mRNA_H-akashiwo_Contig940.13.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 277 bits (708), Expect = 1.210e-85 Identity = 141/178 (79.21%), Postives = 155/178 (87.08%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHILPNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSSSHMSIKS 534 VSPRVLK CA QL LTRLFQK+GK+ EFP SWKVARVTPV+KK+DA+LP+NYRPISVLPTLATTFERVLM QL+SFL HI NQFGFLP TGT+DVGVIL D+I ALEARKDV LVALDF+GAFDKVWWRGLLAHLWAVGV SKA++L +SYLSDRALFVVANG S +SIKS Sbjct: 334 VSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKS 511
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 254 bits (648), Expect = 2.400e-78 Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHILPNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYL 471 VSPRVLK CA QL LTRLFQK+GK+ EFP SWKVARVTPVYKK+DASLP+NYRPISVLPTLATTFERVLM QL+SFL HI NQFGFLP TGT+DVGVIL D+I ALEARKDV LVALDF+GAFDKVWWRGLLAHLWAVGV SKA++L +SYL Sbjct: 334 VSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYL 490
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL) HSP 1 Score: 134 bits (337), Expect = 3.840e-33 Identity = 76/179 (42.46%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLF-GHILPN-QFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSSSHMSIK 531 VSPR+LKHCAR+L+ LT +F + ++P WK ARV PV+KK S P NYRPIS+L + E+++ + L H+L + QFGF PG T D+ +I++ ALE D +VALD GAFD+VW GL+ L A G+ L++ YL R L VV NG +S + I+ Sbjct: 388 VSPRLLKHCARELSAPLTTVFTSCLREKKWPSVWKEARVVPVHKKNSRSEPNNYRPISLLSVMGKLLEKIVAAAIYQHLSENHLLSDRQFGFRPGRSTADLLLIISKDWQDALEEGLDTLVVALDIAGAFDRVWHAGLVKKLCAKGIQGNLLALLEDYLQGRTLRVVINGQASQPLPIQ 566
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0FGX5_9NEOP (Reverse transcriptase (Fragment) n=25 Tax=Polyommatinae TaxID=42297 RepID=A0FGX5_9NEOP) HSP 1 Score: 120 bits (300), Expect = 4.600e-31 Identity = 70/178 (39.33%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIL--PNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSSSHMSI 528 + P VLK CA +LA +LTRLF+ SG P SWK A V P+ K+ D S P NYRPI++ + E ++ Q +L G L Q+GF G D+ LT R A+E++ + V+LD AFD+VW + LL+ L + G+P K K + S+L+DR++ VV +G+ S S+ Sbjct: 1 IPPIVLKKCAPELAPILTRLFRFSYSSGIVPASWKTALVHPIPKRGDRSNPSNYRPIAITSLFSKIMEYIINSQPLRYLDGQGLLSDKQYGFRKGRSAGDLLAYLTHRWAQAIESKGEALAVSLDIAKAFDRVWHKALLSKLPSYGLPEKLCKWVTSFLADRSIKVVVDGECSETQSV 178
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 122 bits (305), Expect = 6.400e-31 Identity = 62/66 (93.94%), Postives = 62/66 (93.94%), Query Frame = 1 Query: 337 ARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSSSHMSIKS 534 ARKDV LV LDFKGA DKVWWRGLLAHLWAVGV SKAFKLMQSYLSDRALFVVANGDSSSHMSIKS Sbjct: 1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKS 66
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: F2WZY0_9NEOP (Reverse transcriptase (Fragment) n=1 Tax=Pseudolucia collina TaxID=689551 RepID=F2WZY0_9NEOP) HSP 1 Score: 116 bits (290), Expect = 1.350e-29 Identity = 70/177 (39.55%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIL--PNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSSSHMS 525 + P VLK CA +LA +LTRLF+ G P SWK A V P+ KK D S P NYRPI++ + E ++ QL +L L Q+GF G D+ LT R A+E + + V+LD AFD+VW + LL+ L + G+P K K + S+L+DR++ VV +G+ S +S Sbjct: 1 IPPIVLKKCAPELAPVLTRLFRLSYSYGIVPTSWKTALVHPIPKKGDHSNPSNYRPIAITFLFSKIMESIINSQLLRYLDAQELLSDKQYGFRKGRSAGDLLAYLTHRWAQAIETKGEALAVSLDIAKAFDRVWHKALLSKLPSYGLPEKFCKGVTSFLTDRSMKVVIDGECSDTLS 177
