mRNA_H-akashiwo_Contig97.18.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig97.18.1
Unique NamemRNA_H-akashiwo_Contig97.18.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A7S1BI86_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI86_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 9.450e-133
Identity = 201/289 (69.55%), Postives = 246/289 (85.12%), Query Frame = 1
Query:   94 EVTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGGN 960
            EV++A+IKELRE TG GMMDCKKALI A G +E A  ALRK+GLAKADKKASR+AAEGK+ AA SG R+V++EVNCETDFVAKD+GFL +C +VA AAL +  E+V+ALM +++EG+++E TR ALV+KIGENI+VRRV  +GS+ T SG+YVHMG IGVLVELEGGSEEVA+++AMHVAA++P YAT + VPA D+EKER ILTAQV DSGKPA+I+ KMV+GRL KYL+E CL SQ +VK +D TV + L +N AK+LGFKRI VGEGIEKK+DDFAAEVA+MAGGN
Sbjct:   42 EVSIAMIKELREETGAGMMDCKKALITADGSVEEATAALRKAGLAKADKKASRVAAEGKVVAASSGGRSVVIEVNCETDFVAKDSGFLGFCEKVAGAALAIDGENVDALMSSDLEGQSVEDTRAALVSKIGENIQVRRVVEIGSSSTTSGAYVHMGKIGVLVELEGGSEEVAQNVAMHVAAMDPLYATKEDVPAEDLEKERAILTAQVEDSGKPANIIEKMVEGRLRKYLEEKCLVSQTYVKTNDKTVEEYLSQNDAKMLGFKRITVGEGIEKKTDDFAAEVAAMAGGN 330          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A7S2UUL6_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUL6_9STRA)

HSP 1 Score: 385 bits (990), Expect = 2.720e-131
Identity = 204/287 (71.08%), Postives = 240/287 (83.62%), Query Frame = 1
Query:   97 VTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            VT A+IKELRE TGVGMMDCKKAL+E  GD+E A + LRK+GLAKADKKASR+AAEGKI +A +G +AVLVEVNCETDFVAKDAGF  +  +VA AAL    E VE +M  EV+GETLEATR+A+V KIGENI+VRRVAA+GS G+ S SYVHM  IGVLVELEGG +E+A DIAMHVAA+NP+YAT + VPA  +EKER ILTAQVA+SGKP +I+ KMV+GRL KYL+EICL SQ FVK +D TVG+LL++ GA + GFKR+ VGEGIEKKSDDFAAEVA+MAGG
Sbjct:   39 VTTAMIKELREATGVGMMDCKKALMETEGDVELATENLRKAGLAKADKKASRVAAEGKIVSASAGGKAVLVEVNCETDFVAKDAGFAAFADKVAQAALESGEESVEKVMAIEVDGETLEATRSAMVAKIGENIQVRRVAAVGSEGSTSASYVHMKKIGVLVELEGGDDELASDIAMHVAAMNPAYATKEDVPAEYLEKERSILTAQVAESGKPPEIIEKMVEGRLRKYLEEICLVSQTFVKTNDKTVGELLKQKGATMKGFKRVAVGEGIEKKSDDFAAEVAAMAGG 325          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A6V2NHG2_9STRA (Elongation factor Ts, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NHG2_9STRA)

HSP 1 Score: 374 bits (959), Expect = 1.430e-126
Identity = 198/287 (68.99%), Postives = 231/287 (80.49%), Query Frame = 1
Query:   97 VTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            VT A IKELR+ TG GMMDCKKALIE  GD++AAN+ LRKSGL KADKKA+R AAEGKI  A S  ++V+VEVNCETDFVAKD GFL +   VA AA    SEDV  +MG+  + ++LEATR ALV KIGENI+VRRVA MGSA TV G YVH G IGVLVELEGG+ ++A D+AMHVAA+NP YATA+ VPA D+EKE+ IL AQVA+SGKP +I+ KMV+GRL KYL+EICL SQ +VK  D TVG+ LE+NGAK++GFKRI VGEGIEKK DDFAAEVA MAGG
Sbjct:   39 VTTAQIKELRDATGAGMMDCKKALIETDGDVDAANEWLRKSGLVKADKKAARTAAEGKIIVATSEGKSVMVEVNCETDFVAKDDGFLGFANTVAQAAAAAESEDVATIMGSPDDNDSLEATRQALVAKIGENIQVRRVAGMGSADTVVGDYVHFGKIGVLVELEGGTPQLATDVAMHVAAMNPPYATAEQVPADDLEKEKSILAAQVAESGKPPEIIEKMVEGRLRKYLEEICLVSQTYVKTGDKTVGKYLEENGAKMIGFKRIEVGEGIEKKVDDFAAEVAKMAGG 325          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A7R9W1E4_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W1E4_9STRA)

