mRNA_H-akashiwo_Contig93.57.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A835ZC87_9STRA (SEP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC87_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.660e-28 Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKL 245 P VD+ P TTLQIR ADGRRLRARLNL+HT+R V A I +EGAG TP+VL+ G+PPA IT+F QT++AAGL GAQ+TQKL Sbjct: 185 PVVDDAQPVTTLQIRLADGRRLRARLNLSHTVRDVQAFIHSEGAGATPFVLLGGYPPAVITDFSQTLQAAGLAGAQLTQKL 265
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A7S2FCW2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FCW2_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.130e-27 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKLA 248 P VD+ P + +R +G+R+RA LN+ HTIRH+ A+I AEGAG PYVLM G+PPAQ+T+F QTIEAAGL GAQ+TQKLA Sbjct: 145 PVVDDAKPKAVIAVRLHNGKRIRATLNMNHTIRHLQALISAEGAGAAPYVLMSGYPPAQLTDFSQTIEAAGLNGAQVTQKLA 226
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: D7FR68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR68_ECTSI) HSP 1 Score: 102 bits (254), Expect = 4.480e-24 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKLA 248 P VD P+TTLQIR DGRR+RA+LN+ HT+RH+ AII EGAG Y+LM G+PPA +++ QT+E AGLKGA ITQKLA Sbjct: 183 PEVDASQPSTTLQIRLHDGRRVRAQLNMHHTVRHIQAIIAREGAGGGSYMLMAGYPPAPLSDSSQTLEQAGLKGASITQKLA 264
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: F0XZK1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK1_AURAN) HSP 1 Score: 94.7 bits (234), Expect = 1.180e-21 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKL 245 P VD+ AP TTLQIR A+G+R+RA LNL+HT+ H+ A ++ EG YVL+ GFPPA + + + T+EAAGLKGA +TQKL Sbjct: 123 PVVDDAAPKTTLQIRLANGKRIRATLNLSHTVGHLDAYVREEGGAGQAYVLLAGFPPAPLADPNATLEAAGLKGASVTQKL 203
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A7S2RQY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQY7_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.800e-21 Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 9 VDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKL 245 VDE PTTT+ +R G+R+R +LN TH + ++A IK EGA YVL GFPPAQITNFDQT+E AGL GAQITQ L Sbjct: 214 VDESKPTTTIALRLHTGKRIRLKLNATHRVGALVAAIKREGADGVSYVLQSGFPPAQITNFDQTLEEAGLTGAQITQTL 292
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A2D4BXI6_PYTIN (Peroxin-1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXI6_PYTIN) HSP 1 Score: 96.3 bits (238), Expect = 1.410e-20 Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQI-TNFDQTIEAAGLKGAQITQKL 245 P VD+ PTTTLQIR +G RLR LNLTHT+R + AII GAG PY L+ GFPP + T DQTI+AAGLKGA +TQKL Sbjct: 1249 PVVDDKQPTTTLQIRLHNGTRLRETLNLTHTVRDLHAIIHLNGAGAQPYTLLAGFPPRPVSTQMDQTIDAAGLKGAAVTQKL 1330
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A7S2HE37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE37_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.090e-20 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKLA 248 P VDE P +Q+R G+R+R LN HTIRH+ A+I+AEGAG +PY LM G+PPA+IT+ +Q++ A L G Q+ QKLA Sbjct: 184 PVVDESQPKVVIQVRLHSGKRMRVTLNSHHTIRHIQALIQAEGAGASPYTLMAGYPPAKITDMNQSVGEAKLNGTQVVQKLA 265
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A5D6Y7H8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7H8_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 6.180e-20 Identity = 49/82 (59.76%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQIT-NFDQTIEAAGLKGAQITQKL 245 P VD+ PTTTLQ+R DG RLR LNL HTIR + AII+ GAG Y L+ GFPP ++ + QTIEAAGLKGA +TQKL Sbjct: 184 PVVDDKKPTTTLQLRLHDGTRLRETLNLDHTIRDLHAIIQLNGAGAAAYTLLAGFPPRPVSADLSQTIEAAGLKGASVTQKL 265
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A8K1FL41_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL41_PYTOL) HSP 1 Score: 90.9 bits (224), Expect = 1.260e-19 Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 3 PTVDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQI-TNFDQTIEAAGLKGAQITQKL 245 P +D+ PTTTLQIR +G RLR LNL HTIR + AII+ AG Y L+ GFPP I T+ DQTIEAAGLKGA +TQKL Sbjct: 186 PVIDDKKPTTTLQIRLHNGSRLRETLNLDHTIRDLHAIIQLNNAGGQSYTLLAGFPPQPISTHLDQTIEAAGLKGAAVTQKL 267
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Match: A0A1V9YFA5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFA5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.600e-18 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 9 VDEGAPTTTLQIRTADGRRLRARLNLTHTIRHVMAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKLA 248 VD PTT +QIR A+G RLR LN+THT+R + A++ EGAG Y+LM GFPP I + D T++ AGL GA ITQK A Sbjct: 180 VDTSKPTTVIQIRLANGGRLRETLNVTHTVRDIHAVLHREGAGTQAYILMAGFPPKPIVDMDATLQDAGLLGAAITQKWA 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig93.57.1 >prot_H-akashiwo_Contig93.57.1 ID=prot_H-akashiwo_Contig93.57.1|Name=mRNA_H-akashiwo_Contig93.57.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=48bp MAIIKAEGAGETPYVLMEGFPPAQITNFDQTIEAAGLKGAQITQKLA*back to top mRNA from alignment at H-akashiwo_Contig93:1641082..1646546+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig93.57.1 ID=mRNA_H-akashiwo_Contig93.57.1|Name=mRNA_H-akashiwo_Contig93.57.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5465bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1641082..1646546+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig93:1641082..1646546+ >mRNA_H-akashiwo_Contig93.57.1 ID=mRNA_H-akashiwo_Contig93.57.1|Name=mRNA_H-akashiwo_Contig93.57.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=144bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1641082..1646546+ (Heterosigma akashiwo CCMP452)back to top |