mRNA_H-akashiwo_Contig923.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig923.3.1
Unique NamemRNA_H-akashiwo_Contig923.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK)

HSP 1 Score: 542 bits (1397), Expect = 3.980e-185
Identity = 279/377 (74.01%), Postives = 314/377 (83.29%), Query Frame = 1
Query:   16 KSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSP-ENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            KSVGPDGVSPRVLK CA QL  PLTRLFQK+GK+ EFP SWKVARVTPV+KK+DA+LP+NYRPISVLPTLATTFERVLM QL+SFL  HIP NQFGFLP TG +DVGVILAD+IS ALEARKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFVVANG  S  +SIKSGV QGAIWSPLLFDLF+RNVPQRVREALCLFYADDLTL K +DR   AAQ A  ELN DL+RL+ FGKEWLLEFE TKS  L I+NS  ++ K  H P  MGG  V+E+E LE LGF +D +GNWS  A+A A  AR+RLGA+RR+A +LDD    M YK FVRSKIEYG+L+YWGAA+G+L  LD +Q SA
Sbjct:  327 KSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTISNSKGKDLKGRHIPCRMGGHEVKEQEVLEILGFLVDNKGNWSKFAEATASAARQRLGALRRLAPLLDDDCINMVYKTFVRSKIEYGSLVYWGAADGHLRDLDAIQRSA 703          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK)

HSP 1 Score: 489 bits (1258), Expect = 4.300e-170
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 1
Query:  394 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGV QGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNS ENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHA+AVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA
Sbjct:    1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 250          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK)

HSP 1 Score: 478 bits (1229), Expect = 1.280e-167
Identity = 244/260 (93.85%), Postives = 250/260 (96.15%), Query Frame = 1
Query:  373 ARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGG---VIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            ARKDVRLV LDFKGA DKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGV QGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITN   ++KVTHPPL MGG   +++EEKEQLEALGFTIDPRGNWSLHA+AVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA
Sbjct:    1 ARKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNLVADNKVTHPPLPMGGGVVMVIEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 260          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK)

HSP 1 Score: 347 bits (889), Expect = 5.260e-111
Identity = 197/328 (60.06%), Postives = 232/328 (70.73%), Query Frame = 1
Query:   16 KSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGD----SSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQ-KDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGF-TIDPRGNWSLHAKAVAKEARK 981
            KSVGPDGVSPRVLK CA QL  PLTRLFQK+GK+ EFP SWKVARVTPVYKK+DASLP+NYRPISVLPTLATTFERVLM QL+SFL  HIP NQFGFLP TG +DVGVILAD+IS ALEARKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYL  +    +  G+     +S   I+       +  PL    F+RNV QRVR+ALCLFY +DLTL  K + R   AAQ    +L+ DL+RL+ FGKEWLLE E +                    L +G   V+E++ LE LGF   + +G WS  +K+ A  AR+
Sbjct:  327 KSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPL----FVRNVRQRVRKALCLFYVNDLTLLLKVIGRNNEAAQNVQWDLSQDLKRLFCFGKEWLLELEAS--------------------LGIGEHEVKEQKVLEILGFFNENNKGTWSQFSKSTATAARE 628          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A0P4VTV9_SCYOL (Reverse transcriptase domain-containing protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VTV9_SCYOL)

HSP 1 Score: 243 bits (621), Expect = 2.040e-70
Identity = 139/379 (36.68%), Postives = 215/379 (56.73%), Query Frame = 1
Query:   13 RKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            +K+ GPD +SP VLK CAR+LA PLT +F        +P  WK ARV PV+K+   S P+NYRPIS+L  +   FERV+   +   L  +  +   QFGF P     D+ ++L      AL+   D  +VALD  GAFD+VW  GLL  L A G++    +L+  YL  R L VV NG +S  + +++ V QG++  P+L+++++ ++ +++       YADD TL     R E    RAAEE+N  L  + E+G  W + F P K+Q ++++ SP         LS GG+ +E +E ++ LG  +D    +  H K +A +A  R+ ++RR+A++LD R +++ YKA +R  +EY  L +   A  ++ KLD +Q  A
Sbjct:  226 QKATGPDNISPHVLKQCARELAVPLTTVFSACLWENTWPLVWKEARVVPVHKRSSRSDPKNYRPISLLSVVGKVFERVVADVVCRHLQDNYLLSDQQFGFRPGRSTSDLLMLLTGGWQDALDGGLDSVVVALDIAGAFDRVWHGGLLEKLRAKGIQGDLLQLLGDYLQGRTLQVVVNGQASESLPVRASVPQGSVLGPVLWNIYVDDLLRQLPAVSA--YADDCTLSCTYPRHESV--RAAEEINQQLGVIQEWGARWQVTFAPEKTQAMVVSRSPAAEPAVEGGLSFGGLPLELQESVKILGVEVDRGLRFDRHVKHIALKASHRVSSLRRVANLLDRRGRLLLYKAQIRPYLEYAALSWMSCAATHISKLDGIQRRA 600          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL)