HSP 1 Score: 373 bits (958), Expect = 1.970e-126
Identity = 203/288 (70.49%), Postives = 234/288 (81.25%), Query Frame = 1
Query:   94 EVTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGD-RAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAG 954
            +V+VA IKELRE TG GMMDCKKALIE  GD EAA D LR+ GLAKADKKASR+AAEGKI  A   D +AVLVEVNCETDFVAKD  FL +   VANAAL  S++D+E LM +EV+G++LEATR ALV KIGENI+VRR+A+ G +GT  GSYVHM  IGV+VEL+GG EE+A D+AMHVAA+NP YAT D VPA DIEKER IL AQVADSGKP +IV KMV+GRL KYL+EICL SQ FVK +D TVG+LL++NGA + GF R+ VGEGIEKK DDFAAEVA MAG
Sbjct:   39 DVSVASIKELREATGAGMMDCKKALIENDGDAEAAQDWLREKGLAKADKKASRVAAEGKIVTAKGDDGKAVLVEVNCETDFVAKDDSFLSFSETVANAAL--SADDMEGLMASEVDGDSLEATRQALVAKIGENIQVRRMASRGGSGTTVGSYVHMNKIGVMVELDGGDEELATDVAMHVAAMNPPYATPDDVPADDIEKERSILKAQVADSGKPPEIVEKMVEGRLRKYLEEICLVSQTFVKTNDKTVGELLKQNGATMKGFSRVAVGEGIEKKEDDFAAEVAKMAG 324          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A7S3P4E6_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4E6_9STRA)

HSP 1 Score: 368 bits (944), Expect = 6.580e-124
Identity = 199/288 (69.10%), Postives = 226/288 (78.47%), Query Frame = 1
Query:   94 EVTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            EVT A+IKELRE TG GMMDCKKAL+E  GD+E A   LR+ GLAKADKKA+R+AAEG+IA      +AV+VEVNCETDFVAKD  FL Y  +VA AAL + S+DVEALM T+   ETLE  R ALV KIGENI+VRRVA+ GS  T  G+YVHM  IGVLVELEGG E +A D+AMHVAA+NP YAT D VPA D+EKER IL AQVADSGKP +IV KMV+GRL KYL+EICL SQ FVK +D TVG+LLE  GAK++GF RI VGEGIEKKSDDFAAEV  MA G
Sbjct:   64 EVTTAMIKELREATGAGMMDCKKALLENDGDMEEATSFLREKGLAKADKKATRVAAEGRIALGTGDKKAVVVEVNCETDFVAKDGTFLAYSDKVAKAALDLDSDDVEALMATKDGKETLEEERQALVAKIGENIQVRRVASRGSGSTTVGAYVHMNKIGVLVELEGGDEALATDVAMHVAAMNPPYATKDDVPAEDLEKERAILAAQVADSGKPPEIVEKMVEGRLRKYLEEICLVSQTFVKTNDQTVGKLLESKGAKMVGFTRIAVGEGIEKKSDDFAAEVEKMAAG 351          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A448ZT08_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT08_9STRA)

