mRNA_H-akashiwo_Contig973.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig973.2.1
Unique NamemRNA_H-akashiwo_Contig973.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 553 bits (1424), Expect = 2.470e-189
Identity = 284/528 (53.79%), Postives = 349/528 (66.10%), Query Frame = 1
Query:    1 AKFPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAK-------------------------------DIAKEQEKDSFCGSIMTYL-------------------------------------------FQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGD 1362
            +KFPLPT REMFD LA ++YF S+DMLWAYWS+PLR+ DK KTAFT+RN+KY +  MCFGLTNA ATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL +L +IF+RM AANLKFKLPKC+FGA+Q+P+LGH+ +REGLKPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV  F+ IA PLY+LTK+ PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS  GLGA+L ++T+ G +P+AYASR+CS TEANYSATELECLGVIYA+QQFRCY++GRE+TL+TDHK+L+ LK  KN +GRRARW++TLMEF  Y TQ    +                           N V    + Q  +  Q  K                               DI+K Q++D FCG IM YL                                            Q+VVP  L   +L+WAH+GAFGAHIGR+KAL+ L +GY+W NMA D
Sbjct:  163 SKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFM-YNTQYRKGKLMAPADALSRLPRAGAIQPKEGEADDENIVAAITRAQAGEAQQLKKQTRKRTRMVTEEEPQEKMSETEEKQLGIRPEDISKAQQEDEFCGPIMEYLKTPGGNKTVSREIVHWSRYMILEKGLLWHQYEYQGDNRRRGTRIQLVVPTALHEVMLQWAHQGAFGAHIGRDKALEILRQGYFWVNMARD 689          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 511 bits (1315), Expect = 1.440e-175
Identity = 238/337 (70.62%), Postives = 289/337 (85.76%), Query Frame = 1
Query:    1 AKFPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQ 1011
            +KFPLPT REMFD LA ++YF S+DMLWAYWS+PLR+ DK KTAFT+RN+KY +  MCFGLTNA ATFSHLVNKVFQG   +FALCFLDDVL +S + F+ HL +L +IF+RM AANLKFKLPKC+FGA+Q+P+LGH+ +REGLKPDPKKIEAV+ +RRP SKKQVRQ LGLASYYRQFV  F+ IA PLY+LTK+ PKGV W DDCEW++Q +KD L S P+L+YPR+D+PFIVETDAS  GLGA+L ++T+ G +P+AYASR+CS TEANYSATELECLGVIYA+QQFRCY++GRE+TL+TDHK+L+ LK  KN +GRRARW++TLMEF  Y TQ
Sbjct:  163 SKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFM-YNTQ 498          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK)

HSP 1 Score: 474 bits (1220), Expect = 7.100e-164
Identity = 223/298 (74.83%), Postives = 257/298 (86.24%), Query Frame = 1
Query:    1 AKFPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGRE 894
            AKFPLPT REMFDQL G++YF S+DMLWAYWS+PLRD DKHKTAFT+RNKKY +  MCFGLTNA ATFSHLVNKVFQG  +DFALCFLDDVL ++G +FS HL+ LE+IF RMI ANLKFKLPKCLFGA+QVP+LGHI TREGLKPDPKKIEA+K ++RP +KKQVRQ LGLASYYRQFV  F+  A PLY LTK+ PKGVEWTDDCEW++Q LKD L + PILI+P F++ F +ETDAS  GLGA+L ++T  GRKPVAYASRVC+S EANYSATELECLGVI+ +QQFRCYILGR+
