mRNA_H-akashiwo_Contig936.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: F0YFW7_AURAN (Peroxiredoxin-like 2A (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFW7_AURAN) HSP 1 Score: 142 bits (357), Expect = 5.270e-39 Identity = 81/189 (42.86%), Postives = 113/189 (59.79%), Query Frame = 1 Query: 1 LKPIVNGAISGGSISAGDLLNKP-TVVYVVRRPG*VLCREEGYDLSTLKKEGKLGSADLIGIIKEVAPCATAKTDEELGVDDFNKKYFPY-PLYIDEEMEMYKYLGSRKLTQLPFTWN----PFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAAQGL 549 L P+ +GA++G ++ A L +K +++VVRRPG LCREE LS L K + + +GIIKEVAP + A D LGV +F ++YF +Y+DE + Y +LG RKL + P K +RS +A+G+R+K+KG+EGNM GEGL LGGVLV + Y Y E TG PV+ + A L Sbjct: 38 LLPVADGAVTGAAVPASSLWSKAGALIFVVRRPGXPLCREEARGLSELVKI-RGSRQNFVGIIKEVAPTSQAANDTVLGVGEFERQYFGGGAVYLDEGKQFYGFLGDRKLISTRNVFKALVRPLKTWRSLRAVGDRMKSKGIEGNMVGEGLLLGGVLVVDRDGRVTYSYPETTGEPAPVDAVDEALDAL 225
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A482S856_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S856_9ARCH) HSP 1 Score: 129 bits (323), Expect = 1.010e-34 Identity = 64/153 (41.83%), Postives = 102/153 (66.67%), Query Frame = 1 Query: 106 LCREEGYDLSTLKKEGKLGSA-DLIGIIKEVAPCATAKTDEELGVDDFNKKYFP-YPLYIDEEMEMYKYLGSRKLTQ--LPFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAAQGLK 552 +CRE+ ++LS+ K+ L +++GIIKEVAP A+ D +LGV +F ++F +PLY+D + + Y +LG++ L LP +WNPFKLY +K + +R+K KG+EGN+ GEGL GG+L+ + + G+VY++ E TG +P + + A Q K Sbjct: 1 MCREDAFELSSRLKDASLDQEFNIVGIIKEVAPVKGAEADTQLGVGEFQSRFFQGFPLYMDADKKFYAHLGNKSLLSQSLP-SWNPFKLYADYKHMTKRVKDKGIEGNLNGEGLLKGGLLIVTKEQGIVYQHNEETGFCMPYDAVIEALQQFK 152
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A7S2GG07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG07_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.770e-33 Identity = 68/133 (51.13%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 172 LIGIIKEVAPCATAKTDEELGVDDFNKKYF--PYPLYIDEEMEMYKYLGSRKLTQLPFT--WNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGL--VYEYKEVTGRELPVEEIAAAAQGLK 552 L+G+IKEVAP A+TDE LGV +F++KYF YPLY+DEE Y+YLG+RKL+ +P + P+K +R +K++ R+K K +EGNM GEGL GG+LV +P +GL +Y Y+EVTG E+P+++ QGLK Sbjct: 15 LVGVIKEVAPTTQAETDETLGVGEFHEKYFGLQYPLYLDEEKNFYEYLGNRKLS-IPVSAILKPWKAFRYYKSMTARMKEKNIEGNMVGEGLVQGGLLVIAPGTGLDVLYRYEEVTGSEVPMDDFV---QGLK 143
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A7S3JYT0_9STRA (Peroxiredoxin-like 2A n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYT0_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.050e-31 Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 1 Query: 148 EGKLGSADLIGIIKEVAPCATAKTDEELGVDDFNKKYFP-YPLYIDEEMEMYKYLGSRKLTQL----PFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAAQGLK 552 E + S L+GIIKEVAP A+ D LGVD+F KKYF PLY+DE+ Y++LG+RKL L NPF Y + K IGER++ KG+EGNM GEGL LGGVLV +P +++++E+TG + +++ + A L+ Sbjct: 3 EKRASSVPLVGIIKEVAPTKQAQNDTVLGVDEFQKKYFAGAPLYLDEKKLFYQFLGNRKLITLGGFLKALINPFNTYNALKEIGERMRTKGIEGNMVGEGLVLGGVLVIAPDGTTLFQHQEITGTIVDLDKASKALDILE 142
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A7S1G034_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G034_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.220e-27 Identity = 67/158 (42.41%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 70 TVVYVVRRPG*VLCREEGYDLSTLKKEGKLGSADLIGIIKEVAPCATAKTDEELGVDDFNKKYFPYPLYIDEEMEMYKYLGSRKLTQLPFTWNPFK-LYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAA 540 T++++ RRPG CRE+ DLS L + KL +L+GI+KEV + D+E G+ + KYFPYPLY+DE+ MY+ +G+R + T+NP K L S+ A+ R+ K +EGN +GEGL GGV++ Y Y E T ELP+E I AA Sbjct: 11 TIIFLARRPGCHFCREQCLDLSELLRANKLEGFNLMGIVKEV------EVDDE-GLSLMHSKYFPYPLYLDEDYVMYEAMGNRTVKFR--TYNPVKWLTYSWTAL-RRLNKKKIEGNFKGEGLVQGGVIICDSHGNPRYSYLEETMEELPMECIVEAA 158
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A7S1YHB2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YHB2_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.980e-24 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 172 LIGIIKEVAPCATAKTDEELGVDDFNKKYFPYPLYIDEEMEMYKYLGSRKLTQLPFTWNPFKLYRSF---KAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAAQGLK 552 ++G+IKE T DE L F+ KY+PYPLY DE ++ Y YLG+RKL + +NP + F +A+G+R+KAK ++GNM GEGLT GGV+++ Y Y+E E+PVEEI AA Q +K Sbjct: 6 MVGVIKE-----TGVDDEYLT--SFHDKYYPYPLYRDENLDFYSYLGNRKL-EFNVGYNPINWVKGFFGLRAVGKRLKAKNIDGNMNGEGLTKGGVVIFGKDGTPKYAYQE--DGEMPVEEILAAVQMVK 125