HSP 1 Score: 242 bits (617), Expect = 1.110e-67
Identity = 140/382 (36.65%), Postives = 219/382 (57.33%), Query Frame = 1
Query:   16 KSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPN------QFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            K+ GPD VSPR+LKHCAR+L+ PLT +F    +  ++P  WK ARV PV+KK   S P NYRPIS+L  +    E+++    ++ ++ H+  N      QFGF P     D+ +I++     ALE   D  +VALD  GAFD+VW  GL+  L A G++     L++ YL  R L VV NG +S  + I++ V QG++  P+L++++I ++ +++   L   YADD +L +   R +  +QRA  ELN  L+ + E+G+ W + F P K+Q ++I+ SP         L  G   +  +E ++ LG T+D    +  H  AVA +  +R+ A+RR++  LD R  +  YKA +R  +EY  L +  +A  +L++LD VQ  A
Sbjct:  381 KATGPDDVSPRLLKHCARELSAPLTTVFTSCLREKKWPSVWKEARVVPVHKKNSRSEPNNYRPISLLSVMGKLLEKIV----AAAIYQHLSENHLLSDRQFGFRPGRSTADLLLIISKDWQDALEEGLDTLVVALDIAGAFDRVWHAGLVKKLCAKGIQGNLLALLEDYLQGRTLRVVINGQASQPLPIQASVPQGSVLGPILWNIYIDDLLRQIPTLLA--YADDCSLSRSYCRSD--SQRAVRELNRQLRLVMEWGEAWQVSFAPEKTQAMVISRSPAASPAVSGCLFFGDQTLPLQEHVKLLGVTVDCGLRFDRHVAAVAHQVSQRVSALRRMSGNLDSRGILTLYKAQIRPCMEYSALSWMSSAPTHLQRLDAVQRRA 754          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A0P4VVV8_SCYOL (Reverse transcriptase domain-containing protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VVV8_SCYOL)

HSP 1 Score: 238 bits (606), Expect = 5.730e-67
Identity = 140/379 (36.94%), Postives = 218/379 (57.52%), Query Frame = 1
Query:   13 RKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            +K+V P  +SPRVL+ CA +LARPL  LF     +  +P  WK + V P++KK   +  +NYRP+S+LP L+   E V+  +++  L  H  +   QFGF     A D+ ++L+   S AL+  K   +VALD +GAFDKVW   L   L A+GV     +L ++YL DR L V+ NG  S+   I++GV QG+   PLL+++++ ++   V  A    +ADD+TL      EE AA  A  ++N  L R+  +G++W ++F   K+Q+L I     N     P L+  G  +  ++++E LG T D +  +  H + +A+EA  +L ++RRI+++LD +   + YKA VRS +EY  L + GAA  +L  LD+VQ  A
Sbjct:  460 KKAVAPQDISPRVLRQCAAELARPLASLFNHCLSNATWPEMWKGSSVVPLHKKNAKTEAKNYRPVSLLPVLSKVLETVVASRVTRHLERHHLLSNRQFGFRQGRSAADLHLLLSTEWSGALDQGKTTAVVALDIEGAFDKVWHAALTTKLRAIGVDGALLQLFENYLRDRHLKVIINGRESNPQPIRAGVPQGSCLGPLLWNVYVNDLMHLVPTAKA--FADDITLSHSYGLEEEAA--ANHDINATLSRVAAWGRKWQVKFAAHKTQQLTI-----NRTSRAPRLTFNGETLTPRDEVEVLGVTYDRKLTFRTHVERLAREASGKLASLRRISYLLDAKGLELLYKAQVRSSLEYACLAWGGAANKHLALLDKVQDRA 829          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A8J9YR33_BRALA (Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YR33_BRALA)

