mRNA_H-akashiwo_Contig934.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 468 bits (1204), Expect = 1.100e-163 Identity = 238/340 (70.00%), Postives = 260/340 (76.47%), Query Frame = 1 Query: 79 MELHDHLLSLGFQRSGHESCLYVRREGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAE-------------------------------------------------------------LTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 MELHDHL SLGF+RSGHESCLY+ R+GGNELMVA+YVDDLV+SGSS A+VS+FKQSLASKY LTDQ ELTQILGIKVV DKR+KCF+LSQ SFIKDAL+ FGLDYLPAC TP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQ NPE KHFEA + +TTSTVEAEYLALRS+VKDIMWLR LL ++GCPQ EPTPVVEDNSAC+EWAND++V+K+NRHF VSYHLAKEQVSLGTIRMF+ KTHDQVADI TKALNA NF Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANF 340
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 364 bits (935), Expect = 4.320e-124 Identity = 172/199 (86.43%), Postives = 188/199 (94.47%), Query Frame = 1 Query: 10 YPNKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAE 606 +PNKVWKLNKALYGL+QSPR+WYMELHDHL SLGF+RSGHESCLY+ R+GGNELMVA+YVDDLV+SGSS A+VS+FKQSLASKY+LTDQ ELTQILGIKVV DKR+KCF+LSQ SFIKDAL+ FGLDYLPAC TP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQ NPE KHFEA + Sbjct: 64 HPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQ 262
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 205 bits (522), Expect = 7.540e-60 Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 1 Query: 10 YPNKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREG--GNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDAN 477 +P+KVWKL KALYGLRQSPR+WY LH+ LL F RS +ESCLY R+ G + MVA+YVDDLV+S + P++VS K S S++ +TD LT ILGIKV D +KCFYLSQ SF++DA+S FGLDYLPAC TPM + DLTPTPGFKA L DAN Sbjct: 252 HPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A2N9HE67_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HE67_FAGSY) HSP 1 Score: 184 bits (468), Expect = 1.040e-50 Identity = 103/304 (33.88%), Postives = 165/304 (54.28%), Query Frame = 1 Query: 4 STYPNKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAELTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 S PNKV L++ALYGL+Q+PR W+ + + + F S H++ L++RR +++ +YVDD++++G+ + +SDFKQ L ++ + D L LG++V D +YLSQ + D LS L +TP++ LTP G LSDA LYR +VG+L ++ T P++A+ VH Q ++ S+ EAEY AL + +++ LR LL D+G PT + DN + I+ A++ V ++ +H + HL + +S G +R+ + DQ ADIFTK F Sbjct: 235 SNCPNKVCLLHRALYGLKQAPRAWFAKFSNTVHQFSFSSSPHDTTLFIRRSDQGMILLLLYVDDMIITGNDHSGISDFKQFLHQQFKMKDLGHLGYFLGLEVSSDSIG--YYLSQTKYTSDLLSRASLTDTKVVSTPLEMNARLTPLDG--TPLSDATLYRQLVGSLVYLTV-TLPDIAYAVHLKQHI-------------VSRSSTEAEYRALADTTSELLALRWLLEDMGLTHSSPTVIHCDNRSAIQIAHNDVFHERTKHIEIDCHLVRHHLSAGILRLLPVSSSDQTADIFTKTFPPSRF 520
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A5H2XV49_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XV49_PRUDU) HSP 1 Score: 185 bits (470), Expect = 3.290e-49 Identity = 115/329 (34.95%), Postives = 174/329 (52.89%), Query Frame = 1 Query: 7 TYPNKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRR-EGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAE-------------------------LTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 T +KV+KL KALYGL+Q+PR WY E+ +L S F+RS E+ LY R E G ++V+IYVDD+V +G+S AL+S+FK+ + KY++TD L LG+ V+ + + ++ Q + K L FGL+ + P+ L G ++L+D L+R +VG+L ++ TRP++ F L R +P KH A+ + ST EAEY++ ++ +WLR +L D G Q + TP+ DN + I S K RH YH +E + G I M F ++ +Q+ADIFTKAL + F Sbjct: 608 TASHKVYKLKKALYGLKQAPRAWYSEIDTYLTSCNFKRSTSEATLYTRTDEEGKLIIVSIYVDDIVYTGNSNALLSEFKRDMMQKYEMTDLGLLHHFLGMGVL--QTENGVFIHQSKYAKSLLVKFGLEDCKSVTIPLPTGEKLKKVDG--SQLADEGLFRKIVGSLLYLTA-TRPDIMFAASLLSRFMHSPTKKHMGIAKRVLIYIQGTLSYGIEFTRDMNAQNTVALSTAEAEYVSAAEAIAQAIWLRFVLDDFGEMQPDATPLFCDNMSAI--------SMKTRHINRRYHFIREALQEGVIDMRFCRSEEQLADIFTKALPKDRF 923