HSP 1 Score: 365 bits (937), Expect = 3.130e-123
Identity = 194/290 (66.90%), Postives = 229/290 (78.97%), Query Frame = 1
Query:   88 GGEVTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            GGE+T   IK LR++TG GMMDCKKAL EA GD +AA + LRK GLA+ADKKASR+AAEGKIA + S  +AV+VEVNCETDFV KDA FL YC RVA AA G  S  ++ LM  EV+GE+LEATR ALV+KIGENI+VRR+ + G   T  G YVHMGTIGVLVELEGGSEE+  DIAMHV A+NP YAT+D VP+  ++ E+ ILT Q  +SGKP  IV KMV+GR+ K+L+E CL SQ FVKDSD+TV QLL+KN AK++GF R+VVGEGIEKK DDFAAEVASMA G
Sbjct:   37 GGEITPKTIKALRDLTGAGMMDCKKALTEADGDQDAAAEFLRKKGLAQADKKASRVAAEGKIAISSSDGKAVMVEVNCETDFVGKDATFLAYCDRVAGAAAGAESGSIDDLMNQEVDGESLEATRQALVSKIGENIQVRRLESRGEGSTTVGGYVHMGTIGVLVELEGGSEELCTDIAMHVTAMNPPYATSDDVPSDVLDNEKRILTEQALESGKPEAIVEKMVEGRIRKFLEEKCLVSQSFVKDSDMTVQQLLDKNDAKMVGFSRLVVGEGIEKKVDDFAAEVASMAAG 326          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: EFTS1_THAPS (Elongation factor Ts 1, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=EFTS1_THAPS)

HSP 1 Score: 365 bits (937), Expect = 9.290e-123
Identity = 199/288 (69.10%), Postives = 224/288 (77.78%), Query Frame = 1
Query:   94 EVTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            EVT ALIKELRE TG GMMDCKKAL E  GDIEAA D LRK GLAKADKKASRIAAEGKIA A +G + VLVEVNCETDFVAKD  F  +    A AA  +  + VEALM     G  LE  R  LV+KIGENI+VRRVA  GS  T +G+YVHM  IGVLVE+EGG+E +  D+AMHVAA+NP+YAT + VPAADIEKER  LTAQV DSGKPADIVAKMV+GRL K+L E CL SQ +VK +D TV +LLE+NGAK++GF RI VGEGIEKK DDFAAEVA+MAGG
Sbjct:   37 EVTTALIKELREATGAGMMDCKKALTEFDGDIEAAADELRKKGLAKADKKASRIAAEGKIAVASAGGKTVLVEVNCETDFVAKDESFAKFADEAAAAAAAMDGDSVEALMA--ANGNALEDARAGLVSKIGENIQVRRVATRGSGATTTGAYVHMNRIGVLVEIEGGTEALCTDVAMHVAAMNPAYATQEDVPAADIEKERAFLTAQVEDSGKPADIVAKMVEGRLQKFLAENCLVSQTYVKTNDRTVAKLLEENGAKMIGFTRIAVGEGIEKKVDDFAAEVAAMAGG 322          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A7S1E1H3_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1H3_9STRA)

HSP 1 Score: 359 bits (921), Expect = 1.830e-120
Identity = 195/317 (61.51%), Postives = 238/317 (75.08%), Query Frame = 1
Query:    7 APKAAAPAPXXXXXXXXXXXXXXXXXXGGEVTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            AP A APAP                  GGEV+V++IKELRE TG GMMDCKKALIE GGD EAA++ LRK GLA+ADKKA+R+AAEG+I+ A    +AV+VE+NCETDFVAKD  FL +   VANAAL V +ED +AL  T+++G T+E TR ALV+KIGENI+VRR    G + +  GSYVHM  IGVLVE+EGGS  +A+DIAMHVAA+NP +A  D VP   +EKER IL AQ  +SGKPA+IV KMV+GR+ KYL+EICL SQ +VK +D TVG+LLE+NGAK++GF RI VGEGIEKK D+FA EVA+MA G
Sbjct:   43 APAAEAPAPVAEEKPT-----------GGEVSVSMIKELREATGAGMMDCKKALIENGGDAEAASEYLRKKGLAQADKKAARVAAEGRISVASKDGKAVMVEINCETDFVAKDGSFLSFGDSVANAALDVGNEDTDALASTDIDGSTVEETRQALVSKIGENIQVRRFVGRGGSDSTVGSYVHMNRIGVLVEIEGGSTGLAEDIAMHVAAMNPPFAVPDEVPGDVLEKERNILKAQALESGKPAEIVDKMVEGRIRKYLEEICLVSQTYVKTNDKTVGKLLEENGAKMVGFTRIEVGEGIEKKEDNFAEEVAAMAAG 348          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: K0RU60_THAOC (Elongation factor Ts, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU60_THAOC)

