mRNA_H-akashiwo_Contig936.8.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A6V2UDE2_HETAK (Uracil-DNA glycosylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2UDE2_HETAK) HSP 1 Score: 485 bits (1248), Expect = 6.540e-172 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1 Query: 1 MVDVHGMPLDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSIS 699 MVDVHGMPLDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSIS Sbjct: 102 MVDVHGMPLDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSIS 334
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A7S2RYA9_9STRA (Uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYA9_9STRA) HSP 1 Score: 282 bits (721), Expect = 7.240e-92 Identity = 135/224 (60.27%), Postives = 164/224 (73.21%), Query Frame = 1 Query: 25 LDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 L W V+ EFS+PYF LV F+ + GK ++PP+ +FSA + C D+++VVIIGQDPYHGP QAHG+SFSV GV PPSLRNMIKEA I P N+G L +W++QGVL+LNAVLTVE ANSHQKKGWEQFTDAVIR V+++ G VFLLWGKPAQ K R I+R KH VI +HPSPL+A KT+ PF+GSRC+SRAN L E+G+ VDW I Sbjct: 107 LPPSWAAVVDKEFSRPYFVNLVKFLKSEASKGKRVFPPRPEIFSAFSHCDFDNVRVVIIGQDPYHGPGQAHGLSFSVKHGVAVPPSLRNMIKEAQSCEGIAKP--NHGNLTHWAKQGVLMLNAVLTVEAHKANSHQKKGWEQFTDAVIRAVNKREAGVVFLLWGKPAQEKGRSINRSKHTVITCSHPSPLAAMKTSEPFLGSRCFSRANEALVEMGQSKVDWRI 328
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A836CBN7_9STRA (Uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN7_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.860e-90 Identity = 134/227 (59.03%), Postives = 164/227 (72.25%), Query Frame = 1 Query: 19 MPL-DGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 MPL D W LS EF KPYF L+ F+ + +GK IYPP++ VF ALN CPLD ++VVI+GQDPYHGP QAHG+SFSV GV PPSLRN++KEA + P KN G L W+ QGVLLLN VLTVEK + SH KKGWEQFTD V+R ++RQ VFLLWGKP+Q K I+R +HRVI +HPSPL ATKT PF GSRC++RAN +L + G+EP+DW++ Sbjct: 1 MPLTDPVWSQALSPEFGKPYFVKLLAFLAKQAAAGKAIYPPKDKVFHALNTCPLDRVRVVILGQDPYHGPGQAHGLSFSVAQGVAQPPSLRNIVKEATACCGTK-PTKN-GCLTPWAVQGVLLLNTVLTVEKGAPLSHHKKGWEQFTDEVVRLLNRQERTIVFLLWGKPSQQKGAHINRARHRVITCSHPSPLGATKTKEPFTGSRCFARANDMLVKSGQEPIDWNL 225
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A2R5GJU8_9STRA (Uracil-DNA glycosylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJU8_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.210e-89 Identity = 129/230 (56.09%), Postives = 164/230 (71.30%), Query Frame = 1 Query: 7 DVHGMPLDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 DV + L+ W L E KPY+ +L F+ +GK I+PP++MVFSAL CP D +KVVI+GQDPYHGP QAHG++FSV G+ PPSLRNM KEA+ DV I P G L+ W++QGVLLLN VLTV K ANSH+ +GWE+FTDA+IR +++ G VF+LWGK AQ A +DR KH VI S+HPSPL A+KT PFIGS+C+SRANA L + G+EP++W I Sbjct: 66 DVAALNLEPGWQAQLGAEARKPYWRSLDAFLRQEAKAGKQIFPPKSMVFSALELCPFDKVKVVILGQDPYHGPGQAHGLAFSVQEGIAIPPSLRNMYKEAMTDVKISKPTT--GSLVPWAKQGVLLLNTVLTVRKGEANSHKDRGWEKFTDAIIRSLNKNKNGLVFMLWGKHAQKVAAPVDRSKHLVITSSHPSPLGASKTKEPFIGSKCFSRANAYLEKKGKEPINWKI 293
