mRNA_H-akashiwo_Contig932.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A7S3Y6Z6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6Z6_HETAK) HSP 1 Score: 227 bits (578), Expect = 1.630e-71 Identity = 130/160 (81.25%), Postives = 132/160 (82.50%), Query Frame = 2 Query: 182 EPLGVP----SLATPSSPSARGPAARSWSIASVLS*TRWKKEPAVPSSWTASTLSTRVTGGGLSWTLSTRLTPSSSPSFSSSTADAAQSSIGGPMVPPTMSTVRREPCRATQPALSSFASVLRRVCSQSSPIFPPPLLCSP*WTTLPSSWTLMTPSRPSD 649 EPLGV SLAT SSPSARGPAARSWSIASV TRWKK PAVPS WTASTLSTRVT GGLSWTLSTRL+PSSSPSF SSTADAA S IGGPMV P +ST RREPCRA QP LSS ASV RR CS SSP FPPPL CSP WTTL SSWTLMTPSRPSD Sbjct: 1 EPLGVRVLVLSLATASSPSARGPAARSWSIASVPFSTRWKKVPAVPSFWTASTLSTRVTTGGLSWTLSTRLSPSSSPSFFSSTADAALSCIGGPMVLPALSTARREPCRAIQPVLSSSASVSRRACSLSSPSFPPPLFCSPSWTTLSSSWTLMTPSRPSD 160
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A7S4DD18_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD18_HETAK) HSP 1 Score: 205 bits (522), Expect = 2.120e-60 Identity = 96/137 (70.07%), Postives = 118/137 (86.13%), Query Frame = 1 Query: 499 DPAGPFLFCLGLKACLQSIESHLPPSAVVFSLMDNITILLDSDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVLRLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSLLDKI 909 DPAGPFLFCLGLKACL +IE+ LP SA++ SLMD+IT+LLDS+ A+EAF+ C+ ELK+KFNL+L+V+K K++PFGD+ PQFP+ +LDE V RLEGLE+ARNGAKLLGCP+GTDAFKQ+FFH KL EIQ LL KI Sbjct: 1 DPAGPFLFCLGLKACLDAIEAQLPASAIILSLMDDITVLLDSESALEAFKICQRELKSKFNLELNVMKSKVVPFGDTPAGPQFPEATLDEMRVCRLEGLEIARNGAKLLGCPIGTDAFKQSFFHAKLEEIQGLLHKI 137
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A7S3Y6Q2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6Q2_HETAK) HSP 1 Score: 153 bits (387), Expect = 3.510e-41 Identity = 72/105 (68.57%), Postives = 90/105 (85.71%), Query Frame = 1 Query: 595 MDNITILLDSDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVLRLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSLLDKI 909 MD+IT+LLDS+ A+EAF+ C+ ELK+KFNL+L+V+K K++PFGD+ PQFP+ +LDE V RLEGLE+ARNGAKLLGCP+GTDAFKQ+FFH KL EIQ LL KI Sbjct: 1 MDDITVLLDSESALEAFKICQRELKSKFNLELNVMKSKVVPFGDTPAGPQFPEATLDEMRVCRLEGLEIARNGAKLLGCPIGTDAFKQSFFHAKLEEIQGLLHKI 105
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4GD26_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GD26_VITBC) HSP 1 Score: 161 bits (408), Expect = 6.990e-41 Identity = 108/303 (35.64%), Postives = 150/303 (49.50%), Query Frame = 1 Query: 16 SFFNRILLGDLPEWCRSLLRFGRGFALAKPGGGVRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALL--LDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSIESHLPPSAVVFSLMDNITILLDSDDA---IEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVLRLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSLLDKI 909 S +R+L G++P+ C + L R FAL K GGVRPI + DV R VT+AV + + QFAVGT AG EK ++ + + + +L LDC NAFN+ DR+ I+D + +P FF QFYG + YR DG + S+EGT QGD AGPFLFCLGL L ++ P V + MD+I LD ++ + AE K + D S +A SP++ S D + G++ + G +LGCP+G D F Q + Q LLD I Sbjct: 467 SLVSRMLAGNMPDSCTTTLSAARLFALMKDNGGVRPIAMGDVLWRWVTKAVCMENKLAFEEDFSPLQFAVGTLAGGEKTFRACQTYMETRRDDSGRRVLVTLDCKNAFNSIDRQS-ILDELGIKWPSFVDFFWQFYGTPAELWYRMKDGRTETILSQEGTQQGDAAGPFLFCLGLHPALVKLQEEFPDD-FVSAFMDDIDGELDETRVTGYVDRAEQLLAEKKLRLRRDKS-----------AAWSPRWQQDS-DIPADIAASGVKCSTEGITVLGCPLGGDYFIQHSLEKITSSHQPLLDAI 755
