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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 132 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 129 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681388053.41547-CDS-H-akashiwo_Contig945:36851..36904 | 1681388053.41547-CDS-H-akashiwo_Contig945:36851..36904 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig945 36852..36904 - |
| 1681388053.4266622-CDS-H-akashiwo_Contig945:44452..44528 | 1681388053.4266622-CDS-H-akashiwo_Contig945:44452..44528 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig945 44453..44528 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig945.3.1 >prot_H-akashiwo_Contig945.3.1 ID=prot_H-akashiwo_Contig945.3.1|Name=mRNA_H-akashiwo_Contig945.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=43bp
DLKHFDAVVPKIGHELRQKMPQLWSGVAEEISEEQKSETTEAA back to topmRNA from alignment at H-akashiwo_Contig945:36851..44528- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig945.3.1 ID=mRNA_H-akashiwo_Contig945.3.1|Name=mRNA_H-akashiwo_Contig945.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7678bp|location=Sequence derived from alignment at H-akashiwo_Contig945:36851..44528- (Heterosigma akashiwo CCMP452)
GATCTGAAGCATTTTGATGCTGTGGTGCCCAAGATTGGACATGAACTGCG
CCAAAAGATGCCACAGTTGTGGTCAGGTGTGAAAAACTTATTTTGGGGGG
GGGACTTGGGCATTCAGCAAAGGCAGGCGGGGAGGTAAAGAGCAGTGAAC
TGCTACTACTGCTAGCTTTGATGGTACATGTTGTTATATCGTATTCTCAC
ATGACAACTTTTATGTAGTGTAAAGCATATCCAGGCCTCGGCCTAAGAGT
ACGGAGGTACGGAAATCCGTACATATTCAGCCACAATCGTGCATTTTTCC
GTACGCTCCAACCAAGTAGTTCGTACATTGACCTGCTCCTGCTGACGGAG
AGGGGAATCAAGTTTGTTGAGGAAAAATCATTTTTGTCTTGGGCGATTTT
AATTTTTTCAGTTTAAAAATATTGTACAGCCAATCAAAGAATATCAGGAA
AGGTAAAGATTTTTCTAAGCCAATCAAAAAATAACTATACATTACTGCTG
CTGCTGCTTCTGCTGCTGCTGCTCAGATATATAATGACAGTAGTACTGTA
CCGTAGTAAATGAATATCGCACTACACTGTTGGTGCAGCAGTACTCGAAA
ATGAGCAAGTTCGAAACAACAATCATTCTTTCTCAAGCTGAAATCGGATG
CATCCCTCTCTTGCGGAGGAGCCTCGAAGCCCAATCCTCAAAGCGTCGAT
GGAAGACCTTTTTTTTTTGCATTTCGTACAGAATCGTACATCGTTCCGTA
CATCGAGGGCAAAATGGTGCATTTCGTACGGAACAAAAAAGCGTACGATC
GTACACCCCCAGATCCTTAGGCCGAGGCCTGCATATCTCTGAAGATGATA
TTCTGTCTCACAACAAGAAATGAAAGTGGGACTTGCTTTTAAGCAAAAGA
AATAAAAAATACCAACACAATCTAAACCATGTGGCAACAGAAAACGTGTG
GTGAGCAGAGTTGGGTTGGAGGAGTGTGTTTAAATTTAACCTAAACATGA
AAACCCAAAACCCAAATCAATACAAAACATACTGGTCAAACAGGAATACA
GCACATATAGAACTCTTACATTTCTGCGTTTCTCTGTAAAGTTTAGCAAA
AAAATGCAGTCAATTATTTACACCCAAAAATTGTGTTTTGGGGATTCATC
