mRNA_H-akashiwo_Contig94.13.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig94.13.1
Unique NamemRNA_H-akashiwo_Contig94.13.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK)

HSP 1 Score: 1010 bits (2611), Expect = 0.000e+0
Identity = 499/521 (95.78%), Postives = 510/521 (97.89%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGGSREYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTWHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERDVEMLKQC 2034
            VLAVYVP+SYRSAL CPDSLQW+AA+NAILDQLESSQFAHFVPR PGMHVIPSH+VFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG RLFLHICAVEDLELQSL+FSNAFIQVPMSSQGARS KVYVKVPPGMD PPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAI+VDD+QVASQSV LQQQFLDQLGAEFKYKLSPTSRF+GYDLERDRVAKTIKVTAASKIAHILDQHGLQDVH+KFTPCAPGVHMSADSSSEK DLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYL RTPGKGMVFGGSR+YRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRT HLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFER+VEML  C
Sbjct:  214 VLAVYVPKSYRSALECPDSLQWRAALNAILDQLESSQFAHFVPRTPGMHVIPSHFVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAGWRLFLHICAVEDLELQSLDFSNAFIQVPMSSQGARSPKVYVKVPPGMDVPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIHVDDVQVASQSVALQQQFLDQLGAEFKYKLSPTSRFVGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERNVEMLNVC 734          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK)

HSP 1 Score: 820 bits (2118), Expect = 6.190e-293
Identity = 391/496 (78.83%), Postives = 450/496 (90.73%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGGSREYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTWHLNIKRHFLHDEVSEERLSVEHIPGKY 1959
            VLAVYVPRSYR+AL CPDSL+WKAA+NAILDQLESSQFAHFVPR P M VIPSH+VFAYKEPAEEGGEG+YKVRLVLDGSKQVRG+S++DSWAPSLPHAG RLFLHICAVEDLEL SL+ +NAF+QVPMSSQGA+S +VY+KVPPGMDAPPGMVLELDRALEGSRQAGNLW+K+LR  LRRWGFVPLDTAETIYV+GSL+ GDFQMLAI VDDIQVASQSV LQ++F++QLG+ FK+K SP SRF+GYD+ERDR AKTIKVTAASK+A +L+ HGL +VH K+TPCAPGVH+S+DSS ++ D+  YQ+LVGAF F++EFRPDI+F+VGKLS+FL  PN DHMDAALYLAGYL RT  KGMVFGG+R+Y +R++SDSDHGNCPD+GRSTSG+ VF G SLI+HKSKLQHITTL A EAELVALVL+ICEA+WV +MLW+L+  R  ++AYTDCMAVVHMANHQK LQRT HLNIKRHFL DEVSE+RLSVEHIPGK+
Sbjct:   82 VLAVYVPRSYRAALECPDSLRWKAALNAILDQLESSQFAHFVPRTPDMQVIPSHFVFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHICAVEDLELLSLDVNNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRRWGFVPLDTAETIYVRGSLSAGDFQMLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASRFVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK)

HSP 1 Score: 820 bits (2118), Expect = 3.550e-290
Identity = 391/496 (78.83%), Postives = 450/496 (90.73%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGGSREYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTWHLNIKRHFLHDEVSEERLSVEHIPGKY 1959