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4G4F1_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G4F1_VITBC) HSP 1 Score: 157 bits (396), Expect = 3.100e-39 Identity = 105/298 (35.23%), Postives = 147/298 (49.33%), Query Frame = 1 Query: 28 RILLGDLPEWCRSLLRFGRGFALAKPGGGVRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALL-LDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSIESHLPPSAVVFSLMDNITILLDSDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVL---RLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSLLDKI 909 R+L LP+ LL AL K VRP+ V D RR VTRAV Y+ + Q AVGT AG+EKL F+ S EG L LDC NAFN DR+ ++ + Q +P+L F QFYG + YR ADG + S++GT QGDPAGPFLFCL L+ L++I++ P A++ + MD+IT D +A + EL+ I KL A P + D+ + +L EGL + G +LG +GTD + L + L++++ Sbjct: 567 RLLSAKLPQLVTKLLGTANLMALTKGPSKVRPVAVGDAVRRWVTRAVCMQYKNKMAAYFAPLQCAVGTPAGNEKLFKAAETFIQSRREGEKRLLTTLDCTNAFNEVDRQAIVNELASQ-FPELFHFLWQFYGEPAELWYRLADGRVRTILSQQGTQQGDPAGPFLFCLALQPVLKAIQASYP-RALIQAFMDDITPGADESEADGVVNKAEEELQT--------ISLKLARKKSKAYGPHWTDSEPPPDDLLPGFEREGL--SGEGIDILGGAIGTDGYVANKLQSVLDSHRPLIERL 852
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4GGY8_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGY8_9ALVE) HSP 1 Score: 155 bits (393), Expect = 3.970e-39 Identity = 108/296 (36.49%), Postives = 148/296 (50.00%), Query Frame = 1 Query: 40 GDLPEWCRSLLRFGRGFALAKP--GGGVRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALLLDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSI-----ESHLPPSAVVFSLMDNITILLDSDDA---IEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVLRLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSL 897 G+ P LL GR FAL K G VRPIT+ DV RR V +A+ YR + L Q+AV T AG++K+ + L L +D NAFN CDR++ MD + + +P+L FF +YG PI +R GT S+EG QGD AGP LFCLGLK L+ + E H + + MD+++++ S A A+ C E+ K+ L L++ K K ++A SP + + E RL GLEV+ G KL+G G D F F KL E L Sbjct: 238 GNAPPSLLRLLASGRFFALNKDTKGDKVRPITIGDVLRRWVIKAILIEYREKFEEHLSALQYAVRTSAGADKIFCAVQICLQLCPNSI--LLQIDANNAFNTCDRQKA-MDQLRKHFPELYRFFSLWYGTSIPIFFRDQKGTLRMFLSQEGIQQGDVAGPLLFCLGLKLALEKLQKRLHEKHGRAGCFIGAYMDDLSLIFPSSSADCLTSAWSDC-IEILGKYGLTLNLGKDK-----NAAFSPSWRGKTEREILQQRLPGLEVSTEGYKLMGAAGGGDTFVNTLFEKKLGEATKL 524
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4G029_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G029_VITBC) HSP 1 Score: 155 bits (393), Expect = 6.720e-39 Identity = 105/300 (35.00%), Postives = 145/300 (48.33%), Query Frame = 1 Query: 16 SFFNRILLGDLPEWCRSLLRFGRGFALAKPGGGVRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALL--LDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSIESHLPPSAVVFSLMDNITILLDSDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVLRLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSLLDKI 909 SF R+L G++P+ C + L R FAL K GGVR I V DV RR VT+AV + + QFAVGT AG EK+ ++ + + + +L LDC NAFN+ D + I+D + +P L FF QFYG + YR DG + ++EGT QGD AGPFLFCLGL L ++ P + + MD+I D ++ R R E C + P Q D S D + G++ + G +LGCP+G +F Q + Q LLD I Sbjct: 315 SFVGRMLAGNMPDSCTTTLSAARLFALMKDNGGVRLIAVGDVLRRWVTKAVCMENKLAFEEDFSPLQFAVGTSAGGEKIFQACQTYMETRHDDSDKRVLVTLDCKNAFNSSDGQ-AILDELGTKWPSLVDFFWQFYGSPAELWYRMEDGRIETILTQEGTQQGDAAGPFLFCLGLHPALVKLQGEFPDD-FISAFMDDI------DGGLDETRVTRQE-------------CCMKP-----RWQQDSDISAD----IAASGVKCSTEGITVLGCPLGGKSFIQHSLEKITSSHQPLLDAI 584
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4GUK7_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GUK7_VITBC) HSP 1 Score: 147 bits (371), Expect = 2.980e-36 Identity = 90/234 (38.46%), Postives = 126/234 (53.85%), Query Frame = 1 Query: 28 RILLGDLPEWCRSLLRFGRGFALAKPGGGVRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALL-LDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSIESHLPPSAVVFSLMDNITILLDSDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGD 726 R+L LP+ LL AL K G VRP+ V D RR VTRAV ++ + Q AVGT AG+EKL+ F+ S EG L+ LDC NAFN DR+ ++ + Q +P+L F QFYG + YR ADG + S++GT QG+PAGPFLFCL L+ L++I++ P A++ + M++IT D A + EL+ +L L+ K K + D Sbjct: 203 RLLSAKLPQLVTKLLDTANLVALTKGPGKVRPVAVGDAVRRWVTRAVCMQHKNKMAAYFAPLQCAVGTPAGNEKLLKAAETFIQSRREGEKKLLMGLDCTNAFNEVDRQAIVNELASQ-FPELFHFLWQFYGEPAKLWYRLADGRVRTILSQQGTQQGEPAGPFLFCLALQPVLKAIQASFP-RALIQAFMNDITPGADKSKADGVVDKAEEELQT-ISLKLARKKSKAIDLAD 433