HSP 1 Score: 357 bits (917), Expect = 2.680e-120
Identity = 189/287 (65.85%), Postives = 224/287 (78.05%), Query Frame = 1
Query:   97 VTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            VT ALIKELRE TG GMMDCKK L E  GDI+AA + LRK GLA+ADKKASR+AAEGKIA +    ++VLVEVNCETDFVAKD  F  +    A AA  + SEDVEALM   V+G +LE  R  LV+KIGENI+VRRV + GS  T +GSY+HM   GV+VE+EGG+EE+  D+AMHVAA+NP YAT D VP+ D+EKERE LT+QVADSGKPADI+ KMVDGRLNK+  E CL SQ +VK +D TVG+LLE+NGAK++GF RI VGEGIEKK D+FA EVA+MA G
Sbjct:   33 VTTALIKELREATGAGMMDCKKVLTEFDGDIDAAAEELRKKGLAQADKKASRVAAEGKIAMSKVDGKSVLVEVNCETDFVAKDESFSAFANSAAEAAAKLGSEDVEALMAASVDGGSLEDARAGLVSKIGENIQVRRVVSRGSGETTTGSYIHMQKFGVVVEIEGGTEELCTDVAMHVAAMNPPYATKDDVPSEDVEKEREFLTSQVADSGKPADIIQKMVDGRLNKWFSESCLVSQQYVKTNDRTVGKLLEENGAKMIGFTRIAVGEGIEKKEDNFAEEVAAMAAG 319          
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Match: A0A7S1ZYJ4_TRICV (Elongation factor Ts, mitochondrial n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYJ4_TRICV)