            VLAVYVPRSYR+AL CPDSL+WKAA+NAILDQLESSQFAHFVPR P M VIPSH+VFAYKEPAEEGGEG+YKVRLVLDGSKQVRG+S++DSWAPSLPHAG RLFLHICAVEDLEL SL+ +NAF+QVPMSSQGA+S +VY+KVPPGMDAPPGMVLELDRALEGSRQAGNLW+K+LR  LRRWGFVPLDTAETIYV+GSL+ GDFQMLAI VDDIQVASQSV LQ++F++QLG+ FK+K SP SRF+GYD+ERDR AKTIKVTAASK+A +L+ HGL +VH K+TPCAPGVH+S+DSS ++ D+  YQ+LVGAF F++EFRPDI+F+VGKLS+FL  PN DHMDAALYLAGYL RT  KGMVFGG+R+Y +R++SDSDHGNCPD+GRSTSG+ VF G SLI+HKSKLQHITTL A EAELVALVL+ICEA+WV +MLW+L+  R  ++AYTDCMAVVHMANHQK LQRT HLNIKRHFL DEVSE+RLSVEHIPGK+
Sbjct:  258 VLAVYVPRSYRAALECPDSLRWKAALNAILDQLESSQFAHFVPRTPDMQVIPSHFVFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHICAVEDLELLSLDVNNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRRWGFVPLDTAETIYVRGSLSAGDFQMLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASRFVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK)

HSP 1 Score: 678 bits (1750), Expect = 2.330e-237
Identity = 335/520 (64.42%), Postives = 405/520 (77.88%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGG--SREYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTWHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERDVEML 2025
            V AVY+P+ YR AL CPDS QW  AIN IL QLE ++FAHFV R PGM+VIPS YVFAYK+P E+GGEG YKVRLVLDGSKQ  G+ ++DSWAPSLP AG RLFLHICAVEDLEL S++  NA+IQVPMS+ G  S K++++ P GM+ P G+VLELDRALEGS+QAG+LWYK+LR VL  +GF PL+TAETIYV+G+LA G FQMLAI+VDDIQ+ASQS  L++QF+ ++  +F+ K     +F+G DL RDR A+TIKVT  +KIA +L++HGL++ H KFTPCAPGV MS DS+SEK D+  YQ LVG   F++EFR D  F+VG+LSR+L+CPN DH +AA YLAGYL RT   GMVFGG     Y IRI++DSDHG CPD+ RSTSG++V+ G SLIIHKSKLQH+ TL + EAELVAL+L++CEA+WVR ML  L   R  M AYTD MAVV MAN Q+ LQRT HLNIKRHFL DEV+E RLSV H+ GK N  D+FTKP  RV FER  E L
Sbjct:   39 VFAVYIPKGYRDALDCPDSPQWVTAINKILTQLEDNKFAHFVKRTPGMNVIPSRYVFAYKDPVEKGGEGTYKVRLVLDGSKQEYGVDYMDSWAPSLPSAGWRLFLHICAVEDLELASVDVKNAYIQVPMSTGG--SYKIHIRAPQGMEVPQGLVLELDRALEGSKQAGHLWYKYLRGVLEEFGFAPLNTAETIYVRGNLAEGTFQMLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKFVGLDLSRDREARTIKVTCETKIAQLLERHGLENAHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPLARVHFERLREAL 556          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S4DE91_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE91_HETAK)

HSP 1 Score: 629 bits (1623), Expect = 5.170e-217
Identity = 311/327 (95.11%), Postives = 320/327 (97.86%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSV 1452
            VLAVYVP+SYRSAL CPDSLQW+AA+NAILDQLESSQFAHFVPR PGMHVIPSH+VFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG RLFLHICAVEDLELQSL+FSNAFIQVPMSSQGARS KVYVKVPPGMD PPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAI+VDD+QVASQSV LQQQFLDQLGAEFKYKLSPTSRF+GYDLERDRVAKTIKVTAASKIAHILDQHGLQDVH+KFTPCAPGVHMSADSSSEK DLQLYQALVGAFMFVKEFRPDINFSV
