FSV+Y+LNLVLVD EDRRYFKQQEIT+ R
Sbjct:    1 MNFLIGAFKPPCTVSVEFKDAETRPEANIKKENGQMAPVPLFQSQESVVGEVRIEPLPGKKVEHMGVKIELLGQIELYFDRGSFYDFTSLVRELDVPGEIVDRKTFPFEFSTVEMPYESYNGVNVRLRYILKVTISRSYATNIVEYKDFWVRN-FSPPPEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIKIKHMELEIRRRESTGSGPNTYNETETLAKYEIMDGAPVRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMMR 296          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A8K0KLQ4_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KLQ4_LADFU)

HSP 1 Score: 367 bits (942), Expect = 1.570e-123
Identity = 179/296 (60.47%), Postives = 220/296 (74.32%), Query Frame = 1
Query:    1 MEFLGIGPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVP-PGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYSNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRK 885
            M F G G  A ++I  DG   R    + +    +E   ++   E VSG   + +  PG R+EHQGIK+E IGQIE++YDRG+ +EFTSLV+EL  PG +     YPF F  V+KP ESY G N+RLRYF+RVT+ +  S+IV+E +  VH  L   PE+NN +KMEVGIEECLHIEFEYNKSKYHL+DVI+GKIYFLLV+IKIKHME+AI+RRE  GS  N Y E ETI KYE+MDGAPV+GE +P+R+FL  Y+LTPT R+IN +FSVRYFLNLVL+D EDRRYFKQQEITLWRK
Sbjct:    5 MSFFGFGQGAEIDIVLDGTETRKMAEIKSEDGKKERHLLYYDGETVSGKVNVTLKKPGSRLEHQGIKIEFIGQIELYYDRGNHHEFTSLVKELARPGELTNHVSYPFEFLNVEKPFESYTGSNVRLRYFLRVTIVRRLSDIVREVDLVVHT-LSSYPEMNNSIKMEVGIEECLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIAIIRRETTGSGPNMYTENETIAKYEIMDGAPVRGESIPIRVFLAGYDLTPTMRDINKKFSVRYFLNLVLMDEEDRRYFKQQEITLWRK 299          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A388M037_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M037_CHABU)

HSP 1 Score: 363 bits (932), Expect = 2.790e-123
Identity = 174/297 (58.59%), Postives = 229/297 (77.10%), Query Frame = 1
Query:    1 MEFLG--IGPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYS-NIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWR 882
            M FL    GP   + I F  A  R +  +       E + +F+G E + G   I   PGK++EH G+K+EL+GQIE+++DR + Y+FTSLVRE++ PG +  K+ YPF F  V+  +ESYNGVN+RLRY ++VT+++SY+ NIV+E +F+V N   + PE+NN +KMEVGIE+CLHIEFEY+KSKYHL+DVI+GKIYFLLV+IKIKHME+ + RRE+ GS  N Y+E+ET+ KYE+MDGAPV+GE +P+RLFL PY LTPTYRNINN+F+VRY+LNLVLVD EDRRYFKQQEITL+R
Sbjct:    1 MNFLSGAFGPTCTISIDFSDADTRKQASVKKENGQTELVALFQGGESLVGNVRIEPLPGKKVEHTGVKIELLGQIELYFDRSNFYDFTSLVREMDTPGEITDKKIYPFEFSNVEMQYESYNGVNVRLRYILKVTISRSYATNIVKEKDFWVRNVSPL-PEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIVGKIYFLLVRIKIKHMELEVRRRESTGSVPNAYHESETLAKYEIMDGAPVRGESIPIRLFLSPYELTPTYRNINNKFNVRYYLNLVLVDEEDRRYFKQQEITLYR 296          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A0A6M2DW70_9NEOP (Putative membrane coat complex retromer subunit vps26 n=2 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DW70_9NEOP)

HSP 1 Score: 365 bits (938), Expect = 5.200e-123
Identity = 177/296 (59.80%), Postives = 228/296 (77.03%), Query Frame = 1
Query:    1 MEFLGIGPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIV-PPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYSNIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRK 885
            M FLG G  A ++I FDGA NR    +      +E   ++   E VSG   + +  PG ++EHQGIKVELIGQIE++YDRG+ +EFTSL++EL  PG ++    YPF F  V+KP+E Y G ++RLRYF+RVTV +  S+I++E +  VH  L   PE+N  +KMEVGIE+CLHIEFEYNKSKYHL+DVI+GKIYFLLV+IKIKHME+AI+++E +GSA + ++ETETI KYE+MDGAPVKGE +P+R+FL  Y+LTPT R+IN +FSVRY+LNLVL+D EDRRYFKQQEITLWRK
Sbjct:    1 MNFLGFGQTADIDIVFDGAANRKMTDVKMEDGKKERQLLYYDGETVSGKVNVTLRKPGTKLEHQGIKVELIGQIELYYDRGNHHEFTSLIKELARPGDLLQNTSYPFEFANVEKPYEVYTGASVRLRYFLRVTVIRRLSDIIKEIDIAVHT-LSSYPEMNVPIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIAIIKKETSGSAPSPFSETETIAKYEIMDGAPVKGESIPIRVFLAGYDLTPTMRDINKKFSVRYYLNLVLMDTEDRRYFKQQEITLWRK 295          
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Match: A9T458_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9T458_PHYPA)