Sbjct:   25 AKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLFGAAQVPFLGHIATREGLKPDPKKIEAIKKLQRPQTKKQVRQVLGLASYYRQFVPNFAATAAPLYTLTKKEPKGVEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILGRQ 322          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A1B6LP54_9HEMI (RNA-directed DNA polymerase n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6LP54_9HEMI)

HSP 1 Score: 309 bits (791), Expect = 4.690e-91
Identity = 178/501 (35.53%), Postives = 268/501 (53.49%), Query Frame = 1
Query:    4 KFPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYC----WKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAKD---------IAKEQEKDSFCGSI------------MTYLFQ-----MVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHKDPG 1416
             +P+P IRE  D+L GS YF S+DM   ++ I +    + KTAFT+ +  Y     +  M  GL N+ +TF  L++    G      L +LDD L + G     H+ +L+ I +R    NL  KL KC F A ++ +LGH++ +EG++P  KK+EA+    RP S ++VR FLGL+ YYR  ++ F++IAKPL QLTK   +   WTD+CE ++++LK+KL+S PIL+YP F +PF++ TDAS  GLGA+L    +    P+ YASR  +S+E NYSATELE L VI+AV+ FRCY+ G  +TL+TDH A++ L   K+S+ R  RW + L +++  +     K                            N +N D+   +R  L+ +K+         + +EQ  D  C  +            + Y  Q     ++VP   +  IL   H      H G  K LK + + + W NM  D+ NY++EC  C + +D G
Sbjct:  308 NYPIPDIRETLDKLGGSKYFSSIDMNQGFYQIEVDPGSREKTAFTVPDGDYVGTYEYLRMPMGLRNSPSTFQRLMDMTLAGLRGKTCLIYLDDCLIY-GTNIDDHINDLKDILQRFRDVNLSVKLQKCKFAAEEIEYLGHMLNKEGVRPLKKKVEAIHNYPRPQSVREVRGFLGLSGYYRTHIKNFADIAKPLTQLTKGN-QSFNWTDECEQAFKSLKEKLMSEPILVYPDFSKPFLLSTDASSVGLGAILANVIDGQEHPICYASRQLNSSERNYSATELEMLAVIWAVKYFRCYLTGVHFTLVTDHSAIRWLLSLKDSTSRLTRWALKLQQYNYTVVHKPGK----------------------------NHLNADSL--SRAVLKVSKETLPVIDLDTLRQEQRIDGECQKLKAHKRYKTNPQGIIYYQQGSDKLILVPSKFRTKILHLHHNIPTAGHTGALKTLKRIKQRFVWPNMKEDVQNYVQECHSCNQRRDQG 776          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A224XIF4_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XIF4_9HEMI)

HSP 1 Score: 307 bits (786), Expect = 2.610e-90
Identity = 172/494 (34.82%), Postives = 261/494 (52.83%), Query Frame = 1
Query:    7 FPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGV--EWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAKDIAKEQEKDSFCGSIM-----------------------TYLFQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHKDP 1413
            +PLP I E  + L  S YF ++D    Y  IP+R  D+ KTAF+     + +  + FGL NA ATF  L++++      +    +LDD++  S      H   L K+  R+  ANLK ++ KC F   +V +LGH++T +G+KPDP+K+ AVKG R P + K+V+ FLGLA YYR+F+ GFS +AKPL  L +   KGV  +W  + + +++ L++ L S  +L+YP + +PF + TDAS   LGAVL ++ +   +P+AYASR  +  E NYSATE E L V++A  QFRCY+LGR +TLITDH ALQ +   K+ S R ++W + LME+   +      RP ++                         V    K      L   K+ AKEQ  D +C  +                        T   +++VP +L+A +L   H+  +  H G E+    + + + W N+  D+  Y+K C +C + K P