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: B8C3P5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3P5_THAPS) HSP 1 Score: 102 bits (253), Expect = 1.640e-23 Identity = 54/152 (35.53%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 103 VLCREEGYDLSTL--KKEGKLGSADLIGIIKEVAPCATAKTDEELGVDDFNKKYFPYPLYIDEEMEMYKYLGSRKLTQLPFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAAQGLK 552 VLCREE ++ L + + L + GI+KEV +++G+ +F +YFP+ LY DE+ Y LG RKL TWNP K+ + + +R+ K + GNM+GEGL GG++++ + Y+E TG E+P+++I A + LK Sbjct: 74 VLCREEARSIAELAARDDKPLDGFGIFGIVKEVGV-------DDVGLAEFQTEYFPFDLYRDEQTAFYSALGLRKLKVS--TWNPIKIVMGIRNMYKRLARKNISGNMKGEGLVQGGIIIFDKTGTARFAYREETGIEVPIDDIIAVVRHLK 216
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A1Z5KLP9_FISSO (Prostamide/prostaglandin F2alpha synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLP9_FISSO) HSP 1 Score: 100 bits (250), Expect = 4.660e-23 Identity = 54/155 (34.84%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 70 TVVYVVRRPG*VLCREEGYDLSTLKKEGKLGSADLIGIIKEVAPCATAKTDEELGVDDFNKKYF-PYPLYIDEEMEMYKYLGSRKLTQLPFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIA 531 T+V+ RRPG VLCRE G LS L+ K+ ++G++KE+ ++ G+ F K+YF +P+Y+DE++++YK +G+R + ++ FKL + + + R+ K +EGN+ GEG GG+L++ K LV+ E +EL + E+A Sbjct: 47 TIVFAARRPGCVLCREHGKQLSNLQSSPKIA---VLGVVKEIGV-------DDAGLKTFQKEYFNSWPIYLDEDLQLYKIMGNRSIFKVK---TMFKLLGNMRKLSRRMSQKRIEGNLVGEGTIQGGILIFDGKGDLVHVQLEDITKELNMSEMA 188
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: A0A1Z5KN03_FISSO (Prostamide/prostaglandin F2alpha synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN03_FISSO) HSP 1 Score: 99.8 bits (247), Expect = 1.210e-22 Identity = 55/155 (35.48%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 70 TVVYVVRRPG*VLCREEGYDLSTLKKEGKLGSADLIGIIKEVAPCATAKTDEELGVDDFNKKYF-PYPLYIDEEMEMYKYLGSRKLTQLPFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIA 531 T+V+ RRPG VLCRE G LS L ++G++KE+ ++ G+ F+K YF +P+Y+DE++++YK +G+R + ++ FKL + + + +R+ K +EGNM GEG GG+L++ K LV+ E +EL + EIA Sbjct: 47 TIVFAARRPGCVLCREHGKQLSNLSSN----KIAVLGVVKEIGV-------DDAGLKSFHKDYFNSWPIYLDEDLQLYKAMGNRSIFKIKTI---FKLLSNMRKLSKRMSQKKIEGNMVGEGTIQGGILIFDGKGDLVHVQLEDITKELNMSEIA 187
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Match: K0T8I1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8I1_THAOC) HSP 1 Score: 97.1 bits (240), Expect = 1.360e-22 Identity = 59/140 (42.14%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 142 KKEGKLGSADLIGIIKEVAPCATAKTDEELGVDDFN---KKYFPYPLYIDEEMEMYKYLGSRKLTQLPFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTLGGVLVYSPKSGLVYEYKEVTGRELPVEEIAAAAQGLK 552 + + L LIG+IKE GVDD +K F DEE YK LGSRKL +WNP K++R + +G R+K KG+ GN +GEGL GGV+++ Y Y+E TG ELPVE+IAAA + LK Sbjct: 3 RDDNPLDGFGLIGLIKET------------GVDDAGISPRKSFTSDSS-DEETAFYKALGSRKLGLT--SWNPIKIFRGLREVGRRLKEKGISGNFKGEGLVQGGVVIFDSAGNPRYAYREKTGEELPVEDIAAAVKALK 127 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig936.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig936.6.1 >prot_H-akashiwo_Contig936.6.1 ID=prot_H-akashiwo_Contig936.6.1|Name=mRNA_H-akashiwo_Contig936.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=89bp MEMYKYLGSRKLTQLPFTWNPFKLYRSFKAIGERIKAKGLEGNMRGEGLTback to top mRNA from alignment at H-akashiwo_Contig936:68247..68801- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig936.6.1 ID=mRNA_H-akashiwo_Contig936.6.1|Name=mRNA_H-akashiwo_Contig936.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=555bp|location=Sequence derived from alignment at H-akashiwo_Contig936:68247..68801- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig936:68247..68801- >mRNA_H-akashiwo_Contig936.6.1 ID=mRNA_H-akashiwo_Contig936.6.1|Name=mRNA_H-akashiwo_Contig936.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=267bp|location=Sequence derived from alignment at H-akashiwo_Contig936:68247..68801- (Heterosigma akashiwo CCMP452)back to top |