mRNA_H-akashiwo_Contig93.45.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK) HSP 1 Score: 239 bits (610), Expect = 3.830e-73 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1 Query: 1 NFIGGCHHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVREEGGLTSDSDDLMEKLRSQQSVKINLGLYQFLDYVMTEISSAHKEDENFRKEASVFVI 354 NFIGGCHHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVREEGGLT DSDDLMEKLRSQQSVKINLGLYQFLDYVMTEISSAHKEDENFRKEASVFVI Sbjct: 585 NFIGGCHHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVREEGGLTPDSDDLMEKLRSQQSVKINLGLYQFLDYVMTEISSAHKEDENFRKEASVFVI 702
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A7S4D459_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D459_HETAK) HSP 1 Score: 167 bits (423), Expect = 4.980e-49 Identity = 76/120 (63.33%), Postives = 100/120 (83.33%), Query Frame = 1 Query: 1 NFIGGCHHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVREEGGLT--SDSDDLMEKLRSQQSVKINLGLYQFLDYVMTEISSAHKEDENFRKEASVFVI 354 NFIGGCHHLR+EVGRW+RVP ARVCRLCDSGS+EDE+H+LLSC HFSDQRE M++ ++R+EG + ++ D L+E LRSQ ++K+ LGLY ++++M +ISSAHKED FRK ASVF++ Sbjct: 192 NFIGGCHHLRVEVGRWHRVPGPARVCRLCDSGSVEDEMHVLLSCHHFSDQREAMLLSVIRQEGYVAEINNDDALLEILRSQINLKVTLGLYNLMNFIMRDISSAHKEDVIFRKAASVFIL 311
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A7S4DBC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBC8_HETAK) HSP 1 Score: 74.7 bits (182), Expect = 2.730e-13 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 1 NFIGGCHHLRIEVGRWYRVPASARVCRLCDS--GSLEDELHILLSCPHFSDQREEMIMKL 174 F+GGCHHLR+EVGRW RVP RVCR+C S G +EDE H+L C F+ +R ++ ++ Sbjct: 326 KFLGGCHHLRVEVGRWARVPREFRVCRMCGSEEGLVEDEEHVLFQCERFAAERHSLMSEV 385
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A8B6F3B6_MYTGA (Reverse transcriptase domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6F3B6_MYTGA) HSP 1 Score: 58.5 bits (140), Expect = 1.450e-7 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 1 Query: 13 GCHHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKL 174 G L IE GR+ +P + R+C+LC+SGS+EDE H L+ C ++D R ++ +L Sbjct: 468 GTFPLEIEQGRYRNIPPNLRICKLCNSGSIEDETHFLIYCDRYTDARNRLLREL 521
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A6S7HUA2_PARCT (Uncharacterized protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HUA2_PARCT) HSP 1 Score: 57.0 bits (136), Expect = 1.690e-7 Identity = 30/88 (34.09%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 19 HHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVR---EEGGLTSD--SDDLMEKLRSQQSVKINLGLY 267 H+L+IE+GR+ + R+C++C+SG +E+E+H+LLSC + R + L +E L S S DLM+ S+ +K++ +Y Sbjct: 85 HNLQIEIGRYQNILREERLCKICNSGEVENEIHLLLSCKAYEQSRANLRSSLENASSDEINLNSQTLSADLMKSTDSEIIIKLSKFVY 172
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A7D9HTN7_PARCT (Uncharacterized protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HTN7_PARCT) HSP 1 Score: 57.8 bits (138), Expect = 2.520e-7 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 19 HHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVR---EEGGLTSD--SDDLMEKLRSQQSVKINLGLY 267 H L+IE+GR+ +P R+C++C+SG +E+E H+LLSC + R + L +E L S S DLM+ S+ K++ +Y Sbjct: 281 HDLQIEIGRYQNIPREERLCKICNSGEVENETHLLLSCKAYEQSRANLRSSLENASSDEINLNSQTLSADLMKSTDSEIITKLSKFVY 368
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A8H8XKJ8_9GAMM (Reverse transcriptase domain-containing protein n=4 Tax=Bathymodiolus brooksi thiotrophic gill symbiont TaxID=1052209 RepID=A0A8H8XKJ8_9GAMM) HSP 1 Score: 57.8 bits (138), Expect = 2.820e-7 Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 19 HHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEM 162 H L IE GR+ +P R+C CDSG +EDE+H LL C F ++R+++ Sbjct: 829 HRLHIETGRYQGIPPHQRLCEQCDSGEVEDEIHFLLCCSKFREERQQL 876
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A7D9I838_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I838_PARCT) HSP 1 Score: 57.0 bits (136), Expect = 3.660e-7 Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 19 HHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVR---EEGGLTSD--SDDLMEKLRSQQSVKINLGLY 267 H+L+IE+GR+ +P R+C++C+SG +E+E H+LLSC + R + L +E L S S DLM+ + K++ +Y Sbjct: 172 HNLQIEIGRYQNIPREERLCKICNSGEVENETHLLLSCKAYEQSRANLRSSLENASSDEINLNSQTLSADLMKSTDGEIITKLSKVVY 259
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A6S7I5L0_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I5L0_PARCT) HSP 1 Score: 57.4 bits (137), Expect = 3.910e-7 Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 1 Query: 19 HHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEMIMKLVR---EEGGLTSD--SDDLMEKLRSQQSVKINLGLY 267 H L+IE+GR+ +P R+C++C+SG +E E H+LLSC + R + L +E L S S DLM+ S+ K++ +Y Sbjct: 1068 HDLQIEIGRYQNIPREERLCKICNSGEVESETHLLLSCKAYEQSRANLRSSLENASSDEINLNSQTLSADLMKSTDSEIITKLSKFVY 1155
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Match: A0A6S7IUF0_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IUF0_PARCT) HSP 1 Score: 56.2 bits (134), Expect = 9.920e-7 Identity = 31/104 (29.81%), Postives = 51/104 (49.04%), Query Frame = 1 Query: 19 HHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQREEM--IMKLVREEGGLTSDSDDLMEKLRSQQSVKINLGLYQFLDYVMTEISSAHKEDEN 324 H L IE GR+ +P R+C+LC+SG +EDE H+ +C + R I+K + + L+E L S + + +F+ +TE ++ K EN Sbjct: 1068 HKLEIEYGRYKNIPREQRLCKLCNSGEVEDEFHVAFACKTYETLRNNTNDILKDFFQLSTTSQTKQKLLEHLMSSNDIVLINLFSKFISLCLTERENSLKPMEN 1171 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig93.45.1 >prot_H-akashiwo_Contig93.45.1 ID=prot_H-akashiwo_Contig93.45.1|Name=mRNA_H-akashiwo_Contig93.45.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=119bp NFIGGCHHLRIEVGRWYRVPASARVCRLCDSGSLEDELHILLSCPHFSDQback to top mRNA from alignment at H-akashiwo_Contig93:1413479..1413835+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig93.45.1 ID=mRNA_H-akashiwo_Contig93.45.1|Name=mRNA_H-akashiwo_Contig93.45.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=357bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1413479..1413835+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig93:1413479..1413835+ >mRNA_H-akashiwo_Contig93.45.1 ID=mRNA_H-akashiwo_Contig93.45.1|Name=mRNA_H-akashiwo_Contig93.45.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=357bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1413479..1413835+ (Heterosigma akashiwo CCMP452)back to top |