Sbjct:  231 YPLPLIVETLESLGNSQYFTTLDFACGYHQIPIRPEDREKTAFSTVGGHFEYNKLAFGLMNAPATFQRLMDQLLARMIGEECFIYLDDIIIFSAT-LEEHCTRLRKVLERIQGANLKLRMEKCHFAQKEVKYLGHLVTADGVKPDPEKVAAVKGYRVPCNSKEVKGFLGLAGYYRRFIAGFSNLAKPLTSLLR---KGVTFKWEKEQQKAFEVLREVLCSDTVLVYPDYSKPFTLATDASNVALGAVLAQKCDGEERPIAYASRQLNKAEQNYSATERELLAVVWATNQFRCYLLGRRFTLITDHAALQWMLRIKDPSARLSKWSLRLMEYDYEVIH----RPGKH------------HLNADALSRVVGAVGAKGK------LPDEKEFAKEQAHDQWCVEVARNSPRKVVRGSNGVLYWIPEGGKTGSEKIMVPASLRAPVLYMCHDTPWSGHPGVERTAARIKKWFHWPNLNSDVKIYVKHCQLCNERKSP 698          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A6H5G8Z4_9HEMI (RNA-directed DNA polymerase n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5G8Z4_9HEMI)

HSP 1 Score: 298 bits (763), Expect = 2.810e-89
Identity = 184/494 (37.25%), Postives = 271/494 (54.86%), Query Frame = 1
Query:    7 FPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDD-VLAH-SGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNR-----DTLQAAKDIAKEQEKDSFCGSIMT---YL--------------FQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHKDPG 1416
            FPLP ++E  DQ+AGS YF ++D+   Y  + +++ D  KT F   +  +C++ M FGL+NA ATF  +   + +   +  AL FLDD VL H S ++    L +L ++FR+   A+LK +L KC F   QV +LGHI++ EG++PD +K+EAV+    P S K VR F+GL SYYR+FV+ F+ IA PL  LTK+     +W  + + +++TLK++L S PIL YP F   FI+ TDASG G+GAVL +  +    PVAYASR  +  E NYSATELE L ++YAV  F  Y+ G  +T+ITDH AL++L   K+S+ R  RW + L E++   T  + K                              +N +A   +R     +TL + + IA+ Q +DSFC  +     Y                ++VVP +L+  +L   H    G H G  K  +A    Y+W  MA D+A++++ C  C   KD G
Sbjct:   60 FPLPRVQECLDQMAGSQYFTTLDLRSGYHQVKIKEEDIEKTGFATHDGVWCFERMPFGLSNAPATFQRMAASLVKSLGSRRALAFLDDLVLFHESWEQQLDELCDLLQLFRQ---ADLKLQLQKCHFLQKQVHYLGHIVSAEGIQPDDRKLEAVRNYPVPTSVKHVRAFVGLCSYYRRFVKSFASIAHPLTHLTKKDVH-FQWGSEQQLAFETLKERLTSPPILAYPDFTSSFILATDASGCGVGAVLSQLHDGKEHPVAYASRALNKAEMNYSATELELLAIVYAVNYFHQYLWGSHFTIITDHAALRYLHQMKDSNSRIMRWSLLLEEYA--YTPKYKK----------------------------GTINSNADGLSRAFAVVETLSSDQFIAQ-QAQDSFCNRVKNTPKYCNTGDGVLAKHTRQGLRIVVPSSLRLKVLALNHSTPQGGHCGHRKTYQAASSKYFWPGMAKDVASFVRRCPQCALVKDHG 518          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A1B6K8D1_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6K8D1_9HEMI)

HSP 1 Score: 297 bits (761), Expect = 1.860e-88
Identity = 170/498 (34.14%), Postives = 264/498 (53.01%), Query Frame = 1