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: F2WZY3_9NEOP (Reverse transcriptase (Fragment) n=1 Tax=Pseudolucia collina TaxID=689551 RepID=F2WZY3_9NEOP) HSP 1 Score: 115 bits (287), Expect = 3.700e-29 Identity = 68/171 (39.77%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIL--PNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGD 507 + P VLK CA +LA +LTRLF+ G P SWK A + P+ KK D S P NYRPI++ + E ++ QL +L L Q+GF G D+ LT R A+E + + V+LD AFD+VW + LL+ L A G+P K K + S+L+DR++ VV +G+ Sbjct: 1 IPPIVLKKCAPELAPVLTRLFRLSYSDGIVPTSWKTA-LHPISKKGDRSNPSNYRPIAITSLFSKIMESIINSQLLRYLDAQELLSDKQYGFRKGRSAGDLLAYLTHRWAQAIETKGEALAVSLDIAKAFDRVWHKALLSKLPAYGLPEKLCKWVTSFLTDRSIKVVRDGE 170
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 117 bits (293), Expect = 3.800e-28 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 1 Query: 358 VALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSSSHMSIKS 534 VALDFKGAFDKVWWRGLLAHLWAVGV SKAFKLMQSYLSDRALFVVANGDSSSHMSIKS Sbjct: 1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKS 59
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: UPI001E1D5DCD (uncharacterized protein LOC123531125 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5DCD) HSP 1 Score: 118 bits (295), Expect = 1.540e-27 Identity = 69/162 (42.59%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIL--PNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDR 480 VSPR L+ A LA L F + +S FP WK+A VTP++KK D SLP NYRPIS+L + ER + K + + L H L PNQ GF+ G T++ L + I AL+ K+V V D AFD+VW RG+L L +GV + + SYLS R Sbjct: 502 VSPRHLREGAPALAQPLATFFNTLLRSSNFPSQWKLANVTPIFKKSDPSLPSNYRPISLLSCIGKLMERCVHKHIYNHLIMHNLLTPNQSGFVKGDSTINQLSYLYNDICRALDEGKEVRAVFCDISKAFDRVWHRGVLYKLSRLGVRGSLLQWLSSYLSSR 663
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA) HSP 1 Score: 118 bits (295), Expect = 1.580e-27 Identity = 67/173 (38.73%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 1 VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIL--PNQFGFLPGTGTVDVGVILTDRIFLALEARKDVWLVALDFKGAFDKVWWRGLLAHLWAVGVPSKAFKLMQSYLSDRALFVVANGDSS 513 + RVLKH A +L+ L +LFQ + P+ WKVA V PV+KK P NYRPIS+L ++ E ++ K L + + L QFGF G T D +T + A + R++ L+ LD AFD+VW RGL+A L A+GV K ++YL+DR L +G +S Sbjct: 357 IPARVLKHAAPELSRPLAKLFQLLLNKHHMPKQWKVAHVIPVHKKNSKHDPNNYRPISLLCIISKVMEAIINKALWQHIDKNSLISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADRELKATISGKTS 529 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig940.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig940.13.1 >prot_H-akashiwo_Contig940.13.1 ID=prot_H-akashiwo_Contig940.13.1|Name=mRNA_H-akashiwo_Contig940.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=178bp VSPRVLKHCARQLACLLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLback to top mRNA from alignment at H-akashiwo_Contig940:390718..391251- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig940.13.1 ID=mRNA_H-akashiwo_Contig940.13.1|Name=mRNA_H-akashiwo_Contig940.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=534bp|location=Sequence derived from alignment at H-akashiwo_Contig940:390718..391251- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig940:390718..391251- >mRNA_H-akashiwo_Contig940.13.1 ID=mRNA_H-akashiwo_Contig940.13.1|Name=mRNA_H-akashiwo_Contig940.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=534bp|location=Sequence derived from alignment at H-akashiwo_Contig940:390718..391251- (Heterosigma akashiwo CCMP452)back to top |