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: UPI00098DD449 (uncharacterized protein LOC109818890 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI00098DD449) HSP 1 Score: 175 bits (443), Expect = 2.210e-48 Identity = 108/363 (29.75%), Postives = 176/363 (48.48%), Query Frame = 1 Query: 16 NKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAE---------------------------------------------------------------LTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 +KV +L K LYGL+Q+ R W + + + F + +E LY++ +G + L+V +YVDDL+ +G++P++ +FK+ + ++++TD + LGI+V + ++ +++Q S+ KD L F LD TPM+ + L+ + E D LY+S+VG+L ++ TRP++ + V + R P H + A+ +T ST EAEY+A S V +WLR+LL +L PQ EPT + DN + I A + V +++H YH +E +S ++M + KTHDQVADIFTK L E F Sbjct: 16 DKVLRLKKVLYGLKQALRAWNVRIDKYFKEANFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEV--KQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVF 373
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A8J5Z1M9_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z1M9_9ROSI) HSP 1 Score: 178 bits (452), Expect = 4.550e-48 Identity = 111/302 (36.75%), Postives = 167/302 (55.30%), Query Frame = 1 Query: 16 NKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGNELM-VAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAELT------TSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKAL 900 +KV+KL KALYGL+Q+PR WY + +L LGF++S E LYV++ L+ V+IYVDDL+V+GS LV++FK + +D+TD +T LG++V ++ D+ ++SQ +FI L+ F + +T M L+ G + D YRS+VG L ++ TRP+L V L R HF AA+ T +EAEY+A ++V +WLR LL DL Q EPT + DN + + A + V K +HF++ +H +E G + + + DQ+ADI TK L Sbjct: 248 DKVYKLKKALYGLKQAPRAWYDRVDAYLSKLGFEKSLSEPTLYVKKSKDETLLIVSIYVDDLLVTGSKDVLVNEFKAQMQEVFDMTDLGVMTYFLGMEV--NQTDRRIFISQHAFILKILNKFSMQNCKPVSTLMAQGEKLSSI-GDHVRV-DEKEYRSLVGCLLYLTA-TRPDLMHVVSLLTRFMHCCNVLHFRAAKRVLRYIKGTLMLEAEYIAAVAAVNQAIWLRKLLYDLNEEQLEPTEIKVDNQSAVAIAKNPVFHGKTKHFKMKFHFVREVEKTGEVSLVHCSSQDQLADILTKPL 544
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A1U8KW07_GOSHI (uncharacterized protein LOC107921232 n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8KW07_GOSHI) HSP 1 Score: 174 bits (441), Expect = 1.160e-47 Identity = 98/299 (32.78%), Postives = 166/299 (55.52%), Query Frame = 1 Query: 22 VWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGN-ELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAELTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 V++L ALYGL+Q+PR W + +L+SLGF+RS E LYV++E +L+V++YVDDL+V+G +++DFK + ++++D ++T LG++V+ + +L Q +F LS F ++ +TPM + L+ + E + + YRS+VG L ++ TRP++ F V L Q + + + ST EAEY+A ++V +WLR +L DL Q+E T + DN + + A +LV + +HF + H+ ++ + + + Q+ADIF KA N F Sbjct: 124 VYRLKNALYGLKQAPRAWCARIDSYLVSLGFERSISEPTLYVKKEQAETQLIVSLYVDDLLVTGGDRIILADFKAKMKYMFEMSDLGQMTYFLGMEVL--QTQSGIFLGQKTFAVKILSKFFMENCKPTSTPMAVGMKLSSQGDY--EQASESAYRSLVGCLLYLTA-TRPDIMFAVSMLSSAQSSKKQSI-----VAQSTAEAEYVATVNAVNQAIWLRKILVDLNLHQREATEIFCDNKSAVAIAKNLVFHGRTKHFSIKLHVVRKMEQAREVELIHCNSEKQIADIFIKAFNVSRF 412