Sbjct:  214 VLAVYVPKSYRSALECPDSLQWRAALNAILDQLESSQFAHFVPRTPGMHVIPSHFVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAGWRLFLHICAVEDLELQSLDFSNAFIQVPMSSQGARSPKVYVKVPPGMDVPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIHVDDVQVASQSVALQQQFLDQLGAEFKYKLSPTSRFVGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSV 540          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK)

HSP 1 Score: 570 bits (1468), Expect = 2.000e-197
Identity = 273/362 (75.41%), Postives = 320/362 (88.40%), Query Frame = 1
Query:  874 RSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGGSREYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTWHLNIKRHFLHDEVSEERLSVEHIPGKY 1959
            R+ K Y+KV  GMDAPPGMVLELDRALEGSRQAGNLW+K+LR  LRRWGFVPLDTAETIYV+GSL+ GDFQMLAI VDDIQVASQSV LQ++F++QLG+ FK+K SP SRF+GYD+ERDR AKTIKVTAASK+A +L+ HGL +VH K+TPCAPGVH+S+DSS ++ D+  YQ+LVGAF F++EFRPDI+F+VGKLS+FL  PN DHMDAALYLAGYL RT  KGMVFGG+R+Y +R++SDSDHGNCPD+GRSTSG+ VF G SLI+HKSKLQHITTL A EAELVALVL+ICEA+WV +MLW+L+  R  ++AYTDCMAVVHMANHQK LQRT HLNIKRHFL DEVSE+RLSVEHIPGK+
Sbjct:   20 RAPKFYIKVS-GMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRRWGFVPLDTAETIYVRGSLSAGDFQMLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASRFVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S3Y8J3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J3_HETAK)

HSP 1 Score: 415 bits (1066), Expect = 1.560e-135
Identity = 202/217 (93.09%), Postives = 211/217 (97.24%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVA 1122
            VLAVYVP+SYRSAL CPDSLQW+AA+NAILDQLESSQFAHFVPR PGMHVIPSH+VFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG RLFLHICAVEDLELQSL+FSNAFIQVPMSSQGARS KVYVKVPPGMD PPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYV+GSLA GDFQMLAI+VDD+QV+
Sbjct:  214 VLAVYVPKSYRSALECPDSLQWRAALNAILDQLESSQFAHFVPRTPGMHVIPSHFVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAGWRLFLHICAVEDLELQSLDFSNAFIQVPMSSQGARSPKVYVKVPPGMDVPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVRGSLADGDFQMLAIHVDDVQVS 430          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S3Y8F0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8F0_HETAK)

HSP 1 Score: 325 bits (834), Expect = 9.130e-100
Identity = 201/375 (53.60%), Postives = 206/375 (54.93%), Query Frame = 1
Query:    1 GVAPDIGSLHPFGCSASIHIPFARRTGGNKLAPRSEDGVFLGYSAEGDSYVVHVLGTVGTVRTTRDVVFHDRVFPWLARSPSSSSSPSLASDAT----PVSGAGLRDGTGWDNPLPVAGGAPRRPPAARRLSI-------------------------------------------LRIVPLRSLGVGPSPI-------------------------------------------------------------------------------------------------GRRAAAMKVATG-----VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEG 678