Query:    7 FPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAKDIAK-----EQEKDSFC---------GSIMTYL--------------FQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHKDPG 1416
            FPLP I E  D L  S ++ ++DM   ++ + L + D+ KT F+     Y +  + FGL N+ ATF  L++    G N    LC+LDD++ +S      H + L  +  R+    L  +  KC F  ++V +LGHII  +G+  DP+KI +VK   RP + ++VR F+GL SYYR+ V+ FSEIA PL  LT++  K  EWT +CE +++TLK+KLV+ P+L YP F + FIV TDAS + + A+L +  +   +P+AY SRVC+  E+ YSATELE L +I A++ +RCY+ GR + +ITDH AL++L   K+ S R ARW + L E+   +T    K                              +NVDA  +    +++    ++     EQ+ DSFC         G +++Y+               ++VVP ++   +++  H   +  H G ++ L  + + Y+W  M  D+  YI  C  CQ  K  G
Sbjct:  153 FPLPNINETIDCLGHSNWYSTLDMESGFYQVSLNEEDRDKTGFSTTKGTYRYVNLPFGLNNSPATFQRLMSVELAGLNGSECLCYLDDIIVYSST-LEQHCERLAHVLERLREVRLFLQPKKCKFAHAEVKYLGHIIISQGVAGDPEKIISVKNFPRPKNVREVRSFIGLCSYYRRMVDKFSEIAIPLTSLTRKNVK-FEWTAECEQAFETLKEKLVTYPVLAYPDFSKEFIVATDASSKSIAAILSQVQDGVERPIAYWSRVCNPAESRYSATELEMLALISAIKHWRCYLYGRHFHVITDHAALKYLLSLKDPSSRLARWGLKLSEYQFSVTHKPGKAH----------------------------INVDALSRAVAGIKSIPFFSRNMLLNEQKTDSFCNGLLKQVEKGDVVSYVKDLDGLLYKKDGNTHKLVVPQSMIVKVIETHHTAPYACHQGVKRTLSYISDHYFWVGMQKDIEEYISRCESCQLRKRSG 620          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A2J7Q0T0_9NEOP (RNA-directed DNA polymerase n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q0T0_9NEOP)

HSP 1 Score: 297 bits (760), Expect = 4.130e-88
Identity = 170/467 (36.40%), Postives = 243/467 (52.03%), Query Frame = 1
Query:    7 FPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAKDIAKEQEKDSFCGSIMTYLFQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHK 1407
            +PLP I E+ DQL  S YF  +DM+  Y  I LR+ DK KTAF+ ++  + +K + FGL  A +TF  ++N V  G        FLDD++ ++ K  S H + L  +FRR+   NLK +  KC F  ++V +LGH+IT EG++PDPKK+E +   R+P S KQ++ FLG+ASYYR+F+  FS+IA PLY+L K+     EW D+ E ++  LK KL+S PIL YP F R F + TDAS +G+GAVL +       P+AYASR  +  E NYS +E E L +++ ++ FR Y+ GR++ + TDHK L  +   K+   R  RW I L E+   I                                            N D L     I  E E  S          Q  +   L+  IL   H+   G H G  K   A+   Y W NM  ++ +Y+++C  CQ +K
Sbjct:  351 YPLPDITEILDQLGKSKYFSCLDMVMGYHQIELREDDKEKTAFSTKSGHWAYKRLPFGLKTAPSTFQRMINNVLCGLTGTRCFVFLDDIVIYA-KSLSEHDEKLRDVFRRIRKYNLKLQPDKCEFLRTEVTYLGHVITEEGVRPDPKKVEVIDNFRQPTSTKQLKSFLGMASYYRKFISNFSKIATPLYKLLKKDAH-FEWLDEQENAFHRLKQKLISQPILQYPDFTREFTLTTDASNEGVGAVLSQGQIGKDLPIAYASRNLNKAEKNYSTSEKELLAIVWGIKHFRPYLYGRKFKVATDHKPLTWIMNIKDPGSRLLRWRIKLEEYDYEIIYKKG-----------------------------------TSNTNADALSRINGIVVENEGHS----------QSDINDELKRQILYEYHDAPLGGHRGMNKTYSAIKSVYSWPNMKQEIEDYVRKCKSCQINK 770          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: UPI001ED87E86 (uncharacterized protein LOC124166472 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87E86)