HSP 1 Score: 358 bits (919), Expect = 8.220e-120
Identity = 194/287 (67.60%), Postives = 223/287 (77.70%), Query Frame = 1
Query:   97 VTVALIKELREMTGVGMMDCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRAVLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETLEATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSEEVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVAKMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGEGIEKKSDDFAAEVASMAGG 957
            V VA IK LRE TG GMMDCKKALIE  GD EAA D LR+ GLA+ADKKASRIAAEG+IA A    ++VLVEVNCETDFVAKD  FL +   VA AA GV   DV   M   V+G TLE TR ALV KIGENI+VRR+   G  G+V G+YVHM  IGV+VELEGGSEE+A D+AMHVAA+NP YATAD VPA D+EKER IL+AQVA+SGKP +I+ KMV+GRL KYL+EICL SQ +VK +D TVG+LLE+NGA + GF R+ VGEGIEKK D+FA EVA MAGG
Sbjct:   87 VAVADIKALREATGAGMMDCKKALIENDGDAEAAQDWLREKGLAQADKKASRIAAEGRIAVASVDGKSVLVEVNCETDFVAKDDSFLGFAEAVAKAAAGVGGNDVLKAMSETVDGSTLEETRQALVAKIGENIQVRRMETRGGDGSVVGTYVHMNRIGVMVELEGGSEELATDVAMHVAAMNPEYATADDVPAEDLEKERAILSAQVAESGKPPEIIEKMVEGRLRKYLEEICLVSQTYVKTNDKTVGKLLEENGATMKGFSRVAVGEGIEKKEDNFAEEVAKMAGG 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig97.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1BI86_9STRA9.450e-13369.55Elongation factor Ts, mitochondrial n=1 Tax=Coreth... [more]
A0A7S2UUL6_9STRA2.720e-13171.08Elongation factor Ts, mitochondrial n=1 Tax=Fibroc... [more]
A0A6V2NHG2_9STRA1.430e-12668.99Elongation factor Ts, mitochondrial n=2 Tax=Ditylu... [more]
A0A7R9W1E4_9STRA1.970e-12670.49Elongation factor Ts, mitochondrial n=1 Tax=Pseudi... [more]
A0A7S3P4E6_9STRA6.580e-12469.10Elongation factor Ts, mitochondrial n=1 Tax=Amphor... [more]
A0A448ZT08_9STRA3.130e-12366.90Elongation factor Ts, mitochondrial n=1 Tax=Pseudo... [more]
EFTS1_THAPS9.290e-12369.10Elongation factor Ts 1, mitochondrial n=1 Tax=Thal... [more]
A0A7S1E1H3_9STRA1.830e-12061.51Elongation factor Ts, mitochondrial n=1 Tax=Thalas... [more]
K0RU60_THAOC2.680e-12065.85Elongation factor Ts, mitochondrial n=1 Tax=Thalas... [more]
A0A7S1ZYJ4_TRICV8.220e-12067.60Elongation factor Ts, mitochondrial n=1 Tax=Triere... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig97contigH-akashiwo_Contig97:1321744..1322709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog35128.Thaps2892
PFAMsEF_TS
Model size966
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0031974,GO:0032543,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0070125,GO:0071704,GO:0097159,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue1.52e-123
EggNOG OGsCOG0264@1|root,KOG1071@2759|Eukaryota,2XFT4@2836|Bacillariophyta
DescriptionAssociates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Cds size966
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388063.040944-CDS-H-akashiwo_Contig97:1321743..13227091681388063.040944-CDS-H-akashiwo_Contig97:1321743..1322709Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig97 1321744..1322709 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig97.18.1prot_H-akashiwo_Contig97.18.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig97 1321744..1322709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig97.18.1

>prot_H-akashiwo_Contig97.18.1 ID=prot_H-akashiwo_Contig97.18.1|Name=mRNA_H-akashiwo_Contig97.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=322bp
ARAPKAAAPAPAAAPAAAPAAAPAAAPAAGGEVTVALIKELREMTGVGMM
DCKKALIEAGGDIEAANDALRKSGLAKADKKASRIAAEGKIAAAVSGDRA
VLVEVNCETDFVAKDAGFLDYCARVANAALGVSSEDVEALMGTEVEGETL
EATRTALVTKIGENIKVRRVAAMGSAGTVSGSYVHMGTIGVLVELEGGSE
EVAKDIAMHVAALNPSYATADSVPAADIEKEREILTAQVADSGKPADIVA
KMVDGRLNKYLKEICLDSQPFVKDSDLTVGQLLEKNGAKILGFKRIVVGE
GIEKKSDDFAAEVASMAGGNL*
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mRNA from alignment at H-akashiwo_Contig97:1321744..1322709-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig97.18.1 ID=mRNA_H-akashiwo_Contig97.18.1|Name=mRNA_H-akashiwo_Contig97.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=966bp|location=Sequence derived from alignment at H-akashiwo_Contig97:1321744..1322709- (Heterosigma akashiwo CCMP452)
GCTCGTGCTCCTAAGGCTGCTGCACCTGCTCCTGCCGCTGCTCCTGCCGC TGCTCCTGCTGCTGCTCCTGCTGCTGCCCCCGCTGCCGGTGGTGAGGTGA CTGTTGCTTTGATCAAGGAGCTTCGCGAAATGACTGGTGTGGGTATGATG GACTGCAAGAAGGCCCTGATCGAGGCCGGGGGTGACATCGAAGCCGCCAA CGATGCTCTCCGTAAGTCAGGTCTCGCCAAGGCCGACAAGAAGGCCTCTC GCATCGCCGCAGAAGGCAAAATCGCCGCTGCCGTCTCCGGCGACCGCGCT GTGCTGGTGGAGGTGAACTGCGAGACCGACTTCGTGGCCAAGGACGCCGG CTTCCTGGACTACTGTGCCCGCGTGGCCAACGCCGCCCTGGGCGTGAGCA GCGAGGACGTGGAGGCCCTGATGGGCACCGAGGTGGAGGGCGAGACCCTG GAGGCCACCCGCACGGCACTGGTGACCAAGATTGGCGAGAACATCAAGGT GCGCCGCGTGGCCGCCATGGGCAGCGCGGGCACCGTGTCCGGCAGCTACG TGCACATGGGCACCATCGGCGTGCTCGTGGAGCTGGAGGGCGGCAGCGAG GAGGTGGCCAAGGACATCGCCATGCACGTGGCGGCCTTGAACCCCTCCTA CGCCACGGCCGACAGCGTGCCTGCCGCGGACATTGAAAAGGAGCGCGAGA TCCTGACCGCCCAGGTAGCGGACTCGGGGAAGCCCGCCGACATTGTCGCC AAAATGGTCGACGGCCGGTTGAATAAGTACCTGAAGGAGATCTGCCTGGA CAGCCAGCCCTTCGTGAAGGACTCCGATCTGACGGTGGGCCAGCTGCTGG AGAAGAACGGCGCCAAGATATTGGGGTTCAAGCGCATTGTGGTGGGCGAG GGCATTGAGAAGAAGTCGGACGACTTCGCTGCAGAGGTCGCCTCCATGGC CGGCGGCAACCTCTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig97:1321744..1322709-

