mRNA_H-akashiwo_Contig94.19.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A7S3XRE8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRE8_HETAK) HSP 1 Score: 142 bits (358), Expect = 7.370e-42 Identity = 76/88 (86.36%), Postives = 84/88 (95.45%), Query Frame = 1 Query: 34 TPAGLLVLAGSLAGVDKDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQVEQ 297 TPAG+LVLAGSLAGV+KDF E+KGK+AR +LGI+LARFVCAPV+IFGLI+AFK GFMPADPVLLFVLLLESCMPSAQNSVVILQVEQ Sbjct: 1 TPAGVLVLAGSLAGVNKDFAENKGKLARTLLGISLARFVCAPVIIFGLIQAFKAVGFMPADPVLLFVLLLESCMPSAQNSVVILQVEQ 88
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 9.490e-16 Identity = 50/106 (47.17%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSL----------AGVDKDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQVE 294 ALRTLG+AY PA +L LAG+L A D E + V + +ARF+ PV +G++R G +PADP+L FVLL+++CMPSAQNSVVILQ+E Sbjct: 313 ALRTLGSAYVPAVILTLAGTLHQSVRSPSAVAAASNDKEEKTVSLGSRVAALMVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQLE 418
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: R1CQU2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQU2_EMIHU) HSP 1 Score: 77.4 bits (189), Expect = 1.650e-14 Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 10 LRTLGAAYTPAGLLVLAGSLAGVDKDFTESKGKV---ARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQVE 294 L LG AY+PA LLVLAGSLA + +G++ A V+ IA+ARF P++ F L+ A G +PADP+ VLLL+SCMPSAQNSV+ LQV+ Sbjct: 332 LEALGKAYSPAALLVLAGSLAAPTEQRRAGEGELGASASHVVAIAVARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMPSAQNSVLALQVD 429
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A7S2V2A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2A0_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.030e-14 Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSLA-----GVDKDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQVE 294 A L AY P GL++LAGSLA G+DK+ + + I+L RFV P++ GL+R G DPVLLFVL+++SCMPSAQN+V+ILQVE Sbjct: 19 AAEALSKAYNPCGLIILAGSLALAPKGGIDKNMMGN-------ISVISLGRFVLTPLLTAGLLRLGINLGLSLHDPVLLFVLMMQSCMPSAQNNVLILQVE 112
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 1.100e-13 Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSLAGVD--KDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQV 291 A L AAYTP+G+LVLAGSLA K F+ K +L + +AR+ P+ GL+ +G +P DP+LLFVLL+ESCMPSAQN+V++LQV Sbjct: 392 AFSNLTAAYTPSGVLVLAGSLANCPPGKWFSRDTQKT---ILAVGMARWFLLPLATSGLLFGGVKYGLVPPDPMLLFVLLIESCMPSAQNTVIMLQV 485
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.780e-12 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSLAGVDKDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPA-DPVLLFVLLLESCMPSAQNSVVILQVEQ 297 ALRT+G+AY P LL+L+GSLA + F + V R + + RF P V F + K G +P DP+LLFV+LL+ CMPSAQNSV+ILQ+E+ Sbjct: 330 ALRTMGSAYVPCVLLILSGSLAQGLEGFDSN---VFRRAMLVMFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQLER 424
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.580e-12 Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSLAGVDKDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPA-DPVLLFVLLLESCMPSAQNSVVILQVEQ 297 ALRT+G+AY P LLVLAGSLA K + I ARF P F L+ + F +P+ DP+L FVLLL++CMP AQN+VVILQ++Q Sbjct: 348 ALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQ 445
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A0G4EKC6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EKC6_VITBC) HSP 1 Score: 70.1 bits (170), Expect = 6.270e-12 Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSL---AGVDKDFTESKGKVARAVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQVE 294 AL+ LG + PA LVLAGS +G + D S R VL +A ARFVCAP + F L+ + G + DP L FVLL++ CMP+AQ SVVILQ+E Sbjct: 357 ALQILGQGFRPAAALVLAGSFVTPSGGESDTVISLRNFRR-VLPVAFARFVCAPTIAFTLLTIGRRLGLIMNDPFLWFVLLMQGCMPAAQQSVVILQLE 454
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A7S1ER62_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER62_9RHOD) HSP 1 Score: 69.7 bits (169), Expect = 8.600e-12 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSLAGVDKDFTESKGKVAR-----AVLGIALARFVCAPVVIFGLIRAFKVFGFMPADPVLLFVLLLESCMPSAQNSVVILQVE 294 AL+TLG+AYTP +LVLAGSLA K + S + GI + RF+ P+ G +R + G + DP+ F +L+ES MPSAQNSV+ILQ+E Sbjct: 367 ALKTLGSAYTPCAVLVLAGSLATPQKSASSSSSAAVSWSRIMQIAGICIVRFIFMPIFALGTLRTTALLGIL-LDPMQKFTILMESIMPSAQNSVLILQLE 466
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Match: A0A7S2URC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URC9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.180e-11 Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 7 ALRTLGAAYTPAGLLVLAGSLAGVDKDF--------TESKGKVARA-VLGIALARFVCAPVVIFGLIRAFKVFGFMP--------ADPVLLFVLLLESCMPSAQNSVVILQVE 294 AL TLG+AY PA +LVLAGSLAG T S K++ A V I ++RF AP++ FG+++ + +P A V++FVLL+E CMP AQN+V+ILQ++ Sbjct: 331 ALSTLGSAYLPAAVLVLAGSLAGKKAPTPDGEATTTTTSNNKISPASVAAIMMSRFCLAPILSFGIVKLLDLLKLLPSAAGTGARARAVVMFVLLMEGCMPPAQNTVIILQLD 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig94.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig94.19.1 >prot_H-akashiwo_Contig94.19.1 ID=prot_H-akashiwo_Contig94.19.1|Name=mRNA_H-akashiwo_Contig94.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=99bp MAALRTLGAAYTPAGLLVLAGSLAGVDKDFTESKGKVARAVLGIALARFVback to top mRNA from alignment at H-akashiwo_Contig94:870334..870630+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig94.19.1 ID=mRNA_H-akashiwo_Contig94.19.1|Name=mRNA_H-akashiwo_Contig94.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=297bp|location=Sequence derived from alignment at H-akashiwo_Contig94:870334..870630+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig94:870334..870630+ >mRNA_H-akashiwo_Contig94.19.1 ID=mRNA_H-akashiwo_Contig94.19.1|Name=mRNA_H-akashiwo_Contig94.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=297bp|location=Sequence derived from alignment at H-akashiwo_Contig94:870334..870630+ (Heterosigma akashiwo CCMP452)back to top |