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A6A3XXX4_9STRA (Uracil-DNA glycosylase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XXX4_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.850e-89 Identity = 132/224 (58.93%), Postives = 161/224 (71.88%), Query Frame = 1 Query: 25 LDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 L W L EFS+ F+TL F+ K IYPP VF+AL +C +KVVI+GQDPYHGP QAHG+SFSV GVP PPSL+N+ KEA+ DV I P +G L WSRQGVLLLN VLTV + ANSH+K+GWEQFTDAVI VS+++ VFLLWGKPAQ K+ ID +H V+ S+HPSPL ATKTNAPF+GS+C+SRAN+ L E G+EP+DWS+ Sbjct: 84 LHESWFEELQKEFSRGSFQTLARFLEAEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMNDVGIARPT--HGCLSCWSRQGVLLLNTVLTVRRGEANSHKKRGWEQFTDAVISRVSKEASNVVFLLWGKPAQEKSALIDAKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDWSV 305
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: W7TJ25_9STRA (Uracil-DNA glycosylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ25_9STRA) HSP 1 Score: 275 bits (702), Expect = 6.010e-89 Identity = 133/225 (59.11%), Postives = 164/225 (72.89%), Query Frame = 1 Query: 25 LDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVS-IQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 +D W + ++ KPYF L+ F+ +S +++YPP +VFSAL C ++VVIIGQDPYHGPNQAHG++FSVLP PPSL NM KEA+EDVS P+ +G L WSRQGVLLLN VLTV + ANSH+ KGWE FTDAVI+E+ + G VF+LWGKPAQ K + I+R KHRVI AHPSPLSATKTNAPFIGS+ +SR NA L ELG+EP+DW + Sbjct: 110 MDDGWRHFVVSQAGKPYFSRLLAFLSQEISSRQVVYPPYPLVFSALTLCRWLDVRVVIIGQDPYHGPNQAHGLAFSVLPPTQPPPSLNNMFKEAMEDVSGFTKPS--HGNLEAWSRQGVLLLNTVLTVRRGQANSHKGKGWETFTDAVIKELDVKKKGLVFVLWGKPAQEKCKSINRAKHRVIRCAHPSPLSATKTNAPFIGSKSFSRTNAALVELGKEPIDWRL 332
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A1W0AAY8_9STRA (Uracil-DNA glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAY8_9STRA) HSP 1 Score: 272 bits (696), Expect = 7.280e-89 Identity = 125/221 (56.56%), Postives = 160/221 (72.40%), Query Frame = 1 Query: 34 RWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 +W VL+ EF K YF+ L F+ + IYPP++ +F+ALN CP D +KVVI+GQDPYHGP QAHG+ FSV VP PPSLRN+ KEA+ DV I P ++G L++W QGVL+LN VLTV A NSH+K+GWE FTD +IR++S+ S G VFLLWGKPAQ K IDR KH++ S+HPSPL ATKT PFIGSRC+S+ N L + G+EP+DW++ Sbjct: 54 KWREVLAQEFKKSYFKNLDTFLVQEQKKKAKIYPPKDEIFTALNLCPFDKVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLRNIYKEAMSDVKI--PKPSHGCLLSWCHQGVLMLNTVLTVRAAEPNSHKKQGWENFTDVIIRKISQDSEGVVFLLWGKPAQEKIPLIDRSKHKIFTSSHPSPLGATKTAEPFIGSRCFSKTNEYLVQQGKEPIDWTV 272
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A6G0XWG6_9STRA (Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWG6_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.180e-88 Identity = 129/221 (58.37%), Postives = 159/221 (71.95%), Query Frame = 1 Query: 34 RWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 +W +L+ EF K YF+ L F+ + IYPP+ +F+ALN CP D IKVVIIGQDPYHGP QAHG+ FSV GVP PPSL+N+ KEA DV I P ++G L++W QGVLLLN VLTV + ANSH+K+GWE FTDAVIR V+ + G VFLLWGKPAQ K I R KH +I S+HPSPL ATKTN PFIGS+C+SRAN L + G+ P+DW++ Sbjct: 59 KWKDLLAPEFKKSYFKQLEAFLVREQKKKATIYPPKADIFAALNLCPFDGIKVVIIGQDPYHGPGQAHGLCFSVQRGVPPPPSLKNIYKEACSDVGI--PKPSHGSLLSWCNQGVLLLNTVLTVRASEANSHKKQGWETFTDAVIRLVNEHATGVVFLLWGKPAQDKGALISRAKHCIITSSHPSPLGATKTNEPFIGSKCFSRANEYLTKSGKTPIDWTV 277