TATTGTTGTGTTTAATGACTTCCCAATTTATGAACAACTTATTTGTCCCT
CCGCCATTATAGCATGAGAGGCTCAGTGGAAGCCATGTGGTTGTCAGGCA
AGAAAGTCATGTTCATTACTGTTGTGTTTAATGTGATGATGACTTTGCTG
TATGAAACAACTCATTTGTCCCTTCACCATTAACACGAGAGGCTCCGTGG
AGGCCGTGTCAGTGTCAGGGCAAGCAAGATCTGTTCATCTATATTTTATT
TATAGTACACCGCACCCAAAAAAAAGGTCGCGAAACGACCCGAAATCGCA
CCTGTTTTGAAAAAGCCCATGCCCTTGACTTTTGCGGTGCCATAACTCTG
CGGATTCTCCATCAAATTTGACCCCGAATAGACCATTCTTTAAGTTTTTA
ATGGCATTTTCCCGCACTCATGCTCCGGTTTTGTCTCGTGATGAAAGAAG
AGTAAGATGAGTTTGGGAAAGTTTTCATAGCCTCTTGCCCATGCTCCCCC
TACTCTCCCTGATCATCCTTGTCCCTGCTTATCATTGAGCACGAGTGTAC
GACGAGTAGAGGCTGCGCTAAGGTTCCTGGTAGTAGGACAGAGACTGAAT
TAAATTTGAATTAAATTGGTGGTGGTACGAAGCAGAAAAGAGGAGTTTCA
ATATTTTCTGATTGGCGGATATCGCTGCGTCTTGGACGATATCCGCCAAT
CAGGAAAAACCAACTGTAACTTCTCCTTCTTCGCTGAACAACTTCTCCCT
CCGCTGTGACAACGTACCCCGGAGTGTATAAATTCAATTCATTGTGGTGG
TGGTAGAGAGGAATTGATCGTCCTGGAAATTTCACTTGAGAATATATTAT
TACGGTAATCCTCAGAACCACTCAGGGGTATTTCACCGAGGAACCCCCGA
AAGTAATCGCCCGCGCGGTGATTGATCACCGTCGGGATATCCTCGCTGAA
TTGAAAAATTGCCTGCGCGAACGAGAAATTATCTGCGCAGGGTGGTAGTA
TTTCAATATCTAAGAGGTATATATGTTTTGTGTGACCACAAATGTGTGGA
TTGTGCTCCCAGTGATGAAAACCACTCTTCTCTCTTAACATCCAACCCTT
TTTTTTTACAACCCAACTTAATCCAATGAAGCCTGTATCAACTCAGTCCT
CAAGCCTTTACCAGTGCGCCTTCATGTATGTGAATGGTAATACTTCGGGC
GTAAAGGTTCCAGGAAAAGTGAGAGCTCTAAAAGTTTGCAGAATCAGTAG
GGAAGAAAAACAGGTGGAAGAGCTGTTGTGCGGGATAGCCAATTGAGCTG
AAGGCTGTAAGTTGTGACTTGACACAACCCAAATTGATTATCCAGTGAAG
TTTACCAGCTCATTTGGCCCTGTACCATCAACAGGAATGGCTGGGTACAG
ACCCTGTTGCAAGGACACACCAGAGGTTCAACAACATGCAAGGCTTGCTC
ATCATACGCATCCAGCCAGATACCGTCAGGTGGTGGGCAATAAGAAGCCG
AGTAAAGTTCCAAGGACCAGCCAAACACGCACAGCATCTGATGGATGAAA
ATATGCACACTCTGTCTTTAGCTGGCAGGTGAAAAGACGCCGGAATCAGC
AGTGATACGCACATCGAGTGATCGGAACAGTGTGGATCTCCGGGTTGATA
ACATGTCATTCGTCTCCTACTGGACATGCAAACATCTGGAGAATGAAGAA
GAGGCGGCTTTGTGCTACTCTGTTCAGTGGAAGGCAATCGAAATCGTCAG
AAGTTACAAGATATTTTTGGTTGATGTTATACTGAGCAGTAGCAGCAGCA
GCACAAATGGTCGGTCGTCAGTTGCTTTTAAAATTAATATATTTTATTTT
AGCAGTTTCTTTAATTATTGGTTAAGTTGGAACTCTTTTGAAAATGATAT
TTAATTTCGGGGAAAAAGTCAAAATATATCAAATACAAAATTGATCTGAA
ATGTCGTGAAGAAATAATTTTTCTGTTTACAATGTTTAATCCTTTTTTAA
AAAAATATTCTTTAAAGCCCTGCATTGTGTGAATCTTTAAAGACAAGGAC
AGACAAAAGGCCAACATATGGAATGTGATTTTCAGTCTTTTCTAGCTTCA
GCTGGGTGCTCCTGCTGCTGGGTGGTGCTGCTGCTGATGCTGTATGCTGT
ATGCTAGATGATTGTGAAGTTGATGGAACACCCTGTCAGGTTTTCGAACC
GAGATAATAAAGTAAAAGCTCAAATAATTCATTTATTTTTAACCTAAAAT
AAATGATTGAAGTTTGATTTTTAACGCTGCATATATATGTGGGAGCTGGA
GAGGCGTATCATTTGCTAGAAGATTAATTAATTGTTCCGTACCATCAGTG