HSP 1 Score: 303 bits (777), Expect = 6.610e-88
Identity = 165/481 (34.30%), Postives = 261/481 (54.26%), Query Frame = 1
Query:    7 FPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVE--WTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAKDIAKEQEKDSFC----------GSIMTYLFQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHKDP 1413
            +PLP I++  D L G+ YF ++D+   YW I L   D+ K+AF+     Y +  M FGL NA +TF  L++ V  G   +  + +LDD++   G     HL+ L ++  R+  A LK    KC F  S V +LGHIIT +G++PDP+KI A+K    P + K +R FLGL  YYR+F+  F+ IA+PL ++T+   KGV   W+++    ++ L++ L   P+LI+P F  PF++ TDASG  +GAVL +    G + VAYASR  S  E NYS  E ECL V++AV+ FRCY+ GR +T++TDH+ L+ L   K+ + R  RW + L EF   +   H++  + +                         +  + +E++ D ++   +I K+   D F           G +     Q+VVP  ++  +L+  H   +  H+G  + L  ++  +WW+++  D+  + KECT C + KDP
Sbjct:  747 YPLPNIQDTLDSLGGAKYFSTLDLASGYWQIELDPKDREKSAFSTPGGHYEYTRMAFGLANAPSTFQRLMDTVLAGLKGERCMVYLDDIIVF-GCTIEEHLERLTEVLERLRGAGLKVNPHKCQFLKSSVEYLGHIITDKGVQPDPRKIIAIKEYPLPHNIKTLRGFLGLVGYYRRFIPDFARIARPLTEMTR---KGVAMAWSEEARGGFERLREALCRDPVLIFPDFREPFLLFTDASGAAIGAVLAQRGPAGEQVVAYASRKLSRPEMNYSTVEKECLAVVWAVKYFRCYLYGRRFTVVTDHRPLRWLLTLKDPTSRLIRWSLLLSEFEFEV---HHRAGKAHQNADALSRAYIGSAQPDYEPIWDRQLIKEEQERD-DDIRKVLEIVKQGTSDDFRIDGGGLLYRKGKLEGRSDQLVVPRGMKGRVLQAYHNSPWAGHMGIRRTLGGVMRNFWWKDVRKDVVRHCKECTSCTERKDP 1219          
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Match: A0A0P4VUG6_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhodnius neglectus TaxID=72488 RepID=A0A0P4VUG6_9HEMI)

HSP 1 Score: 291 bits (744), Expect = 7.150e-88
Identity = 168/493 (34.08%), Postives = 255/493 (51.72%), Query Frame = 1
Query:    7 FPLPTIREMFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFGLTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIFRRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRPASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWSWQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVAYASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQHLKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQXXXXXXXXXXXXXXXXXXXXANPVNVDAKEQNRDTLQAAKD---IAKEQEKDSFCGSIMTYL---------------------FQMVVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIKECTVCQKHKDP 1413
