mRNA_H-akashiwo_Contig938.7.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA) HSP 1 Score: 307 bits (787), Expect = 8.310e-104 Identity = 152/192 (79.17%), Postives = 172/192 (89.58%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGID+KAGGRRVGHK+RT+PKSKNVYLNLLVRLYRFL RRTDSKF V+KRLYMSKTN PPMSI+R+ RYMKGKED+ AV+VGTVT+D RLL++PALK+CAL+FTE ARARI+KAGGE LTFDQLALQ PKG+ VLLRGPKNAREAV HFGH ++ ++ HTHC VKPYVRSKGRKFEKARGRR S GFK+ Sbjct: 1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.940e-95 Identity = 141/192 (73.44%), Postives = 162/192 (84.38%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGID+ AGGRRVGHK R+APKS NVYL LL +LY+FL RRT+S F ATV+KRLYMSKTNRPP+ + R++++M GK+ AV+V TVT+D RLLEVP + +CALRFTE AR+RIV AGGECLTFDQLAL+ P GSNCVLLRGPKNAREA HFGH T+ NPHTH VKPYVRSKGRKFEKARGRR SNGFK+ Sbjct: 1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN) HSP 1 Score: 284 bits (726), Expect = 1.590e-94 Identity = 139/192 (72.40%), Postives = 164/192 (85.42%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGIDI AGGRRVGHK RT KS+NVYL LLV+LYRFL RRTDS F TV+KRL+MS+TNRPP+S++ +AR+M+ K+DK+AVLVGT+T+D R+L VP + +CALRFTE ARARIVKAGGECLTFDQLAL+APKGSN VLLRGPK ARE +HFGH ++ + THC VKPYVR+KGRKFEKARGRR S GFK+ Sbjct: 1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA) HSP 1 Score: 283 bits (723), Expect = 6.850e-94 Identity = 146/201 (72.64%), Postives = 168/201 (83.58%), Query Frame = 3 Query: 9 VERSSN-MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDK--VAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 RS N MGID+ AGGRRVGHK+RTAP S NVYL LLV+LY FL RRT S FC TV KRL+MSKTN+PP+S++++A+YM +E K AV+VGTVT+D+RL E+PAL++CALRFTE ARARIVKAGGECLTFDQLAL+APKGSNCVLLRG N REA+ HFGH + N HTH NVKPYVRSKGRKFEKARGRRRS GFK+ Sbjct: 5 TRRSYNKMGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA) HSP 1 Score: 282 bits (722), Expect = 8.770e-94 Identity = 140/196 (71.43%), Postives = 166/196 (84.69%), Query Frame = 3 Query: 15 RSSNMGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 R+ MGID+KAGGR+V HK R APKS+NVYL LLV+LY FL RRTDSKFC V+KRLYMSK N+PP+S++++AR+M EDK+AV+VG VT+DVRL E+P L++CALRFT ARARI+KAGGECLTFDQLAL AP GS VLLRG KN REA+ HFGH TS +PHTH NVKPY+R+KGRKFE+ARGRRRSNGFK+ Sbjct: 7 RTVAMGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.300e-93 Identity = 138/192 (71.88%), Postives = 164/192 (85.42%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGID+KAGGRRVGHK R+ P S NVYL LLV+LYRFL RRTDSKF V+KRLYMS+TNRPP+S++R+AR+MK K++K AV+VGTVT+D RLLEVP + +CALRFTE ARARI+K+GGECLTFDQLAL+APKGS VLLRGPK RE HFGH ++ + TH +VKPYVRSKGRKFE+ARGRR++NGFKI Sbjct: 1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA) HSP 1 Score: 275 bits (704), Expect = 3.400e-91 Identity = 136/192 (70.83%), Postives = 163/192 (84.90%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGID+K+GGRR GHK RTAPKS NVYL LLV+LYRFL RRTDS F A ++KRL+MSK NRPP++I+R+ R+MKGKE K AV+VGT+T+D R+LEVP L + AL+ T ARARI++AGGE LTFD+LAL+APKG+NCVLLRGP + REA++HFGH ++ N HTH NVKPY RSKGRKFEKARGRRRS GFKI Sbjct: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: B7GAG0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAG0_PHATC) HSP 