mRNA_H-akashiwo_Contig93.19.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S3YHN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHN7_HETAK) HSP 1 Score: 227 bits (578), Expect = 1.010e-72 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1 Query: 1 MSASSTPFSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQVEGNGLSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 342 MSASSTPFSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQVEGNGLSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA Sbjct: 119 MSASSTPFSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQVEGNGLSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 232
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A6V1WW05_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WW05_HETAK) HSP 1 Score: 108 bits (271), Expect = 2.580e-25 Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 1 Query: 13 STPFSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQVEGNGL---SVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 342 ST ++W I DE+ EV SEV VFTSAG FYTI V+ + S KVICKYVRRE+RSL+ +DK F NAL+IF+T +EEGK +YG DFFNY+D + +HL+ Sbjct: 136 STSYTWTITDESG---EVFFQSEGFQSEVPVVFTSAGQFYTISVQDSASPPSSTTHKVICKYVRREVRSLSYEDKEIFRNALRIFYTTPTEEGKAIYGSDFFNYRDASILHLS 245
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A6V1TY89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TY89_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 1.940e-21 Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 91 SEVSAVFTSAGSFYTIQVEGNG------LSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 342 SEVS +FT AG FYTI+ + N L++ KVICKYVRRE+R+L+ +D+ F +AL+IFHT+ + EGK YG DFFNY+D + +HLA Sbjct: 1 SEVSVIFTVAGQFYTIEAKDNSTSQSSSLTITQKVICKYVRRELRALHYEDREKFRHALRIFHTMPTVEGKAEYGVDFFNYRDSSMLHLA 90
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S3XY60_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY60_HETAK) HSP 1 Score: 91.7 bits (226), Expect = 3.080e-19 Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 13 STPFSWEI-LDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQVE-----GNGLSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 342 ST W + LDEN P E ++ S V A+FT G FY + +E GN + KVICKYVRREIRSL+++D+ + +AL+ +H + EEG++LYG F N +DLT HLA Sbjct: 148 STKHQWTVFLDEN--PHEHVEIEDNGQSVVQAMFTKPGRFYHVHIEESDSNGNTNVFKYKVICKYVRREIRSLHEEDREKYFSALEAYHRLSMEEGQQLYGMTFHNAKDLTIRHLA 261
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S2BBP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBP0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.960e-11 Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 1 Query: 109 FTSAGSFYTIQVEGNGLSVQTKVI---------CKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHL 339 F G Y I V L + KV CKYVRREIR LN+DD+ + A+K+ D +GK +YG++F N Q +T HL Sbjct: 3 FNKPGKEYWISVTEESLDTEDKVHTRTYTASVQCKYVRREIRRLNEDDRREYFEAMKVIAHTDMVKGKHVYGDEFVNLQYMTKKHL 88
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S2WC22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC22_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.810e-10 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 40 DENNNPLEVTSLDATLSSE---VSAVFTSAGSFYTIQV----EGNGLSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMH 336 D + PL T+ D L+S + VF + G+ Y++ + +G L V+ +V C YVRRE+RS+++DD+ F++ALK+ I +EEGK +G ++ N+H Sbjct: 103 DTSEAPLAYTAEDFGLASSGIGATVVFPAPGT-YSVDLRCHEDGESLQVEEEVACLYVRRELRSISEDDRERFMSALKLMDEIQNEEGKSQFGGHYYTLDYFANIH 207
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 6.300e-10 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 121 GSFYTIQVEG---NGLSV---QTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 342 G+ Y + VE NG + +KV CKYVRREIR L D D+ FL+A+ I++T+ ++ GK YG F NYQ +T H A Sbjct: 107 GTAYFLSVESVDENGRVITEGNSKVSCKYVRREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNA 186
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S2B6E8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6E8_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 6.390e-10 Identity = 40/118 (33.90%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 4 SASSTPFSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQV-----EGNGLSVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHLA 342 +AS + W IL ++ T SEV+AVF A +Y I V +G ++ + ICKYVRRE+RSL++ D++ + +AL+ H + EG+ YG F N + HL+ Sbjct: 174 TASGSEIEWSILYTRMQKEHSINVAGT-GSEVTAVFPHAAQWYNITVREIRQDGKVITARFSSICKYVRRELRSLSNRDRNRYFSALEKIHRLPLSEGQAKYGAKFANQEVFLVKHLS 290
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S4DBJ4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBJ4_HETAK) HSP 1 Score: 64.7 bits (156), Expect = 8.640e-10 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 22 FSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSF---YTIQVEGNGL--SVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHL 339 F+WE+ D + L+ ++D T FTS G TI +G + +++V+ KYVRREIRSL D+D+ L+A++ +D E G+ LYGE++ + Q + HL Sbjct: 143 FTWEV-DGESQDLKANAIDVT--------FTSTGPKTVKLTIADSSSGTVGTYESEVVVKYVRREIRSLTDEDRKRTLDAIETIFRVDQETGEHLYGENYRSIQSFSEEHL 244
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Match: A0A7S3Y3R6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3R6_HETAK) HSP 1 Score: 63.5 bits (153), Expect = 2.140e-9 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 22 FSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSF---YTIQVEGNGL--SVQTKVICKYVRREIRSLNDDDKSNFLNALKIFHTIDSEEGKRLYGEDFFNYQDLTNMHL 339 F+WE+ D L+ ++D T FTS G TI +G + +++V+ KYVRREIRSL D+D+ L+A++ +D E G+ LYGE++ + Q + HL Sbjct: 129 FTWEV-DGEAQDLKANTIDVT--------FTSTGPKTVKLTIADSSSGTVGTYESEVVVKYVRREIRSLTDEDRKRTLDAIETIFRVDQETGEHLYGENYRSIQSFSEEHL 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig93.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig93.19.1 >prot_H-akashiwo_Contig93.19.1 ID=prot_H-akashiwo_Contig93.19.1|Name=mRNA_H-akashiwo_Contig93.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=114bp MSASSTPFSWEILDENNNPLEVTSLDATLSSEVSAVFTSAGSFYTIQVEGback to top mRNA from alignment at H-akashiwo_Contig93:709513..710363+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig93.19.1 ID=mRNA_H-akashiwo_Contig93.19.1|Name=mRNA_H-akashiwo_Contig93.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=851bp|location=Sequence derived from alignment at H-akashiwo_Contig93:709513..710363+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig93:709513..710363+ >mRNA_H-akashiwo_Contig93.19.1 ID=mRNA_H-akashiwo_Contig93.19.1|Name=mRNA_H-akashiwo_Contig93.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig93:709513..710363+ (Heterosigma akashiwo CCMP452)back to top |