HSP 1 Score: 362 bits (928), Expect = 1.130e-122
Identity = 173/289 (59.86%), Postives = 226/289 (78.20%), Query Frame = 1
Query:   19 GPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVAEIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVGKQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYS-NIVQEANFFVHNPLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKIKIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFLKPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWR 882
            GP   + I F  A  R +  +         + +F G E V G   I   PGK++EH G+K+EL+GQIE+++DRGS Y+FTSLVREL+ PG ++ ++ YPF F  V+  +ESYNGVN+RLRY ++VT+++SY+ NIV+  +F+V N    +PE+NN +KMEVGIE+CLHIEFEY+KSKYHL+DVI+GKIYFLLV+IKIKHME+ I RRE+ GS  N YNE+ET+ KYE+MDGAPV+GE +P+RLFL PY+LTPTYRNINN+FSV+Y+LNLVLVD EDRRYFKQQEIT++R
Sbjct:    9 GPPCSISIDFADAETRKQASVKKENGQTIMVPLFLGQESVFGEVRIDPLPGKKVEHTGVKIELLGQIELYFDRGSFYDFTSLVRELDVPGEILERKTYPFEFSTVEMQYESYNGVNVRLRYILKVTISRSYATNIVEYKDFWVRN-YSPQPEINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIVGKIYFLLVRIKIKHMELEIRRRESTGSGPNTYNESETLAKYEIMDGAPVRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMYR 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig98.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UYV3_9STRA7.580e-14365.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CB39_9STRA8.570e-13764.55Vacuolar protein sorting-associated protein 26-dom... [more]
A0A6S8R4Z0_9STRA1.140e-13162.80Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D8LS34_ECTSI4.960e-13163.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
L8H8R6_ACACA3.670e-12661.82Vacuolar protein sortingassociated protein 26, put... [more]
A0A2R6X8U2_MARPO1.040e-12560.27Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A8K0KLQ4_LADFU1.570e-12360.47Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A388M037_CHABU2.790e-12358.59Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A6M2DW70_9NEOP5.200e-12359.80Putative membrane coat complex retromer subunit vp... [more]
A9T458_PHYPA1.130e-12259.86Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig98contigH-akashiwo_Contig98:1579380..1580276 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LS34
Preferred nameVPS26B
PFAMsVps26
Model size897
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01876,ko:K18466
KEGG ReactionR05577
KEGG Pathwayko00970,ko04144,map00970,map04144
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002376,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0008104,GO:0008150,GO:0008565,GO:0009894,GO:0009966,GO:0009987,GO:0010008,GO:0010033,GO:0010506,GO:0010646,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016055,GO:0016192,GO:0016197,GO:0016241,GO:0016482,GO:0016787,GO:0019222,GO:0023051,GO:0023052,GO:0030111,GO:0030139,GO:0030904,GO:0030906,GO:0031090,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034097,GO:0034341,GO:0034613,GO:0042147,GO:0042221,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045087,GO:0045184,GO:0045185,GO:0045335,GO:0046907,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0051716,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071702,GO:0071705,GO:0097422,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:0098876,GO:0198738,GO:1905114,GO:1990126
Exons1
Evalue8.13e-132
EggNOG OGsKOG3063@1|root,KOG3063@2759|Eukaryota
Ec32 ortholog descriptionVacuolar protein sorting protein 26 related
Ec32 orthologEc-08_001990.1
EC6.1.1.12
Descriptionretrograde transport, endosome to Golgi
Cds size897
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388066.7009752-CDS-H-akashiwo_Contig98:1579379..15802761681388066.7009752-CDS-H-akashiwo_Contig98:1579379..1580276Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig98 1579380..1580276 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig98.39.1prot_H-akashiwo_Contig98.39.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig98 1579380..1580276 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig98.39.1