            +PLP I E  + L  S YF ++D+   Y  IP+   D  KTAF+     Y +K M FGL NA ATF  L++++      +    +LDDV+ +S      H + LE +  R+  ANLK  L KC F   +V +LGHI+  EGL PDP+K+ A++    P S + V+ FLGLA YYR+F++GFS +AKPL  L ++     +W +  + ++ +L++ L S  +LIYP F  PFI+ TDASG  +GAVL +  +   +PVAYASR  ++ E NYS TE E L V++A  QFRCY+LGR +TL+TDH AL+ +   K+ S R  RW + L EF   +      RP                             N DA  +    +  + +   +A  QE+D +C ++M                        ++++VP  ++  +L+  H  A+  H G  +    L + ++W  M   +  ++K C +CQ+ K P
Sbjct:   36 YPLPLIVETLEALGKSRYFSTLDLCSGYHQIPIWPGDCEKTAFSTMGGHYEYKRMAFGLVNAPATFQRLMDQLLAELKGEECFIYLDDVIIYSSS-IVEHCRRLEHVLARLGEANLKINLEKCHFAQPKVKYLGHIVASEGLCPDPEKVRAIRNYPVPDSVRAVKSFLGLAGYYRRFIKGFSTLAKPLTSLLRKNAL-FQWEEAQQTAFDSLRNALCSDAVLIYPDFADPFILATDASGVAIGAVLSQMRDGYERPVAYASRQLNAAERNYSTTERELLAVVWATAQFRCYLLGRRFTLVTDHSALKWMLRVKDPSARLTRWALRLSEFVYDVVH----RP------------------------GLKHTNADALSRAVCAIDGSSEESELAIAQERDDWCRTLMEERRAEKGENGLWYRVDRKGSRANWRVLVPAVMREKVLRQFHSTAWSGHPGPARTTSRLKKKFYWPQMGKQITEFVKACRICQERKSP 498          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig973.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XV63_HETAK2.470e-18953.79Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A7S3XVA0_HETAK1.440e-17570.62Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XU57_HETAK7.100e-16474.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1B6LP54_9HEMI4.690e-9135.53RNA-directed DNA polymerase n=1 Tax=Graphocephala ... [more]
A0A224XIF4_9HEMI2.610e-9034.82RNA-directed DNA polymerase (Fragment) n=1 Tax=Pan... [more]
A0A6H5G8Z4_9HEMI2.810e-8937.25RNA-directed DNA polymerase n=1 Tax=Nesidiocoris t... [more]
A0A1B6K8D1_9HEMI1.860e-8834.14RNA-directed DNA polymerase (Fragment) n=1 Tax=Gra... [more]
A0A2J7Q0T0_9NEOP4.130e-8836.40RNA-directed DNA polymerase n=1 Tax=Cryptotermes s... [more]
UPI001ED87E866.610e-8834.30uncharacterized protein LOC124166472 n=1 Tax=Ischn... [more]
A0A0P4VUG6_9HEMI7.150e-8834.08RNA-directed DNA polymerase (Fragment) n=1 Tax=Rho... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig973contigH-akashiwo_Contig973:45314..46961 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7668.SPU_013847-tr
PFAMsRVT_1,SCAN,gag-asp_proteas,rve,zf-CCHC,zf-H2C2
Model size1416
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.22e-78
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F42@33154|Opisthokonta,3BA5H@33208|Metazoa,3CWAK@33213|Bilateria
DescriptionK02A2.6-like
Cds size1386
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388064.229168-UTR-H-akashiwo_Contig973:45313..453431681388064.229168-UTR-H-akashiwo_Contig973:45313..45343Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig973 45314..45343 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388064.240617-CDS-H-akashiwo_Contig973:45343..463231681388064.240617-CDS-H-akashiwo_Contig973:45343..46323Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig973 45344..46323 +