ATCACTTTCATTTCAAGCTGCATATATATGTATTTTTTAAACGCTAAGCT
TATAACAGCTGAGTCATTTTAGATGCGCTGGCGACAGTTGGATGATGAAT
GTTCAACACGAATAACGATTGGAAAAGTAATATTTGATCACAAGCATACA
CTTGATTGATCCAATTCTCCCATTTTCAATATACAGGGATCATGTTTGAA
ACATCGCCTTACTGATTTCAGAAAAAGTACTGAAGAGATAACAATGTTTC
CCGTAGACGAGACAATGCTACGTGTTTCCAATGTTTCCCGTAGACGAGAC
AATGCTACGTGAAAAGCCGGAATGGTATTTTTACTATCATGAGAAAAATA
TACATTAGAGATGTTGGTGGGAAATGGCGAAGGAGTATGCACAGCAGCAG
CAGGATATATGTCGATTAGGGTGAAATGAGATTCCGGCTATAAGTTTGGA
ATTCCGTTTTGGAGGTGGATAATTATGGATATTTTCAAAATGATGCCAGT
TTTCCTAATATTTATGATATACACTTCTTTTTCTTGCCTGTTCTGCTTCT
TCGAGCCGAGAAGAAGATATTCAATGCAGAAATTTTACCAAAGTCATGAT
TTCCCCGTAAAAAAACATTTTATCTTGAAGGGAAAATGGCCCTTTGTCTC
ACAATTCCAGAATAAACGAACTCGCCGAGGCATACACAGCTTTCCGATAC
CTGATGGTGGTAGAAGCCTCTACCCTTTGCCCGCGTCACCTACATCAATC
TATAGCAGAGTAGTCAAGGTCGGTCTTATACTATACCAAGGATCTACCAC
AATGAGGTTGCCCGAAGGATTTGACTATTACATTATATGTATGTAGCATG
TATGATGGCGGCTGTGCAGTGAAGTGTGTTAACCGTGTTGTAGCGGTGGG
CTGTAGGAGTAGCCAAGGTCACTCTTATAATGCCAAGGAATTGCTCCTAT
GAGTTGCAATAAGAATTTGGCTATTATGGCAGTGAAGTGTGTTGTAGCCG
TGCAGCAGTGTGGATGGCATTATTGTGTAAACAACATGAAGAAGAAGAAT
AAACAACGTCGTAGACCGAAAGAAGAAGAACAATAACAACAAATTAATCT
GCAACAGTTGTCCTTCCGCATGCACCAGCAGCAGCAACATCATCAAGCAC
CAGACATTAGGCGTCGCAGCGGGCCAGGGATGGAGGTAGCGATGGCTTGA
GGGCGGATTTTGTGGTGAGGGGTGTATTTTTTTATAGTGAGTTAAATTTA
AACAAAAGAACCTACTTTCATGTGCAGGTTTTGGTATATGATCGACGACA
TCTAATATGCGTGACTTTTTTCCAAATACTAGATCGATACAATACTCGTG
GAGTTGCAATAATAAGGGATCGATTGCGTAGCAGTAGTGAATGAAATGGA
TACGAAATCAAACATATCTTGGGTAATTCACATTCAACTGGTCCAACAAG
AAAAAGGGAAGTTTTTGAAAGGTCCATTCGGCCGCATTCGGAACACTTTC
ACAATCAAAAAATGATGTTCTTGGTCATACCACATTCCTTCACCTTGAAC
AACTTCAGACGATGGACAAAATGAATTTTCACCCATAACAAATACCAATG
TCGACAGGAGGAACAACGCTTTCTGACTGCGAAAGAAGATAATGCCCCTG
TTTTTTTATAATGAATGGCATTACACTTGATCATTGATTTGAACAGGGTA
TGGAGGGTTTCTGAGGACTTTAAGCGTTCGTTTTAGATGTATCATGACAT
GAATCAATGTAAAACTAAAAAGAACGGGCTCGATCGGTTAGAAACTGCTT
GCAATCCTTCATTTCATTTTATGAGCGAAACAGAGAAAGTAAGAACAGCT
TCAAGCTGGCTTTCCATGGCGTTTCATCCAGAGAAAATTGCAGAGGAGAT
ATTACATGTACCAATATTGAACATAGTTTGATTTGGCTCGGTTTCGTCAG
GTTTCAGTCTTGCTTTGCTCAGCTTTCCTGCAAGTCCAACTGCTTTCATT
TTATGGCAAGAAAGCAGCAGAGCTCCAGCTGCAGAGTATGTGCTACTTCT
AATTTGCAAGTAGTCTGTTTTTTTAAGATCGGGGTAAATTATACTGAAAA
AACAGCTTTTTATTGCTTTTCGCATCCTTAGAAAAACTTTATCAGGTCAA
AATATATTATTTATGTGGTGATGCCTAAAAATCTAAAACCTAAACCTAGT
TATCAGCTTTTGGTGATCTTTTAAAAGCTGCAAAATTGGAATTTATCAAA
CTTTTCGATCATATCTGAAACATACTGAAGTGATTTATTTAACAAAACGT
TCACAGCATATTTCAAGATAGCCGAGTTCATTTTGATCGAACTTTTCATT