1 Score: 274 bits (700), Expect = 1.430e-90 Identity = 136/193 (70.47%), Postives = 162/193 (83.94%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRT-APKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGID+KAGGRRVGH A KS+N Y LL++LY+FL+RRTDSKFC TV+KRL+MSK N+PPM ++R+++YM KE K AV+VG VT+DVR+LE P + +CAL FTE AR RIV +GGEC+T DQLAL+APKGSN VLLRGPK +REA+AHFGH+TS NNPHTH VKPYVRSKGRKFEKARGRRRS GFK+ Sbjct: 1 MGIDLKAGGRRVGHSSSMKAVKSQNPYNKLLIKLYKFLDRRTDSKFCGTVLKRLHMSKVNQPPMGLHRLSKYMAQKEGKTAVIVGKVTDDVRMLECPKMSVCALAFTENARKRIVASGGECITLDQLALRAPKGSNTVLLRGPK-SREALAHFGHSTSVNNPHTHTGVKPYVRSKGRKFEKARGRRRSRGFKV 192
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A2D4C5G9_PYTIN (60S ribosomal protein L182 putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C5G9_PYTIN) HSP 1 Score: 271 bits (694), Expect = 1.170e-89 Identity = 139/192 (72.40%), Postives = 159/192 (82.81%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MGID+ AGG+ VG K RTAPKSK+VYLNLLVRLYRFL RRTDSKF + V+KRLY S TN+ PMSI RVARYMK E K+AV+VG+VT+D+RL +VP L I ALRFTE ARARIVKAGGECLTFDQLAL+APKG+N VLLRG K ARE HFGH ++ + THC KPYVRSKGRKFE+ARGRR+S GFK+ Sbjct: 1 MGIDLIAGGKVVGKKSRTAPKSKDVYLNLLVRLYRFLARRTDSKFNSIVLKRLYQSNTNQVPMSIARVARYMKDHEGKIAVVVGSVTDDIRLFDVPKLTIAALRFTETARARIVKAGGECLTFDQLALRAPKGANTVLLRGRKTAREVYKHFGHKSTLESVGTHCGAKPYVRSKGRKFERARGRRKSRGFKV 192
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Match: A0A024TMV8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=8 Tax=Eukaryota TaxID=2759 RepID=A0A024TMV8_9STRA) HSP 1 Score: 271 bits (692), Expect = 2.350e-89 Identity = 137/192 (71.35%), Postives = 160/192 (83.33%), Query Frame = 3 Query: 27 MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVKRLYMSKTNRPPMSINRVARYMKGKEDKVAVLVGTVTNDVRLLEVPALKICALRFTEQARARIVKAGGECLTFDQLALQAPKGSNCVLLRGPKNAREAVAHFGHNTSANNPHTHCNVKPYVRSKGRKFEKARGRRRSNGFKI 602 MG DI AGG+ G K RTAPKS+NVYLNLLVRLYRFL RRTD+KF V+KRLYMS+TN+PPMSI RVARYMK KED++AV+VGT+T+D+RL +VP L I AL FTE ARAR++KAGGE LTFDQLAL+APKG N VLLRG K ARE HFGH ++ ++ +TH +VKPYVRSKGRKFEKARGRR S GFK+ Sbjct: 1 MGKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig938.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig938.7.1 >prot_H-akashiwo_Contig938.7.1 ID=prot_H-akashiwo_Contig938.7.1|Name=mRNA_H-akashiwo_Contig938.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=193bp MGIDIKAGGRRVGHKMRTAPKSKNVYLNLLVRLYRFLERRTDSKFCATVVback to top mRNA from alignment at H-akashiwo_Contig938:299661..301013- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig938.7.1 ID=mRNA_H-akashiwo_Contig938.7.1|Name=mRNA_H-akashiwo_Contig938.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1353bp|location=Sequence derived from alignment at H-akashiwo_Contig938:299661..301013- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig938:299661..301013- >mRNA_H-akashiwo_Contig938.7.1 ID=mRNA_H-akashiwo_Contig938.7.1|Name=mRNA_H-akashiwo_Contig938.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=579bp|location=Sequence derived from alignment at H-akashiwo_Contig938:299661..301013- (Heterosigma akashiwo CCMP452)back to top |