HSP 1 Score: 231 bits (590), Expect = 3.260e-65
Identity = 142/382 (37.17%), Postives = 212/382 (55.50%), Query Frame = 1
Query:   16 KSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPN------QFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            K+ GPD +  RVLKH A +L+RPL +LFQ +      P+ WKVA V PV+KK     P NYRPIS+L  ++   E ++ K L    + HI  N      QFGF       D    +   +  A + R++ RL+ LD   AFD+VW RGL+A L A+GV     K  ++YL+DR L    +G +S+   I +GV QG+I  PLLF L+I ++ +++     L YADD ++ + ++R E A  RAA  LN DLQ++  +   W + F  +K + L  +N  ++ +  HP L+     + E ++ E LG TI    +W+ H K +A +A KRLG +RR A  L  + +   YK+ VRS +EY + ++ GA    L+ LD +Q  A
Sbjct:  350 KATGPDSIPARVLKHAAPELSRPLAKLFQLLLNKHHMPKQWKVAHVIPVHKKNSKHDPNNYRPISLLCIISKVMEAIINKAL----WQHIDKNSLISDKQFGFRAGHSTADALTYVTQHLHDAKDKRQESRLICLDISRAFDRVWHRGLIAKLKAIGVDGHVLKWFENYLADRELKATISGKTSTARLINAGVPQGSILGPLLFILYIDDLTEKLTNTAML-YADDSSIMRIMERRERA--RAALSLNTDLQKIQNWADCWNVLFGASKCKCLTASNL-KDAEGNHPELNFMNTTLAEVDEAELLGLTIRKELSWTHHIKKMATDAGKRLGLLRRAAPYLTPQQRATIYKSMVRSCMEYASTVWMGACPTSLDLLDAIQRRA 723          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A2H9T4U7_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T4U7_9ZZZZ)

HSP 1 Score: 227 bits (579), Expect = 9.960e-63
Identity = 136/381 (35.70%), Postives = 209/381 (54.86%), Query Frame = 1
Query:   16 KSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELII---TNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            K++GPD V+PR+LK     + +PL+ LF     SG FP  WK A VTPV+KK++ S+  NYRPIS+L  +    ER + K + +FL  H  + P+Q GF      V+  + +   I  AL+  K++R+V  D   AFD+VW +GLL+ L   G+R    K  ++YL +R   VV  G  S+   IK+GV QG+I  PLLF LFI ++ + +R  + LF ADD +L   +D    + + +A +LN DL++++E+   WL+ F PTK++ L+I   TNSP      HPPL M  +++ E      LG T+   G W+ H   +  +   +L  +RR    L   +    Y   +R   EYGN+++    +   + L+ +Q  A
Sbjct:  570 KAIGPDLVNPRLLKESVDIICKPLSTLFNLSLTSGIFPTEWKSANVTPVHKKENKSILTNYRPISLLSIVGKLMERCIFKYVHNFLHAHSLLSPHQSGFRHGDSPVNQLLAITHDIYSALDHGKEIRMVFCDISKAFDRVWHKGLLSKLSGFGIRGSLLKWFENYLYNRKQRVVIKGKFSNWSEIKAGVPQGSILGPLLFLLFINDIVKDIRANIKLF-ADDTSLYVIID----SPRISAVDLNFDLRKIHEWSVNWLVNFNPTKTETLLISKKTNSP-----IHPPLHMNNILLSEVSSHRHLGLTLSNNGGWTDHINLIISKVSPKLNILRRFKFTLGRTSLQTLYFTLIRPIFEYGNIVWDNLTKTQSDMLENLQLEA 940          
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Match: A0A8H9CHX6_9GAMM (Reverse transcriptase domain-containing protein n=3 Tax=Bathymodiolus brooksi thiotrophic gill symbiont TaxID=1052209 RepID=A0A8H9CHX6_9GAMM)