>mRNA_H-akashiwo_Contig97.18.1 ID=mRNA_H-akashiwo_Contig97.18.1|Name=mRNA_H-akashiwo_Contig97.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=966bp|location=Sequence derived from alignment at H-akashiwo_Contig97:1321744..1322709- (Heterosigma akashiwo CCMP452)
GCTCGTGCTCCTAAGGCTGCTGCACCTGCTCCTGCCGCTGCTCCTGCCGC
TGCTCCTGCTGCTGCTCCTGCTGCTGCCCCCGCTGCCGGTGGTGAGGTGA
CTGTTGCTTTGATCAAGGAGCTTCGCGAAATGACTGGTGTGGGTATGATG
GACTGCAAGAAGGCCCTGATCGAGGCCGGGGGTGACATCGAAGCCGCCAA
CGATGCTCTCCGTAAGTCAGGTCTCGCCAAGGCCGACAAGAAGGCCTCTC
GCATCGCCGCAGAAGGCAAAATCGCCGCTGCCGTCTCCGGCGACCGCGCT
GTGCTGGTGGAGGTGAACTGCGAGACCGACTTCGTGGCCAAGGACGCCGG
CTTCCTGGACTACTGTGCCCGCGTGGCCAACGCCGCCCTGGGCGTGAGCA
GCGAGGACGTGGAGGCCCTGATGGGCACCGAGGTGGAGGGCGAGACCCTG
GAGGCCACCCGCACGGCACTGGTGACCAAGATTGGCGAGAACATCAAGGT
GCGCCGCGTGGCCGCCATGGGCAGCGCGGGCACCGTGTCCGGCAGCTACG
TGCACATGGGCACCATCGGCGTGCTCGTGGAGCTGGAGGGCGGCAGCGAG
GAGGTGGCCAAGGACATCGCCATGCACGTGGCGGCCTTGAACCCCTCCTA
CGCCACGGCCGACAGCGTGCCTGCCGCGGACATTGAAAAGGAGCGCGAGA
TCCTGACCGCCCAGGTAGCGGACTCGGGGAAGCCCGCCGACATTGTCGCC
AAAATGGTCGACGGCCGGTTGAATAAGTACCTGAAGGAGATCTGCCTGGA
CAGCCAGCCCTTCGTGAAGGACTCCGATCTGACGGTGGGCCAGCTGCTGG
AGAAGAACGGCGCCAAGATATTGGGGTTCAAGCGCATTGTGGTGGGCGAG
GGCATTGAGAAGAAGTCGGACGACTTCGCTGCAGAGGTCGCCTCCATGGC
CGGCGGCAACCTCTAA
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