mRNA_H-akashiwo_Contig93.56.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A7S3XW60_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW60_HETAK) HSP 1 Score: 202 bits (513), Expect = 2.460e-65 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGGSGQAVLGGDGNSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGGSGQAVLGGDGNSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG Sbjct: 1 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGGSGQAVLGGDGNSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 104
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: D7FR68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR68_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 4.060e-19 Identity = 61/120 (50.83%), Postives = 73/120 (60.83%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGGA--SAKGGSGQAVLG-----------GDGNS-VEGIFNRA--AGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 MAN A L KKG EEEKK NA YAGGA + +GGSG V+G G+G+ V+ IF RA GP GG ++TITMY GFT+DDGPFR LDDP N+ FL+D+A G Sbjct: 1 MANFATLESLKKGDEEEKKG--NAYYAGGARGAGRGGSGLNVMGPPPDDXXXXXXGNGDPHVQEIFRRAETGGPPGEDGGNE-RTITITMYNGGFTVDDGPFRRLDDPANKDFLKDLASG 117
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A7S2RQY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQY7_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 7.040e-16 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGG-ASAKGGSGQAVLGGDGNSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 MA IAGL D K GE+E K N YAGG A GGSG V+G +G + + + + +GGE A V IT+YQ GF +DDGPFRS +DP NQ F++ M +G Sbjct: 47 MARIAGLKDLGKEGEDEDK---NKYYAGGNAQGGGGSGLNVIGPEGGAEDPYSGILSNAEPMSGGEEAERV-ITLYQGGFVVDDGPFRSFEDPANQQFIQQMNQG 147
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A835ZC87_9STRA (SEP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC87_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 7.230e-14 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 135 GGDGNSVEGIFNRAAGPQDAAGGE--AANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 GG G+ V+ IF RA+ + A GGE A + +TI MY+ GFT++DGPFR LDDP N+PFLRD+ +G Sbjct: 53 GGAGSPVQDIFQRASRQEAAEGGEEGADSQITIFMYRQGFTVNDGPFRRLDDPANEPFLRDLGKG 117
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A448ZPB0_9STRA (SEP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPB0_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.800e-13 Identity = 50/116 (43.10%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGG-SGQAV----------LGGDGNSVEGIFNRAAGPQDAAGG-EAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 M+NI GL D K +E D N Y GG A+GG SG AV G ++ + IF+ A A+GG + TITMY+DGF +DDGP+R LDDP N+ FL+ +ARG Sbjct: 1 MSNIRGLYDDK---NDESSDDENNRYVGGIGARGGGSGLAVEPNTADANPNANGPPSTSDSIFDLAEAAGSASGGGDGEVRRTITMYRDGFVVDDGPYRRLDDPANKEFLKSLARG 113
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: B7FUL9_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUL9_PHATC) HSP 1 Score: 66.2 bits (160), Expect = 8.210e-11 Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGGSGQAVL-----GGDGNSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 M+N+ GL KK + D++N G GGSG AV G D ++V G+ A A + TITMY+DGF +DDGP+R L+DPEN FLR +A G Sbjct: 1 MSNVHGLFSGKKDDSDSDDDANNRFVGGIGDRGGGSGLAVQPNMDEGPDRDAVFGLAENA-----TAEDSGQSRRTITMYRDGFVVDDGPYRRLEDPENAEFLRHLAMG 104
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: M4BRU2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRU2_HYAAE) HSP 1 Score: 64.3 bits (155), Expect = 4.990e-10 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSS--NALYAGGASAKGG-SGQAVLG-GDGNSVEGIFNRAAGPQDAAGGEAANSV--TITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 MANI GLS + ++E++DS N YAGGAS +GG SG +V+G + V I RA Q A EA+ IT Y+DGFT++DGP+R+ D N+ FL + +G Sbjct: 1 MANIVGLSSLRGRNDDERQDSDEPNQYYAGGASDRGGGSGLSVIGPASDDHVANIIGRA---QQDARSEASTQPRHVITFYRDGFTVNDGPYRTRSDVVNRLFLEALEQG 107
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A1Z5K441_FISSO (UBX domain-containing protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K441_FISSO) HSP 1 Score: 62.0 bits (149), Expect = 2.930e-9 Identity = 45/105 (42.86%), Postives = 54/105 (51.43%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGGSGQAVLGGDGNSVEGIFNRAAGPQDA-AGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 M+NI GL + N G GGSG AV + E IF+RA +DA A E TITMY+DGF +DDGP+R LDDP N FLR +A G Sbjct: 1 MSNIHGLFSGRNDXXXXXXXXXNRFVGGIGERGGGSGLAVR----PNPESIFSRA---EDATADDEGQVQRTITMYRDGFVVDDGPYRRLDDPSNGDFLRSLAMG 98
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A7S1YL29_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YL29_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.840e-8 Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 3 Query: 147 NSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 +++ G+ +A G+ TITMYQ GF +DDGP+R LDDPEN FLR +A G Sbjct: 61 DAIFGLAEQAGXXXXXXXGQGPPRRTITMYQSGFVVDDGPYRRLDDPENADFLRSLAMG 119
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Match: A0A6T7Z848_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z848_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 3.860e-8 Identity = 48/138 (34.78%), Postives = 61/138 (44.20%), Query Frame = 3 Query: 12 MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGG-SGQAVLG---------------------------------GDGNSVEGIFNRAAGPQDAAGGEAANSVTITMYQDGFTIDDGPFRSLDDPENQPFLRDMARG 323 MAN+ GL D K E+EK+ A YAGG GG SGQ +L G GN++ G + A P + TIT +Q+GFT+DDGP R DDPE+Q FL + RG Sbjct: 9 MANVRGLKDVKDEDEDEKRQ---AYYAGGQGQNGGGSGQEILDPREFMERARNEMGAQTHDEWRSQQPGAASSNFTGAGNTLSGDSVQGAAPPP----QQPTEHTITFWQNGFTVDDGPLRGKDDPESQAFLAAVNRG 139 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig93.56.1 >prot_H-akashiwo_Contig93.56.1 ID=prot_H-akashiwo_Contig93.56.1|Name=mRNA_H-akashiwo_Contig93.56.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=105bp MANIAGLSDFKKGGEEEKKDSSNALYAGGASAKGGSGQAVLGGDGNSVEGback to top mRNA from alignment at H-akashiwo_Contig93:1634907..1635563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig93.56.1 ID=mRNA_H-akashiwo_Contig93.56.1|Name=mRNA_H-akashiwo_Contig93.56.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=657bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1634907..1635563+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig93:1634907..1635563+ >mRNA_H-akashiwo_Contig93.56.1 ID=mRNA_H-akashiwo_Contig93.56.1|Name=mRNA_H-akashiwo_Contig93.56.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=315bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1634907..1635563+ (Heterosigma akashiwo CCMP452)back to top |