            GVAPDIGSLHPFGCSASIHIPFARRTGGNKLAPRSEDGVFLGYS EGDSYVVHVLGTVGT+RTTRDVVFHDRVFPWLARS SSSS PSLAS A     P SGAGLRDGTGWD+PLPV GGA  RPPAARRLSI                                           LRIVP RSLGVGP P+                                                                                                 G R+       G     VLAVYVP+SYRSAL CPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEG
Sbjct:  175 GVAPDIGSLHPFGCSASIHIPFARRTGGNKLAPRSEDGVFLGYSTEGDSYVVHVLGTVGTIRTTRDVVFHDRVFPWLARSSSSSSPPSLASGAARRLGPDSGAGLRDGTGWDDPLPVVGGAACRPPAARRLSIVSPVGPEQGPPLTKGPAEEVCPQGEPPATFTDSWGQTVQRSRELRIVPPRSLGVGPGPVSLPPSPPCXXXXXXXXXXXXXXXXSVVPPRRSRRLREVRDRQESCRDEGGGRDGSRVDYASLLWDDGPPVNYVELMREGGIRNEAYLSSLGDCFDLGGERSVMFIEVDGAREEEVLAVYVPKSYRSALECPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEG 549          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A7S3Y451_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y451_HETAK)

HSP 1 Score: 241 bits (614), Expect = 8.690e-72
Identity = 114/133 (85.71%), Postives = 126/133 (94.74%), Query Frame = 1
Query:  472 VLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQG 870
            VLAVYVPRSYR+AL CPDSL+WKAA+NAILDQLESSQFAHFVPR P M VIPSH+VFAYKEPAEEGGEG+YKVRLVLDGSKQVRG+S++DSWAPSLPHAG RLFLHICAVEDLEL SL+ +NAF+QVP+SSQG
Sbjct:   82 VLAVYVPRSYRAALECPDSLRWKAALNAILDQLESSQFAHFVPRTPDMQVIPSHFVFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHICAVEDLELLSLDVNNAFVQVPISSQG 214          
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Match: A0A438DPC7_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DPC7_VITVI)

HSP 1 Score: 236 bits (602), Expect = 5.570e-64
Identity = 204/722 (28.25%), Postives = 316/722 (43.77%), Query Frame = 1
Query:    1 GVAPDIGSLHPFGCSA---SIHIPFARRTGGNKLAPRSEDGVFLGYSAEGDSYVVHVLGTVGTVRTTRDVVFHDRVFPWLA-RSPSSSSSPS---LASDATPV-------------------SGAGLRDGTGWDNPLPVAGGAPRR--PPAARRLSILRIVP----LRSLGVGPSPIGRRAAAMKVA------------TGVLAVYVPRSYRSALGCPDSLQWKAAINAILDQLESSQFAHFVPRAPGMHVIPSHYVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAG*RLFLHICAVEDLELQSLNFSNAFIQVPMSSQGARSLKVYVKVPPGMDAP-PGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFLDQLGAEFKYK-LSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGGSREYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQA-YTDCMAVVHMANHQKGLQRTWHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERDVEML 2025
            G  P    +  FGC A   ++H+P       +K APR++  +FLGY     +Y ++ L T   + T+RDVVFH+ +FP+ +  SPSS+S P    L SD +P                    +    +       P P+   + R   PP A R  +   V     L  L   P    R      V+              V     P SY  A        W+ A+ + L  LE++         PG   I   +V+  K  ++ G   ++K RLV  G  Q+ GI + D+++P+      R  L + A ++  L  L+ +NAF+   +  +      +Y+  PPG+      +V  L ++L G +QA   W+      ++  GFV      +++      G  F  L IYVDDI +    V         L + F+ K L     F+G ++ R +  K I ++       IL   G         P      +S DS    +D   Y+ LVG  +++   RPDI +SV  LSRF+  P   HM+AAL +  YL  +PG+G+ F    +  +R  SDSD   CP S RST+G  VF G SLI  ++K Q   +L + EAE  A+  + CE  W+R++L  L     +    Y D  A +H+A +    +RT H+ +  HF+ D++ +  +  +HI       DVFTKP  +  F   +  L
