mRNA_H-akashiwo_Contig910.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A7S4DAJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAJ8_HETAK) HSP 1 Score: 198 bits (503), Expect = 2.770e-60 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 3 Query: 747 PTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVLRREGKKQDLLVRNAAALWGWARAAPGA 1052 PTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRT+FHGAHHQLRADRVLRREGKKQDLLVRNAAALWGWARAAPGA Sbjct: 1 PTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTIFHGAHHQLRADRVLRREGKKQDLLVRNAAALWGWARAAPGA 102
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A3M7L0C1_AUXPR (ABC transporter domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L0C1_AUXPR) HSP 1 Score: 213 bits (542), Expect = 2.210e-58 Identity = 132/282 (46.81%), Postives = 175/282 (62.06%), Query Frame = 3 Query: 213 QMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVLRREGKKQDLLVRNAAALWGWARAAPGAAR 1058 ++G+A ++ V S W++L + + IA +R V+QL++LG ILVPI A+ +V YLAFM+L+A EA ++ Y G+ V AS + + A V+RP PWY AQY IP++GM+LGNA S VA+GL L ++ GRDRVE LA GAT WEAA R A+R +TPTLNQM+V G+VSIPGMMTGQ+LGG DP AA+YQ+ ++ I A S A AA LA T+ GAH +LR DR+ R + +LV A W RA GAAR Sbjct: 635 RLGLAAAVILVNGLVSVWLRLAMHKKLAIATVRVVLQLSILGYILVPIFTANSAWVTAAYLAFMLLVAGLEALSRPALTYDGMLWQVLASLGLPCSAMLAYGLGAVIRPRPWYDAQYAIPVAGMLLGNACSGVAIGLTSLLDDLSSGRDRVEALLAAGATRWEAAEDGVRRAVRMALTPTLNQMNVAGIVSIPGMMTGQILGGADPTTAARYQIALLLFIAAASGAGAVAAVFLAAGTLLDGAH-RLRGDRLTPRGTTGKGVLVWLA---WQARRAGGGAAR 912
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A7C8D1N9_9BACT (Iron export ABC transporter permease subunit FetB n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D1N9_9BACT) HSP 1 Score: 193 bits (490), Expect = 4.580e-56 Identity = 111/245 (45.31%), Postives = 159/245 (64.90%), Query Frame = 3 Query: 198 DLSLVQMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVF 932 DLS +++G A L+ A S W+ L L A +RTVVQL+LLGV+LV + A + +V+ + M+L+AA+EA + YRGV+ H + S ++ + A L+V+RPDPW+ +Y+IP+ GM+LGN + +++GL + L + EGR VE +LA GAT WEAARP A+RAG+ P LN MSV+GLV+IPGMMTGQ+LGG+DP AA+YQ+++MFLI + L A R+ F Sbjct: 8 DLSALELGCAALLLLANGAVSVWLGLGLGSRLLWAGVRTVVQLSLLGVVLVFVFDAQEPLLVVGIGSLMLLMAAREAVRRAGRRYRGVYGHAFLSLMLASGVSILLATLVVLRPDPWWQPRYLIPLLGMVLGNGLTGISLGLDRCLLKFDEGRGEVEVWLAAGATPWEAARPTASEAIRAGLIPILNAMSVVGLVTIPGMMTGQILGGSDPSLAARYQILVMFLIAGVTAAGTTGCVLFAVRSAF 252
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A7S2AT94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT94_9STRA) HSP 1 Score: 189 bits (481), Expect = 8.980e-55 Identity = 110/247 (44.53%), Postives = 157/247 (63.56%), Query Frame = 3 Query: 267 MKLELAQSFGIACLRTVVQLALLGV-ILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVLRREGKKQDLLV 1004 M+L+L A +R VVQL +LG +LVPI A K ++V+ YL FM+++AAQEA+ + Y Y ++ H +A+ V ++ VV P PW+ QY+IP+ GM++GN+ SA+++ + +FL+ + + D VE L+ GAT WEA P FR A G+TP +N MSV+GLVSIPGMMTGQ+LGG +P AAKYQMMI+F+IC N +A VF H+LR + +R G K+D+LV Sbjct: 6 MRLQLEGRVITAAIRAVVQLLILGYCLLVPIFGAQKPWLVITYLGFMLIVAAQEASNRPAYRYAILYAHAFAAIAGSTTLVLTYSFCFVVIPSPWWEPQYLIPVGGMIIGNSISALSLAMDRFLSLLVQQHDCVELRLSLGATRWEAILPFFRRACVVGLTPNINSMSVVGLVSIPGMMTGQILGGQNPSDAAKYQMMILFVICTNGLGTMMIGLSIAVSHVFDD-DHRLRLHLISKRPGPKKDVLV 251
