mRNA_H-akashiwo_Contig972.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: A0A401QI04_SCYTO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI04_SCYTO) HSP 1 Score: 81.3 bits (199), Expect = 1.140e-15 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDG--SFTIPRST 276 +++++ +EE+ + + T+ W R+ DDT++IW ++ +EFL LN IHP IK+ E+NGQ+PFLDVLV RN +G S T+ R T Sbjct: 286 ANLYLSSFEEEAI---NSSTLKPTHWYRYIDDTFVIWPHGRQKLEEFLGHLNSIHPNIKFTMEIEENGQIPFLDVLVKRNAEGTLSHTVYRKT 375
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI0010FBB0A7 (uncharacterized protein LOC114944459 n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FBB0A7) HSP 1 Score: 77.0 bits (188), Expect = 2.190e-15 Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSF 258 ++IFME +E KV L + + + W R+ DDT++IW +E F +FL+ LN H I++ E+N QLPFLDVLV +N+DG+ Sbjct: 10 ANIFMEHFENKV---LKNALLKPSTWFRYVDDTFVIWNHGKETFPQFLDFLNYQHRSIQFIMEIEQNNQLPFLDVLVKKNDDGTL 91
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI001ED886C9 (uncharacterized protein LOC124164935 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED886C9) HSP 1 Score: 78.2 bits (191), Expect = 1.240e-14 Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFT 261 ++ FMED+EE+ LS + + R+ DDT+++W QE FL+ +N +HP I++ EK+G LPFLDVL+ R EDGS + Sbjct: 194 ANFFMEDFEERA---LSTAKIKPKYYFRYVDDTFIVWPHGQETLPAFLQHMNSLHPNIQFTMEMEKDGCLPFLDVLIRRKEDGSLS 276
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI0005F52B34 (uncharacterized protein LOC105562568 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F52B34) HSP 1 Score: 75.9 bits (185), Expect = 1.390e-14 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSF 258 ++IFME ++ +++ K + + W R+ DDT++IW +E +FL +N HP I++ E+N Q+PFLDVLV RNEDG+ Sbjct: 10 ANIFMEHFKNEILKK---APLKPSTWFRYVDDTFVIWNHGRETLPQFLTFINSQHPNIQFTIEIEQNSQIPFLDVLVCRNEDGTL 91
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: A0A6P7H742_DIAVI (uncharacterized protein LOC114347923 n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7H742_DIAVI) HSP 1 Score: 73.6 bits (179), Expect = 1.400e-14 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFTIPRSTGNPHT 291 +DI+ME +E I LS + WLR+ DDT++IW ++ D FL LNGIHP I++ E LPFLDVL+ + SF+ HT Sbjct: 26 ADIYMEHFE---TIALSSSNLKPTCWLRYVDDTFVIWPHGKDTLDLFLSHLNGIHPSIQFAMEVESEESLPFLDVLIQKQPPYSFSYSVYRKPTHT 118
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: A0A8K0G947_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0G947_9COLE) HSP 1 Score: 75.5 bits (184), Expect = 1.950e-14 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGS 255 +++FMED E + + S + WLR+ DDT++IW +E D FL+ LN IH KIK+ E N QLPFLDVLV + +D S Sbjct: 132 ANLFMEDLETRALQTASHKPKL---WLRYVDDTFVIWTHGREQLDGFLDHLNSIHQKIKFTMKTEDNNQLPFLDVLVKKRQDES 212
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI000738448A (uncharacterized protein LOC107046828 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI000738448A) HSP 1 Score: 76.3 bits (186), Expect = 2.570e-14 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSF 258 ++IFME +E + ++ + W R+ DDT++IW + ++FLE LN HP IK+ E+NG LPFLDVLV RN+DG+ Sbjct: 115 ANIFMEHFENDTLKSVAQKPAV---WFRYVDDTFVIWPHGRTGLNQFLEFLNAQHPSIKFTMEIEQNGCLPFLDVLVYRNKDGTL 196
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI00193D6260 (uncharacterized protein LOC105202200 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193D6260) HSP 1 Score: 76.6 bits (187), Expect = 2.750e-14 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSF 258 ++IFME E+K+ L + + + W R+ DDT++IW +E F FL LN HP IK+ E+ Q+PFLDVLV RN DG+ Sbjct: 155 ANIFMEHLEDKI---LKNAPLKPSTWFRYVDDTFVIWSHGKETFSPFLAFLNAQHPNIKFTMEVEQENQIPFLDVLVRRNGDGTL 236
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI001ED8AFF1 (uncharacterized protein LOC124153280 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8AFF1) HSP 1 Score: 76.6 bits (187), Expect = 2.790e-14 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSFT 261 ++ FMED+EE+ LS + + R+ DDT+++W QE FL+ +N +HP I+ EK+G LPFLDVL+ R EDGS + Sbjct: 67 ANFFMEDFEERA---LSTAKIKPKYYFRYVDDTFIVWPHGQETLPAFLQHMNSLHPNIQVTMEMEKDGCLPFLDVLIRRKEDGSLS 149
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Match: UPI00192FAC3A (uncharacterized protein LOC120310339 n=3 Tax=Crotalus tigris TaxID=88082 RepID=UPI00192FAC3A) HSP 1 Score: 74.7 bits (182), Expect = 3.400e-14 Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 4 SDIFMEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIHPKIKWEAVFEKNGQLPFLDVLVVRNEDGSF 258 ++++ME +E + + K + WLR+ DDT++IW +E D FL LN +HPKI++ E N QLPFLDVLV + +GS Sbjct: 10 ANLYMEHFETQALEKSDHKPKL---WLRYVDDTFIIWPHGKEKLDNFLTHLNSLHPKIQFTMETEANNQLPFLDVLVYKKSNGSL 91 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig972.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig972.5.1 >prot_H-akashiwo_Contig972.5.1 ID=prot_H-akashiwo_Contig972.5.1|Name=mRNA_H-akashiwo_Contig972.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=105bp MEDYEEKVVIKLSDGTVIRADWLRFRDDTWMIWEQSQELFDEFLEKLNGIback to top mRNA from alignment at H-akashiwo_Contig972:89113..89442+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig972.5.1 ID=mRNA_H-akashiwo_Contig972.5.1|Name=mRNA_H-akashiwo_Contig972.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=330bp|location=Sequence derived from alignment at H-akashiwo_Contig972:89113..89442+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig972:89113..89442+ >mRNA_H-akashiwo_Contig972.5.1 ID=mRNA_H-akashiwo_Contig972.5.1|Name=mRNA_H-akashiwo_Contig972.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=315bp|location=Sequence derived from alignment at H-akashiwo_Contig972:89113..89442+ (Heterosigma akashiwo CCMP452)back to top |