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: A0A225VMB0_9STRA (Uracil-DNA glycosylase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VMB0_9STRA) HSP 1 Score: 272 bits (696), Expect = 2.270e-88 Identity = 127/220 (57.73%), Postives = 160/220 (72.73%), Query Frame = 1 Query: 37 WHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 W +L EF++ F+ L F+ G K +YPP VF+AL +C +KVVI+GQDPYHGP QAHG+SFSV GVP PPSL+N+ KEA+ DV+I P +G L WSRQGVL+LN VLTV + ANSH+K+GWEQFTDAVI V++ + VFLLWGKPAQ K ID +H V+ S+HPSPL ATKTNAPF+GS+C+SRAN+ L E G+EP+DWS+ Sbjct: 90 WFDLLQKEFTRGSFQALTRFLEGEEGRKKTVYPPPADVFAALRDCAFSDLKVVILGQDPYHGPEQAHGLSFSVRHGVPPPPSLKNIFKEAMNDVAITRPT--HGCLSCWSRQGVLMLNTVLTVRRGEANSHKKRGWEQFTDAVIANVNKHASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDWSV 307
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Match: G4ZX72_PHYSP (Uracil-DNA glycosylase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZX72_PHYSP) HSP 1 Score: 277 bits (709), Expect = 2.980e-88 Identity = 131/224 (58.48%), Postives = 162/224 (72.32%), Query Frame = 1 Query: 25 LDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 696 L W VL EFS+ F+ L F+ G K IYPP VF+AL +C +KVVI+GQDPYHGP QAHG+SFSV G+P PPSL+N+ KEA+ DV I P +G L WS+QGVLLLN VLTV + ANSH+K+GWEQFTDAVI +VS+++ VFLLWGKPAQ K ID +H V+ S+HPSPL ATKTNAPF+GS+C+SRAN+ L E G+EP+DWS+ Sbjct: 245 LHATWFDVLQKEFSRGSFQALTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGIPPPPSLKNIFKEAMNDVGIARPT--HGCLSCWSKQGVLLLNTVLTVRRGEANSHKKRGWEQFTDAVISKVSKEASNVVFLLWGKPAQEKGALIDTKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDWSV 466 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig936.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig936.8.1 >prot_H-akashiwo_Contig936.8.1 ID=prot_H-akashiwo_Contig936.8.1|Name=mRNA_H-akashiwo_Contig936.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=235bp MVDVHGMPLDGRWHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVback to top mRNA from alignment at H-akashiwo_Contig936:274058..274762- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig936.8.1 ID=mRNA_H-akashiwo_Contig936.8.1|Name=mRNA_H-akashiwo_Contig936.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=705bp|location=Sequence derived from alignment at H-akashiwo_Contig936:274058..274762- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig936:274058..274762- >mRNA_H-akashiwo_Contig936.8.1 ID=mRNA_H-akashiwo_Contig936.8.1|Name=mRNA_H-akashiwo_Contig936.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=705bp|location=Sequence derived from alignment at H-akashiwo_Contig936:274058..274762- (Heterosigma akashiwo CCMP452)back to top |