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RPT4_CAJCA) HSP 1 Score: 181 bits (459), Expect = 1.220e-47 Identity = 110/363 (30.30%), Postives = 179/363 (49.31%), Query Frame = 1 Query: 16 NKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAE---------------------------------------------------------------LTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 +KV +L KALYGL+Q+PR W + + + + F + +E LY++ +G + L+V +YVDDL+ +G++P++ +FK+ + ++++TD + LGI+V + ++ +++Q S+ KD L F LD TPM+ + L+ + E D LY+S+VG+L ++ TRP++ + V + R P H + A+ +T ST EAEY+A S V +WLR+LL +L PQ EPT + DN + I A + V +++H YH +E +S ++M + KTHDQVADIFTK L E F Sbjct: 972 DKVLRLKKALYGLKQAPRAWNVRIDKYFKEVNFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEV--KQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVF 1329
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Match: Q2QRU2_ORYSJ (Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2QRU2_ORYSJ) HSP 1 Score: 181 bits (458), Expect = 1.680e-47 Identity = 103/310 (33.23%), Postives = 169/310 (54.52%), Query Frame = 1 Query: 10 YPNKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRREGGNELMVAIYVDDLVVSGSSPALVSDFKQSLASKYDLTDQWELTQILGIKVVWDKRDKCFYLSQISFIKDALSMFGLDYLPACATPMDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQCNPEAKHFEAAE--------LTTSTVEAEYLALRSSVKDIMWLRHLLADLGCPQQEPTPVVEDNSACIEWANDLVVSKKNRHFRVSYHLAKEQVSLGTIRMFFTKTHDQVADIFTKALNAENF 915 +PN V+KL+KALYGL+Q+PR WY L + LL+ F + L+V + G N+L V IYVDD++ S+ A+V DF +++ +++++ EL+ LG+++ + + ++ Q + KD L F ++ +TP+ T L P E D +YRSM+G+L ++ +RP++ F V R Q +P A H +A + + ST E+EY+A S I+WL L D G E P+ DN++ I A + V + +H + +H ++ V G + + F T Q+ADIFTK L++ F Sbjct: 1089 FPNHVFKLSKALYGLKQTPRAWYDRLKNFLLAKLFTMGNVDKTLFVLKHGDNQLFVQIYVDDIIFGCSTHAVVVDFAETMRREFEMSMMGELSYFLGLQI--KQTPQGTFVHQTKYTKDLLRRFNMENCKPISTPIGSTAVLDPDED--GEAVDQKVYRSMIGSLLYLTA-SRPDIQFAVCLCARFQASPRASHRQAVKRIMRKQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYGLTF-EKVPLFYDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNRF 1392 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig934.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig934.2.1 >prot_H-akashiwo_Contig934.2.1 ID=prot_H-akashiwo_Contig934.2.1|Name=mRNA_H-akashiwo_Contig934.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=305bp TSTYPNKVWKLNKALYGLRQSPRIWYMELHDHLLSLGFQRSGHESCLYVRback to top mRNA from alignment at H-akashiwo_Contig934:31737..32834+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig934.2.1 ID=mRNA_H-akashiwo_Contig934.2.1|Name=mRNA_H-akashiwo_Contig934.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1098bp|location=Sequence derived from alignment at H-akashiwo_Contig934:31737..32834+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig934:31737..32834+ >mRNA_H-akashiwo_Contig934.2.1 ID=mRNA_H-akashiwo_Contig934.2.1|Name=mRNA_H-akashiwo_Contig934.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=915bp|location=Sequence derived from alignment at H-akashiwo_Contig934:31737..32834+ (Heterosigma akashiwo CCMP452)back to top |