Sbjct:   81 GKLPSYSHIRVFGCLAYATNVHVP-------HKFAPRAKRCIFLGYPVGQKAYKLYDLDT-HQMFTSRDVVFHETIFPYESIPSPSSNSDPVIPLLISDLSPPVPQPSPPEPISPIQQPSLPNSVSTQPSXASPPPEPILRRSQRPIIPPMALRDYVCNQVTSPNHLPPLSSSPQKGTRYPLCNFVSYHRYSPQHRSFTAAVSQDIEPTSYAEAAS---HSHWQEAMQSELAALEANHTWSLTSLPPGKKPIGCRWVYKIKRHSD-GTIERFKARLVAKGYTQLEGIDYHDTFSPTAKMITVRCLLALAAAQNWSLHQLDVNNAFLHGDLHEE------IYMSPPPGLRRQGENLVCHLHKSLYGLKQASRQWFAKFSTAIQAAGFVQSKADYSLFT--CRKGKSFTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSK--KGISISQRKYTLEILKDGGFLGAKPVNFPMEQNTKLS-DSGELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRSLLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTDQLADVFTKPLGKETFSTMIHKL 779          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig94.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1VJZ2_HETAK0.000e+095.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DC66_HETAK6.190e-29378.83Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y454_HETAK3.550e-29078.83Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V1TGB8_HETAK2.330e-23764.42Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4DE91_HETAK5.170e-21795.11Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y431_HETAK2.000e-19775.41Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8J3_HETAK1.560e-13593.09Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8F0_HETAK9.130e-10053.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y451_HETAK8.690e-7285.71Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A438DPC7_VITVI5.570e-6428.25Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig94contigH-akashiwo_Contig94:598492..600839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog3827.XP_004514121.1
PFAMsRVT_2,Retrotran_gag_2,Retrotran_gag_3,Retrotrans_gag,gag_pre-integrs,rve
Model size2034
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.84e-49
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37RIF@33090|Viridiplantae,3G9AM@35493|Streptophyta,4JTRP@91835|fabids
Descriptioncysteine-rich RLK (RECEPTOR-like protein kinase) 8
Cds size1179
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388051.107339-CDS-H-akashiwo_Contig94:598491..5996701681388051.107339-CDS-H-akashiwo_Contig94:598491..599670Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig94 598492..599670 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388051.1217444-UTR-H-akashiwo_Contig94:599670..6000541681388051.1217444-UTR-H-akashiwo_Contig94:599670..600054Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig94 599671..600054 -