1681388064.2507434-CDS-H-akashiwo_Contig973:46426..466361681388064.2507434-CDS-H-akashiwo_Contig973:46426..46636Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig973 46427..46636 +
1681388064.2721803-CDS-H-akashiwo_Contig973:46765..469611681388064.2721803-CDS-H-akashiwo_Contig973:46765..46961Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig973 46766..46961 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig973.2.1prot_H-akashiwo_Contig973.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig973 45344..46961 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig973.2.1

>prot_H-akashiwo_Contig973.2.1 ID=prot_H-akashiwo_Contig973.2.1|Name=mRNA_H-akashiwo_Contig973.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=462bp
MFDQLAGSWYFLSMDMLWAYWSIPLRDTDKHKTAFTLRNKKYCWKAMCFG
LTNAAATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLQNLEKIF
RRMIAANLKFKLPKCLFGASQVPWLGHIITREGLKPDPKKIEAVKGMRRP
ASKKQVRQFLGLASYYRQFVEGFSEIAKPLYQLTKEIPKGVEWTDDCEWS
WQTLKDKLVSTPILIYPRFDRPFIVETDASGQGLGAVLPRETEHGRKPVA
YASRVCSSTEANYSATELECLGVIYAVQQFRCYILGREWTLITDHKALQH
LKMTKNSSGRRARWIITLMEFSPYITQGHNKRPREYGQDKRPREYMGITE
DSENMSITANPVNVDAKEQNRDTLQAAKDIAKEQEKDSFCGSIMTYLFQM
VVPYTLQASILKWAHEGAFGAHIGREKALKALLEGYWWRNMAGDLANYIK
ECTVCQKHKDPG
back to top

mRNA from alignment at H-akashiwo_Contig973:45314..46961+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig973.2.1 ID=mRNA_H-akashiwo_Contig973.2.1|Name=mRNA_H-akashiwo_Contig973.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1648bp|location=Sequence derived from alignment at H-akashiwo_Contig973:45314..46961+ (Heterosigma akashiwo CCMP452)
GCGAAATTTCCCTTGCCTACAATAAGAGAAATGTTTGACCAATTAGCAGG CAGTTGGTACTTCTTGAGCATGGATATGCTATGGGCATATTGGAGCATAC CACTCAGAGACACAGACAAACACAAAACAGCATTCACACTAAGGAACAAG AAATATTGTTGGAAGGCGATGTGTTTTGGACTTACAAACGCAGCAGCGAC ATTTTCACACTTGGTGAACAAGGTGTTCCAAGGATACAACAACGACTTTG CATTATGTTTCCTGGACGACGTGTTAGCTCACTCAGGAAAGGAATTCAGT ACACACTTACAGAACTTGGAAAAGATTTTCAGGAGGATGATAGCAGCTAA CCTAAAGTTCAAGCTGCCAAAATGTTTGTTTGGGGCTTCTCAAGTACCAT GGCTGGGACATATCATCACAAGAGAAGGATTGAAACCTGATCCCAAGAAG ATAGAGGCAGTGAAAGGAATGAGAAGACCTGCATCGAAAAAACAAGTTAG ACAATTTCTAGGGTTGGCATCCTACTACAGACAGTTTGTAGAGGGATTTT CAGAAATTGCTAAACCACTATACCAATTGACGAAGGAAATACCAAAAGGA GTAGAGTGGACGGACGACTGTGAATGGTCATGGCAGACACTAAAAGACAA ATTAGTGTCAACACCAATACTGATATACCCAAGGTTCGACAGACCCTTTA TAGTGGAAACAGATGCATCAGGACAAGGATTGGGAGCAGTACTACCACGA GAAACAGAACATGGAAGAAAACCAGTAGCATACGCCAGCAGAGTATGTAG CTCTACTGAAGCTAATTACAGTGCTACAGAGCTAGAATGCTTGGGAGTAA