>prot_H-akashiwo_Contig98.39.1 ID=prot_H-akashiwo_Contig98.39.1|Name=mRNA_H-akashiwo_Contig98.39.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=299bp
MEFLGIGPKARVEISFDGATNRPKEILDATRPGEEPLCIFRGNEVVSGVA
EIIVPPGKRMEHQGIKVELIGQIEMFYDRGSSYEFTSLVRELEAPGIMVG
KQQYPFSFDPVDKPHESYNGVNIRLRYFVRVTVTKSYSNIVQEANFFVHN
PLEIEPEVNNQLKMEVGIEECLHIEFEYNKSKYHLQDVIIGKIYFLLVKI
KIKHMEVAIVRREAAGSATNQYNETETITKYEVMDGAPVKGECLPLRLFL
KPYNLTPTYRNINNRFSVRYFLNLVLVDVEDRRYFKQQEITLWRKISS*
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mRNA from alignment at H-akashiwo_Contig98:1579380..1580276+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig98.39.1 ID=mRNA_H-akashiwo_Contig98.39.1|Name=mRNA_H-akashiwo_Contig98.39.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig98:1579380..1580276+ (Heterosigma akashiwo CCMP452)
ATGGAGTTCCTCGGTATTGGCCCCAAAGCTCGGGTCGAAATCTCCTTTGA TGGCGCCACTAATCGTCCCAAGGAGATTTTGGATGCAACAAGACCAGGGG AAGAGCCTCTGTGTATTTTCAGAGGCAATGAGGTTGTTTCAGGCGTTGCT GAAATTATCGTTCCACCGGGAAAGCGAATGGAGCATCAGGGCATTAAAGT TGAGCTGATCGGCCAAATTGAGATGTTTTACGATCGAGGAAGTAGTTATG AGTTTACTTCGCTTGTGAGGGAGCTCGAGGCGCCCGGGATAATGGTGGGG AAACAGCAATACCCATTTTCATTCGATCCCGTGGACAAGCCACATGAATC ATATAACGGGGTGAATATCCGCCTTCGCTACTTTGTGAGGGTTACGGTTA CAAAAAGCTACAGTAATATTGTCCAAGAGGCAAATTTTTTTGTTCATAAT CCCCTGGAGATTGAACCAGAGGTAAATAACCAGCTGAAAATGGAGGTTGG GATTGAAGAGTGCCTGCACATTGAGTTTGAATACAACAAATCAAAATATC ACCTTCAGGATGTGATCATTGGCAAGATATATTTCTTGCTAGTCAAGATT AAAATCAAACACATGGAGGTTGCAATCGTTCGACGGGAAGCAGCTGGTAG TGCTACAAACCAGTACAACGAAACTGAAACAATAACAAAATATGAAGTGA TGGATGGTGCACCAGTCAAGGGCGAGTGTCTTCCCCTTCGTCTTTTCCTG AAGCCATACAACTTGACTCCAACATACAGAAACATCAATAACCGTTTCTC TGTGAGATACTTCTTGAACTTGGTCTTGGTGGATGTTGAAGACAGAAGGT ATTTCAAGCAGCAAGAGATTACTTTGTGGAGAAAGATCAGCAGTTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig98:1579380..1580276+

>mRNA_H-akashiwo_Contig98.39.1 ID=mRNA_H-akashiwo_Contig98.39.1|Name=mRNA_H-akashiwo_Contig98.39.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=897bp|location=Sequence derived from alignment at H-akashiwo_Contig98:1579380..1580276+ (Heterosigma akashiwo CCMP452)
ATGGAGTTCCTCGGTATTGGCCCCAAAGCTCGGGTCGAAATCTCCTTTGA
TGGCGCCACTAATCGTCCCAAGGAGATTTTGGATGCAACAAGACCAGGGG
AAGAGCCTCTGTGTATTTTCAGAGGCAATGAGGTTGTTTCAGGCGTTGCT
GAAATTATCGTTCCACCGGGAAAGCGAATGGAGCATCAGGGCATTAAAGT
TGAGCTGATCGGCCAAATTGAGATGTTTTACGATCGAGGAAGTAGTTATG
AGTTTACTTCGCTTGTGAGGGAGCTCGAGGCGCCCGGGATAATGGTGGGG
AAACAGCAATACCCATTTTCATTCGATCCCGTGGACAAGCCACATGAATC
ATATAACGGGGTGAATATCCGCCTTCGCTACTTTGTGAGGGTTACGGTTA
CAAAAAGCTACAGTAATATTGTCCAAGAGGCAAATTTTTTTGTTCATAAT
CCCCTGGAGATTGAACCAGAGGTAAATAACCAGCTGAAAATGGAGGTTGG
GATTGAAGAGTGCCTGCACATTGAGTTTGAATACAACAAATCAAAATATC
ACCTTCAGGATGTGATCATTGGCAAGATATATTTCTTGCTAGTCAAGATT
AAAATCAAACACATGGAGGTTGCAATCGTTCGACGGGAAGCAGCTGGTAG
TGCTACAAACCAGTACAACGAAACTGAAACAATAACAAAATATGAAGTGA
TGGATGGTGCACCAGTCAAGGGCGAGTGTCTTCCCCTTCGTCTTTTCCTG
AAGCCATACAACTTGACTCCAACATACAGAAACATCAATAACCGTTTCTC
TGTGAGATACTTCTTGAACTTGGTCTTGGTGGATGTTGAAGACAGAAGGT
ATTTCAAGCAGCAAGAGATTACTTTGTGGAGAAAGATCAGCAGTTAA
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