HSP 1 Score: 214 bits (546), Expect = 1.010e-59
Identity = 127/378 (33.60%), Postives = 204/378 (53.97%), Query Frame = 1
Query:   16 KSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGH--IPPNQFGFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA 1143
            K+ GPD ++PR+++  A  L  PL  LF     +  FP  WK+A VTPV+KK + S   NYRPIS++  L    ER + K + +FL  +  I P+Q GF P   A++  + L +    AL+  K++R+V  D   AFD+VW +GLL  L  +G++      +++YL+DR   VV     S   +IK+GV QG+I  PL F +FI ++   +  ++ LF ADD +L   VD      + +A  LN+D+  ++ +  +WL+ F P K++ + IT     +K  HPPL M   I+ +  + + LG  I   G+W  H   + K+A  R+  +R+   +LD +     Y  F+R  +EY ++++       + KL+ VQ  A
Sbjct:  109 KATGPDLINPRLVREGASILKLPLCLLFNLSLSTCRFPTQWKLANVTPVFKKDNPSKVNNYRPISLISVLGKVMERCIYKHVYNFLLKNSIITPHQSGFTPGDSAINQLLSLTNEFGKALDEGKEIRVVFCDISKAFDRVWHKGLLNKLENIGIQGSLLLWIKNYLTDRKQRVVIESAHSKWRTIKAGVPQGSILGPLFFIIFINDIVTEIHSSIKLF-ADDTSLYVIVDN----PRESAITLNNDMATIHAWSTKWLVNFNPQKTETMTITRKI--NKPLHPPLIMNNTIINQVTEHKHLGLDISNDGSWQKHIDLITKKAFIRVNILRKFKFILDRKTLEKIYLTFIRPILEYADVVWDNKTLFLINKLENVQIEA 479          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig923.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8N4_HETAK3.980e-18574.01Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8U8_HETAK4.300e-17098.80Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8J9_HETAK1.280e-16793.85Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8Z6_HETAK5.260e-11160.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0P4VTV9_SCYOL2.040e-7036.68Reverse transcriptase domain-containing protein n=... [more]
A0A0P4VX79_SCYOL1.110e-6736.65Uncharacterized protein n=1 Tax=Scylla olivacea Ta... [more]
A0A0P4VVV8_SCYOL5.730e-6736.94Reverse transcriptase domain-containing protein n=... [more]
A0A8J9YR33_BRALA3.260e-6537.17Hypp5830 protein n=1 Tax=Branchiostoma lanceolatum... [more]
A0A2H9T4U7_9ZZZZ9.960e-6335.70Reverse transcriptase domain-containing protein n=... [more]
A0A8H9CHX6_9GAMM1.010e-5933.60Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig923contigH-akashiwo_Contig923:160565..161707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog400682.PAC_15700156
PFAMsExo_endo_phos_2,RVT_1
Model size1143
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.37e-48
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,3APGY@33154|Opisthokonta
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size1143
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388044.3363285-CDS-H-akashiwo_Contig923:160564..1617071681388044.3363285-CDS-H-akashiwo_Contig923:160564..161707Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig923 160565..161707 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig923.3.1prot_H-akashiwo_Contig923.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig923 160565..161707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig923.3.1

>prot_H-akashiwo_Contig923.3.1 ID=prot_H-akashiwo_Contig923.3.1|Name=mRNA_H-akashiwo_Contig923.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=381bp
RWTWRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGKSGEFPRSWKVAR
VTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFGHIPPNQF
GFLPSTGAVDVGVILADRISLALEARKDVRLVALDFKGAFDKVWWRGLLA
HLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVQQGAIWSP
LLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDL
QRLYEFGKEWLLEFEPTKSQELIITNSPENHKVTHPPLSMGGVIVEEKEQ
LEALGFTIDPRGNWSLHAKAVAKEARKRLGAIRRIAHMLDDRAKMMAYKA
FVRSKIEYGNLIYWGAAEGYLEKLDRVQSSA
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mRNA from alignment at H-akashiwo_Contig923:160565..161707-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig923.3.1 ID=mRNA_H-akashiwo_Contig923.3.1|Name=mRNA_H-akashiwo_Contig923.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1143bp|location=Sequence derived from alignment at H-akashiwo_Contig923:160565..161707- (Heterosigma akashiwo CCMP452)
CGCTGGACGTGGCGCAAGTCGGTGGGCCCGGACGGAGTTAGCCCGCGGGT ACTGAAGCACTGCGCCCGGCAGCTGGCGCGCCCTCTCACTCGGCTTTTTC AGAAAGTGGGCAAATCTGGTGAGTTCCCCAGGAGCTGGAAGGTGGCAAGA GTCACCCCTGTCTACAAGAAGAAGGATGCCAGCCTCCCGGAGAACTACCG GCCGATCTCGGTGCTGCCCACTTTGGCCACCACGTTTGAGCGCGTTCTCA TGAAGCAGCTCAGCAGTTTTCTCTTCGGGCACATCCCGCCCAATCAGTTT GGCTTCCTACCTAGTACGGGGGCCGTGGATGTCGGCGTCATCCTCGCCGA CAGAATCTCCCTGGCCCTTGAAGCCAGGAAAGATGTGCGGTTGGTTGCGC TTGACTTCAAGGGTGCCTTTGATAAGGTGTGGTGGCGGGGCCTTCTTGCT CATCTCTGGGCGGTGGGTGTGCGCTCCAAGGCCTTCAAGCTGATGCAGAG CTACTTGTCAGACCGGGCCCTCTTTGTAGTGGCAAACGGTGACAGCTCCA GTCATATGAGCATCAAGTCTGGGGTGCAGCAGGGGGCCATCTGGTCGCCT CTCCTCTTTGACCTCTTCATTCGCAACGTCCCACAGCGAGTCAGGGAGGC TCTATGCCTCTTCTACGCAGATGACCTCACCCTCCAGAAGGATGTAGACA GGGAAGAGGGGGCGGCGCAGAGGGCGGCAGAGGAGCTGAACGATGATCTG CAGCGCCTCTATGAGTTTGGCAAGGAGTGGCTACTAGAGTTTGAACCTAC CAAGTCCCAGGAGCTGATCATCACCAACTCGCCTGAAAATCACAAGGTGA CTCACCCTCCTCTATCCATGGGGGGAGTGATTGTTGAAGAGAAGGAGCAG CTGGAGGCGCTGGGTTTCACCATCGATCCGCGAGGTAATTGGTCCCTACA TGCCAAGGCAGTAGCCAAGGAGGCCCGGAAGAGGCTTGGTGCCATTAGGA GGATCGCCCACATGCTGGATGATCGTGCCAAGATGATGGCCTACAAGGCT TTTGTACGATCAAAGATTGAGTACGGCAACCTCATCTACTGGGGGGCGGC CGAGGGCTATCTCGAAAAACTTGACAGGGTTCAAAGCAGTGCT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig923:160565..161707-