1681388051.1347158-UTR-H-akashiwo_Contig94:600239..6003231681388051.1347158-UTR-H-akashiwo_Contig94:600239..600323Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig94 600240..600323 -
1681388051.146707-UTR-H-akashiwo_Contig94:600452..6008391681388051.146707-UTR-H-akashiwo_Contig94:600452..600839Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig94 600453..600839 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig94.13.1prot_H-akashiwo_Contig94.13.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig94 598492..599670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig94.13.1

>prot_H-akashiwo_Contig94.13.1 ID=prot_H-akashiwo_Contig94.13.1|Name=mRNA_H-akashiwo_Contig94.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=393bp
MSSQGARSLKVYVKVPPGMDAPPGMVLELDRALEGSRQAGNLWYKFLRRV
LRRWGFVPLDTAETIYVKGSLAGGDFQMLAIYVDDIQVASQSVTLQQQFL
DQLGAEFKYKLSPTSRFIGYDLERDRVAKTIKVTAASKIAHILDQHGLQD
VHLKFTPCAPGVHMSADSSSEKEDLQLYQALVGAFMFVKEFRPDINFSVG
KLSRFLACPNADHMDAALYLAGYLCRTPGKGMVFGGSREYRIRIISDSDH
GNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICE
ARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTWHLNIKRHFL
HDEVSEERLSVEHIPGKYNFTDVFTKPQNRVLFERDVEMLKQC
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mRNA from alignment at H-akashiwo_Contig94:598492..600839-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig94.13.1 ID=mRNA_H-akashiwo_Contig94.13.1|Name=mRNA_H-akashiwo_Contig94.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2348bp|location=Sequence derived from alignment at H-akashiwo_Contig94:598492..600839- (Heterosigma akashiwo CCMP452)
GGTGTGGCCCCTGACATTGGCTCTCTTCATCCTTTTGGCTGCTCGGCTTC TATCCACATTCCCTTTGCTCGCCGCACGGGTGGCAACAAGCTCGCGCCCA GGTCTGAGGACGGGGTTTTTCTGGGGTACTCCGCGGAGGGTGATAGCTAC GTAGTCCATGTTCTGGGTACTGTTGGGACTGTCCGCACCACTCGTGATGT TGTTTTTCATGACCGTGTCTTTCCTTGGCTGGCGCGGTCTCCTTCTTCCT CCTCTTCTCCCTCGTTGGCCTCTGACGCTACTCCTGTTTCGGGCGCCGGT CTCCGGGATGGCACGGGCTGGGACAATCCATTGCCTGTTGCTGGTGGGGC CCCGCGCAGGCCGCCTGCGGCGCGCCGCCTCTCCATTGTGTCTCCTGTTG GGCCTGAGCAGGGGCCGCCACTCACTCGCGGGCCGGCCGAGGAGATCTGC CCTCAGGGCGAGCCGCCTGCAACTTTCACTGATTCCTGGGGGCAGACTGT TCAGCGTAGCCGTGAGCTGCGCATCGTTCCTCTGCGCTCTCTGGGTGTGG GCCCTAGCCCGATCGGCAGGAGAGCTGCCGCGATGAAGGTGGCAACCGGG GTGGCTCCCGTGTGGACTACGCGTGGCTCCTCTGGGATGATGACCCTCCT GTGGACTATGTTGAGCTCATGCGGGAGGGGGGCATTCAAAATGAGGCCTA TCTTTCTTCTCTCAGTGACTGCTTTGATCTGGGGGGTGAGCGCTCGGTCA TGTTCATTGAGGTTGATGGTGCCCAGGAGGAGGAGGTTTTGGCTGTATAT GTGCCCAGGTCCTACCGCTCTGCTCTCGGGTGTCCTGATTCTTTGCAGTG GAAGGCCGCCATCAATGCTATTCTTGATCAGCTGGAGTCCTCCCAGTTCG CGCACTTTGTTCCGCGGGCGCCGGGTATGCACGTCATTCCGTCTCACTAC GTCTTTGCCTACAAGGAGCCTGCTGAGGAGGGCGGCGAAGGGAAGTACAA AGTCCGTCTTGTGCTGGATGGTAGTAAGCAAGTCCGGGGCATCTCCTTTG TTGACTCCTGGGCGCCGTCTCTTCCCCATGCTGGCTAGCGTCTCTTTCTG CACATATGTGCTGTGGAGGATTTGGAGCTTCAGTCTCTTAATTTCAGCAA TGCCTTTATTCAGGTGCCGATGTCCTCGCAAGGGGCGCGCTCTCTGAAGG