TATATGCAGTGCAACAATTCAGATGTTACATTCTGGGAAGAGAATGGACA TTAATCACTGACCACAAAGCTCTCCAACACCTCAAGATGACGAAGAACTC ATCAGGGAGACGGGCCAGATGGATTATAACATTGATGGAGTTTAGCCCAT ATATTACGCAGTACAGACAGCAGATGCAATATCAAGGTTGTTTCCTCCAC AGACCAAAAAGGACACAAACAACACGGTAGCTGCAATAACAAGGGAACAA GCGAGACACAAAGAGGACATAACAAGAGACCCAGGGAATATGGGCAGGAC AAGAGACCCAGGGAATATATGGGCATAACAGAAGACTCAGAGAACATGAG TATAACAGCGAACCCGGTTAATGTGGACGCAAAGGAACAAAACAGGGACA CACTACAAGCAGCAAAAGATATAGCGAAGGAACAGGAAAAAGACTCCTTC TGCGGATCTATCATGACATACCTGTTACAACCGCAAACAGAAACACATAT GAAAAAGGAAGCAGTTGAGCTAAGCAGACACATGGCAGTATACGAGGGTG TACTATGGCACATACATGACTATCAAGGGGAAGCCAGAAGAAAAGGAGCC AGATTTCAGATGGTAGTACCATACACACTACAAGCCTCAATACTAAAATG GGCCCATGAAGGAGCATTTGGAGCACACATTGGAAGAGAGAAGGCACTGA AAGCACTACTGGAAGGATATTGGTGGAGAAATATGGCAGGAGACTTAGCG AACTACATCAAGGAATGTACAGTGTGCCAAAAACACAAGGACCCAGGA
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig973:45314..46961+

>mRNA_H-akashiwo_Contig973.2.1 ID=mRNA_H-akashiwo_Contig973.2.1|Name=mRNA_H-akashiwo_Contig973.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1386bp|location=Sequence derived from alignment at H-akashiwo_Contig973:45314..46961+ (Heterosigma akashiwo CCMP452)
ATGTTTGACCAATTAGCAGGCAGTTGGTACTTCTTGAGCATGGATATGCT
ATGGGCATATTGGAGCATACCACTCAGAGACACAGACAAACACAAAACAG
CATTCACACTAAGGAACAAGAAATATTGTTGGAAGGCGATGTGTTTTGGA
CTTACAAACGCAGCAGCGACATTTTCACACTTGGTGAACAAGGTGTTCCA
AGGATACAACAACGACTTTGCATTATGTTTCCTGGACGACGTGTTAGCTC
ACTCAGGAAAGGAATTCAGTACACACTTACAGAACTTGGAAAAGATTTTC
AGGAGGATGATAGCAGCTAACCTAAAGTTCAAGCTGCCAAAATGTTTGTT
TGGGGCTTCTCAAGTACCATGGCTGGGACATATCATCACAAGAGAAGGAT
TGAAACCTGATCCCAAGAAGATAGAGGCAGTGAAAGGAATGAGAAGACCT
GCATCGAAAAAACAAGTTAGACAATTTCTAGGGTTGGCATCCTACTACAG
ACAGTTTGTAGAGGGATTTTCAGAAATTGCTAAACCACTATACCAATTGA
CGAAGGAAATACCAAAAGGAGTAGAGTGGACGGACGACTGTGAATGGTCA
TGGCAGACACTAAAAGACAAATTAGTGTCAACACCAATACTGATATACCC
AAGGTTCGACAGACCCTTTATAGTGGAAACAGATGCATCAGGACAAGGAT
TGGGAGCAGTACTACCACGAGAAACAGAACATGGAAGAAAACCAGTAGCA
TACGCCAGCAGAGTATGTAGCTCTACTGAAGCTAATTACAGTGCTACAGA
GCTAGAATGCTTGGGAGTAATATATGCAGTGCAACAATTCAGATGTTACA
TTCTGGGAAGAGAATGGACATTAATCACTGACCACAAAGCTCTCCAACAC
CTCAAGATGACGAAGAACTCATCAGGGAGACGGGCCAGATGGATTATAAC
ATTGATGGAGTTTAGCCCATATATTACGCAAGGACATAACAAGAGACCCA
GGGAATATGGGCAGGACAAGAGACCCAGGGAATATATGGGCATAACAGAA
GACTCAGAGAACATGAGTATAACAGCGAACCCGGTTAATGTGGACGCAAA
GGAACAAAACAGGGACACACTACAAGCAGCAAAAGATATAGCGAAGGAAC
AGGAAAAAGACTCCTTCTGCGGATCTATCATGACATACCTATTTCAGATG
GTAGTACCATACACACTACAAGCCTCAATACTAAAATGGGCCCATGAAGG
AGCATTTGGAGCACACATTGGAAGAGAGAAGGCACTGAAAGCACTACTGG
AAGGATATTGGTGGAGAAATATGGCAGGAGACTTAGCGAACTACATCAAG
GAATGTACAGTGTGCCAAAAACACAAGGACCCAGGA
back to top