>mRNA_H-akashiwo_Contig923.3.1 ID=mRNA_H-akashiwo_Contig923.3.1|Name=mRNA_H-akashiwo_Contig923.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1143bp|location=Sequence derived from alignment at H-akashiwo_Contig923:160565..161707- (Heterosigma akashiwo CCMP452)
CGCTGGACGTGGCGCAAGTCGGTGGGCCCGGACGGAGTTAGCCCGCGGGT
ACTGAAGCACTGCGCCCGGCAGCTGGCGCGCCCTCTCACTCGGCTTTTTC
AGAAAGTGGGCAAATCTGGTGAGTTCCCCAGGAGCTGGAAGGTGGCAAGA
GTCACCCCTGTCTACAAGAAGAAGGATGCCAGCCTCCCGGAGAACTACCG
GCCGATCTCGGTGCTGCCCACTTTGGCCACCACGTTTGAGCGCGTTCTCA
TGAAGCAGCTCAGCAGTTTTCTCTTCGGGCACATCCCGCCCAATCAGTTT
GGCTTCCTACCTAGTACGGGGGCCGTGGATGTCGGCGTCATCCTCGCCGA
CAGAATCTCCCTGGCCCTTGAAGCCAGGAAAGATGTGCGGTTGGTTGCGC
TTGACTTCAAGGGTGCCTTTGATAAGGTGTGGTGGCGGGGCCTTCTTGCT
CATCTCTGGGCGGTGGGTGTGCGCTCCAAGGCCTTCAAGCTGATGCAGAG
CTACTTGTCAGACCGGGCCCTCTTTGTAGTGGCAAACGGTGACAGCTCCA
GTCATATGAGCATCAAGTCTGGGGTGCAGCAGGGGGCCATCTGGTCGCCT
CTCCTCTTTGACCTCTTCATTCGCAACGTCCCACAGCGAGTCAGGGAGGC
TCTATGCCTCTTCTACGCAGATGACCTCACCCTCCAGAAGGATGTAGACA
GGGAAGAGGGGGCGGCGCAGAGGGCGGCAGAGGAGCTGAACGATGATCTG
CAGCGCCTCTATGAGTTTGGCAAGGAGTGGCTACTAGAGTTTGAACCTAC
CAAGTCCCAGGAGCTGATCATCACCAACTCGCCTGAAAATCACAAGGTGA
CTCACCCTCCTCTATCCATGGGGGGAGTGATTGTTGAAGAGAAGGAGCAG
CTGGAGGCGCTGGGTTTCACCATCGATCCGCGAGGTAATTGGTCCCTACA
TGCCAAGGCAGTAGCCAAGGAGGCCCGGAAGAGGCTTGGTGCCATTAGGA
GGATCGCCCACATGCTGGATGATCGTGCCAAGATGATGGCCTACAAGGCT
TTTGTACGATCAAAGATTGAGTACGGCAACCTCATCTACTGGGGGGCGGC
CGAGGGCTATCTCGAAAAACTTGACAGGGTTCAAAGCAGTGCT
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