TGTATGTCAAGGTGCCCCCTGGGATGGATGCTCCGCCGGGGATGGTCCTT GAGCTGGATAGGGCACTTGAGGGTTCCAGGCAGGCCGGCAACCTGTGGTA CAAGTTCCTGCGGCGTGTTCTCCGCCGCTGGGGTTTTGTTCCGCTCGATA CTGCTGAGACCATCTATGTCAAGGGCTCTCTTGCTGGGGGTGATTTCCAG ATGCTGGCCATCTATGTGGACGATATCCAGGTTGCCTCGCAGTCCGTTAC TCTTCAGCAGCAGTTTCTGGACCAGCTCGGTGCTGAGTTCAAATACAAGC TCTCGCCCACCTCTCGTTTTATTGGCTATGATCTTGAGCGTGATCGGGTG GCCAAGACCATCAAGGTCACTGCTGCCAGCAAGATTGCTCACATTCTAGA CCAGCACGGTCTCCAGGATGTGCACTTGAAGTTCACTCCTTGTGCTCCAG GTGTTCACATGTCTGCTGACTCGTCATCTGAGAAGGAGGATCTTCAGCTG TACCAGGCGCTTGTTGGGGCATTTATGTTTGTCAAGGAGTTCCGGCCTGA CATCAACTTTTCTGTTGGCAAGCTCTCCCGGTTCCTGGCCTGTCCCAATG CTGACCACATGGATGCGGCTCTCTATCTCGCTGGTTATCTGTGCCGAACG CCGGGGAAGGGCATGGTGTTTGGTGGGTCTCGTGAATACCGCATCAGGAT TATCAGTGATAGTGATCATGGAAATTGCCCGGACTCTGGCAGATCTACCT CTGGCATAGCCGTGTTCGCTGGTGACTCCCTAATTATCCACAAGTCCAAG CTCCAGCACATCACCACTTTGGGTGCACCTGAGGCTGAGCTGGTCGCTCT TGTTCTTTCCATCTGCGAGGCCAGGTGGGTGCGCGCCATGCTCTGGCAGC TGGTCGGGGCTCGGGATCGCATGCAGGCGTACACCGATTGCATGGCTGTT GTACACATGGCGAACCACCAGAAGGGCCTGCAGCGCACCTGGCATCTCAA CATCAAGAGGCATTTTCTGCATGATGAGGTTTCTGAAGAGCGTTTGTCTG TTGAGCACATCCCTGGAAAGTACAACTTCACTGATGTCTTCACAAAGCCG CAGAACAGGGTTCTCTTTGAGAGGGATGTGGAGATGCTCAAGCAATGT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig94:598492..600839-

>mRNA_H-akashiwo_Contig94.13.1 ID=mRNA_H-akashiwo_Contig94.13.1|Name=mRNA_H-akashiwo_Contig94.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1179bp|location=Sequence derived from alignment at H-akashiwo_Contig94:598492..600839- (Heterosigma akashiwo CCMP452)
ATGTCCTCGCAAGGGGCGCGCTCTCTGAAGGTGTATGTCAAGGTGCCCCC
TGGGATGGATGCTCCGCCGGGGATGGTCCTTGAGCTGGATAGGGCACTTG
AGGGTTCCAGGCAGGCCGGCAACCTGTGGTACAAGTTCCTGCGGCGTGTT
CTCCGCCGCTGGGGTTTTGTTCCGCTCGATACTGCTGAGACCATCTATGT
CAAGGGCTCTCTTGCTGGGGGTGATTTCCAGATGCTGGCCATCTATGTGG
ACGATATCCAGGTTGCCTCGCAGTCCGTTACTCTTCAGCAGCAGTTTCTG
GACCAGCTCGGTGCTGAGTTCAAATACAAGCTCTCGCCCACCTCTCGTTT
TATTGGCTATGATCTTGAGCGTGATCGGGTGGCCAAGACCATCAAGGTCA
CTGCTGCCAGCAAGATTGCTCACATTCTAGACCAGCACGGTCTCCAGGAT
GTGCACTTGAAGTTCACTCCTTGTGCTCCAGGTGTTCACATGTCTGCTGA
CTCGTCATCTGAGAAGGAGGATCTTCAGCTGTACCAGGCGCTTGTTGGGG
CATTTATGTTTGTCAAGGAGTTCCGGCCTGACATCAACTTTTCTGTTGGC
AAGCTCTCCCGGTTCCTGGCCTGTCCCAATGCTGACCACATGGATGCGGC
TCTCTATCTCGCTGGTTATCTGTGCCGAACGCCGGGGAAGGGCATGGTGT
TTGGTGGGTCTCGTGAATACCGCATCAGGATTATCAGTGATAGTGATCAT
GGAAATTGCCCGGACTCTGGCAGATCTACCTCTGGCATAGCCGTGTTCGC
TGGTGACTCCCTAATTATCCACAAGTCCAAGCTCCAGCACATCACCACTT
TGGGTGCACCTGAGGCTGAGCTGGTCGCTCTTGTTCTTTCCATCTGCGAG
GCCAGGTGGGTGCGCGCCATGCTCTGGCAGCTGGTCGGGGCTCGGGATCG
CATGCAGGCGTACACCGATTGCATGGCTGTTGTACACATGGCGAACCACC
AGAAGGGCCTGCAGCGCACCTGGCATCTCAACATCAAGAGGCATTTTCTG
CATGATGAGGTTTCTGAAGAGCGTTTGTCTGTTGAGCACATCCCTGGAAA
GTACAACTTCACTGATGTCTTCACAAAGCCGCAGAACAGGGTTCTCTTTG
AGAGGGATGTGGAGATGCTCAAGCAATGT
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