TTTCAAATATTTTCATTATCATGAAGGCTTCGCTTGTTCGATTCTTGTGG
TGTTGCTCTATTGATTCCAATGGTTTGGTGGTTGTCCGTTCTACTGGTAG
GTGAGCTTGTTGAAGTTCCTTTTCATTTGAACATGAGTCTGATTGGGCGG
ATTTGACCGCGATGTTCGGTTTTGCCCCTTGACGTCAGTGGTATGAAACG
TATCATCTGCATTTTGGCACTCCAAACGTAAAACAACATTCAAAGGAAAA
CTGCACAACTTTTTCCTCTAGCAGTTTTAAAAATAAAAAATAAATCAGGT
ATTTTACTTTTTAAAATATAATTTGTGTCGGGATCAGTCCAATTTTTGGC
ATGGAAATGGTATGGATACGTTGACTACTAGTATTGAATCAACTCAATAA
AAAGCTAGTCTGAGCTGGATCAGCCAAGGATCAGACGCCGTTTCTGCGAG
AACTGCATGTGGCGCCTCGGTATTATTTGCTACAGTCCACCAGGGCCTTT
GGGCCCATGGCTGACCGAGGTATGGCGGCAATCCTATGTAGCGCCCAGAG
CTCTAAGGGTACAGGCAGGCCCTTGGCCCACCACCGTCATTCAATACTAG
AAGCTATCACGATTCAATAATACAATGTTTTATTGAAACGATTATAGTGG
TTTTTGGCATTTTCGGGTTTTCCGGGTTTTTATCAATACTACTACGAAAC
TATTTCAATAATGATCGCGTTTATTGAATCGATCTAAGTATTTGGAAAAT
CGGGGGTAAAAGTCACGCATATTAGATGTCGTCGATCATATATTATACCA
CAGGGACATCTGCATAGATGCAAGGCGTAAGTTGTTTTGTTTAAAATTAA
CTCCCTATATATGATTTGTATTGAAATGAAAGTGATCACTGATGGTACGG
AACAATTAATTAATCTTCTGGCAAATGATACGCTTCTCCAGCTCCCGACG
TTTCGACATGAAGTCATACCTCCTTCACAGAGTCACCAAGTTGGCCAAAC
TCCAATTAGGTCCCATCAAGGTAATGAAGGTGGTCCAGTAGCACAACAAC
ACCAATAGCCGATGAGACAAAAACGGTATAACGGTTACACCTCTCCTCTC
TCCTTCTTCTCCTCCTTCCATCCCTGCTGCCAACAGCACAAAACAGTAGT
AAAAGAAAAATAATGGAAATGCAAATTTACATAACGAGATTCGCACTCTC
CTCTTCCTCGCCCTCTTTGCCCGGCCCTTGCCACCCGACTGTCCCTCTTC
TTGTTCCAGACTGACAGAATAGCCTTCCTCGCCACCCCAGACTTTCAGCT
TCATCGCCCCGAGGAGCGCGCAGATCGCGCCCGGGTCTTCCTCGTCCGGA
TGCGAGATCCGACGCTTCTTCATCAGTCTGTCCCTCCTCCTGAGTCGTTG
CCTTTGGCTCCAAGAAACCCTCCCACCCTTGCCATCACCCACCTTCTTCT
TGCCAAACCTTCTTACCCATTTCTGGCGAGCCTTCACCCTTCTCTTGTAA
GTAATAATAATATTGGCAAATGTTCTCCTCCACTATGGCGAGAAGAAAAA
TAAAATTGCCTCTTTCAACTACTGAGAGGAGATCAACTGGTATACATGAT
GTTCAACGGGGGGGACTAGTTCTCACTGGTTCTGTTGTAAAATGTACTAT
GCATAGTATCAAGATTTATTATGAACGTAGTACAAACAAGCAAACAACAG
CTATTTGTAGTACAAGATGAAAACTGAATCCCTTCCAATCCACTTCTTCT
TTTTTCCTTCTTCAAAATGAACAGGAGTGGCCGAGGAGATTAGTGAGGAG
CAGAAGTCAGAGACAACAGAAGCGGCTT back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig945:36851..44528- >mRNA_H-akashiwo_Contig945.3.1 ID=mRNA_H-akashiwo_Contig945.3.1|Name=mRNA_H-akashiwo_Contig945.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=129bp|location=Sequence derived from alignment at H-akashiwo_Contig945:36851..44528- (Heterosigma akashiwo CCMP452)
GATCTGAAGCATTTTGATGCTGTGGTGCCCAAGATTGGACATGAACTGCG
CCAAAAGATGCCACAGTTGTGGTCAGGAGTGGCCGAGGAGATTAGTGAGG
AGCAGAAGTCAGAGACAACAGAAGCGGCT back to top
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