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4FY66_VITBC (Reverse transcriptase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FY66_VITBC) HSP 1 Score: 146 bits (368), Expect = 1.380e-35 Identity = 101/298 (33.89%), Postives = 145/298 (48.66%), Query Frame = 1 Query: 28 RILLGDLPEWCRSLLRFGRGFALAKPGGGVRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALL-LDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSIESHLPPSAVVFSLMDNITILLDSDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVL---RLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSLLDKI 909 R+L L + LL AL K G VRP+ V D RR VTRAV ++ + Q AVGT AG+EKL F+ S EG L LDC NAFN DR+ ++ + Q +P+L F QFYG + YR ADG + S++GT QG+PAGPFLFCL L+ L++I++ P A++ + M++IT D A + EL+ I KL A P + D + +L EGL + G +LG + TD++ L + L++++ Sbjct: 181 RLLSAKLSQLVTKLLGTANLMALTKGPGKVRPVAVGDAVRRWVTRAVCMQHKNKMAAYFAPLQCAVGTPAGNEKLFKAAETFIQSRREGEKRLLTTLDCTNAFNEVDRQAIVNELASQ-FPELFHFLWQFYGEPAKLWYRLADGRVRTILSQQGTQQGEPAGPFLFCLALQPVLKAIQASFP-RALIQAFMNDITPGADKSKADGVVDKAEEELQT--------ISLKLARKKSKAYGPHWTDREPPPDDLLPGFEREGL--SSEGIDILGGAIWTDSYVANKLQSVLDSHRPLIERL 466
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Match: A0A0G4HVR7_9ALVE (Reverse transcriptase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HVR7_9ALVE) HSP 1 Score: 142 bits (359), Expect = 2.440e-34 Identity = 109/306 (35.62%), Postives = 145/306 (47.39%), Query Frame = 1 Query: 40 GDLPEWCRSLLRFGRGFALAKPGGG--VRPITVTDVFRRVVTRAVAFSYRATWCTFLGDTQFAVGTRAGSEKLVHCISAFLNSVEEGTCSALL-LDCVNAFNACDRRRVIMDAVHQAYPKLEPFFLQFYGGRCPILYRGADGTPHYVYSEEGTMQGDPAGPFLFCLGLKACLQSI-----ESHLPPSAVVFSLMDNITILLD------------SDDAIEAFRRCRAELKAKFNLDLSVIKCKLLPFGDSANSPQFPDTSLDEEGVLRLEGLEVARNGAKLLGCPMGTDAFKQAFFHDKLAEIQSL 897 GD P SLL GR FAL K G VRPI V DV RR TRA+ + + LG QFAV TRAG+EKL C+ L + SA+L LD NAFNACDR+ VI+D VH +P+L FF +YG +++R G + EEG QGD AGP LFC+GLK L + H V + MD+++++ D + A+R A L++ F L L P S +SP + + + G +L G GT ++ A F KL E + L Sbjct: 992 GDAPVGFISLLAGGRCFALNKNARGTEVRPIVVGDVLRRWTTRAILLEFGVQFERHLGPLQFAVRTRAGTEKLFRCVQTCL---QRSPSSAVLNLDVSNAFNACDRQ-VIIDQVHAHFPQLYSFFALWYGTPSDLVFRDQSGLLRRITCEEGVQQGDVAGPLLFCMGLKPSLDGLLGDLQAKHGGRGCFVGAFMDDVSMVFPLCPFQQIPTDGHDDSILHAWRVSAARLQS-FGLTLR-------PDKSSVHSPSWQGLRECPSAYPSPPRIIPSLAGFRLCGVASGTIEYQSAHFDKKLKEEREL 1285 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig932.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig932.1.1 >prot_H-akashiwo_Contig932.1.1 ID=prot_H-akashiwo_Contig932.1.1|Name=mRNA_H-akashiwo_Contig932.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=303bp MTHVYSFFNRILLGDLPEWCRSLLRFGRGFALAKPGGGVRPITVTDVFRRback to top mRNA from alignment at H-akashiwo_Contig932:113622..114530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig932.1.1 ID=mRNA_H-akashiwo_Contig932.1.1|Name=mRNA_H-akashiwo_Contig932.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=909bp|location=Sequence derived from alignment at H-akashiwo_Contig932:113622..114530- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig932:113622..114530- >mRNA_H-akashiwo_Contig932.1.1 ID=mRNA_H-akashiwo_Contig932.1.1|Name=mRNA_H-akashiwo_Contig932.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=909bp|location=Sequence derived from alignment at H-akashiwo_Contig932:113622..114530- (Heterosigma akashiwo CCMP452)back to top |