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A069PH21_9BURK (ABC transporter permease n=5 Tax=Caballeronia TaxID=1827195 RepID=A0A069PH21_9BURK) HSP 1 Score: 189 bits (481), Expect = 1.040e-54 Identity = 119/267 (44.57%), Postives = 159/267 (59.55%), Query Frame = 3 Query: 186 SDIKDLSLVQMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVLRREGK 986 S ++LSLV +G+A L+ V A S +KL L + A +RT+ QL L+G +L + D+ YVVLP +A M LIA A+ + R Y G AS VGA +V+R DPWY QY IP+ GM+LGN + V++G+ + E+ GR VE LA GAT WEAA+ R A+RAG+ PTLNQM+V+GLVS+PGMMTGQ+L G P A +YQ++IMFLI A S + A LL R +F H + V R +GK Sbjct: 2 SGYQNLSLVDIGLAAALIVVNGALSVALKLGLERKLAWAAVRTIAQLLLIGYVLGWVFEFDRWYVVLPLMALMTLIAGLAASNRGRRTYAGQRADSIASIWASGWLVGAFGLFVVIRIDPWYEPQYAIPILGMILGNTLTGVSLGIERMTEELTAGRGAVEMSLALGATRWEAAQGPARQAVRAGMIPTLNQMAVVGLVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTVGAVLLTYRRLFSPEHRFMAGKLVERTDGK 268
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A1F9KK74_9DELT (Iron export ABC transporter permease subunit FetB n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9KK74_9DELT) HSP 1 Score: 186 bits (471), Expect = 2.410e-53 Identity = 111/251 (44.22%), Postives = 160/251 (63.75%), Query Frame = 3 Query: 225 ALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVLRR 977 A L+A+ S W++L L + IA LRTVVQL LLG +LVPI A +++ M+ +AA+EA ++ Y G+ + + + + A A ++V +PW+ +Y+IP+ GM+LGN+ + +++GL + L E+ EGRDRVE LA GAT WEAARP ALR G+ P LN MSV+G+V+IPGMMTGQLLGG P AA+YQ++I+FLI A++ A LL R +F + H+LR D ++RR Sbjct: 9 AAALIAINGGLSLWLRLRLERRLLIASLRTVVQLLLLGYLLVPIFAWRNPFLIGATCLLMISLAAREAVRRVGRSYGGIGRNAFFALSLSATVTTLLAVTVLVGVEPWWEPRYLIPLLGMILGNSLTGISLGLDRCLAELDEGRDRVEAMLAFGATWWEAARPVAAEALRTGMIPILNTMSVVGIVTIPGMMTGQLLGGTPPDMAARYQILIIFLIAASTAAGGTLAILLTLRRLFD-SEHRLRHDLLVRR 258
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: R1CT75_EMIHU (ABC transporter domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CT75_EMIHU) HSP 1 Score: 191 bits (484), Expect = 2.550e-53 Identity = 136/295 (46.10%), Postives = 180/295 (61.02%), Query Frame = 3 Query: 198 DLSLVQMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRD-RVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVLRREGKKQ-DLLVRNAAALWGWARAAPGAARRLAATL 1076 DLS + A LV VV+A SA + L L ++ LRTV QL LG +L PI + ++ +VV+PY+A M+ AA+EA AK ++ YR + H + + T A L++RP PW+ AQ +IP+SGM+LGNA SA+++G+ +F+ + G +V LA GA+ EAA PA + L G+TPTLNQMSVIGLVSIPGMMTG +LGG P AAKYQMMIMF+I S A + LA ++ A L R RR G+K D+LV AAA+ G R AP AA AA L Sbjct: 12 DLSPSSLCAAGSLVLVVAATSAALGLRLEGKIAVSALRTVCQLLALGSLLYPIFSYNRPFVVIPYIALMVCFAAREAAAKPQHTYRQMAAHFGFALALALTTSFALCAGLILRPTPWWDAQIMIPVSGMLLGNAISALSLGVDRFVGLLCGGEGGQVRCLLACGASRVEAALPAAQGGLMTGLTPTLNQMSVIGLVSIPGMMTGTVLGGTPPLVAAKYQMMIMFVILFTSSAALATSIALAASSLLD-ARAFLHPHRAQRRAGRKHADILVAAAAAVAGCFREAPLAAGAEAALL 305
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A2E7M5H0_9DELT (Iron export ABC transporter permease subunit FetB n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7M5H0_9DELT) HSP 1 Score: 186 bits (471), Expect = 3.130e-53 Identity = 107/256 (41.80%), Postives = 163/256 (63.67%), Query Frame = 3 Query: 201 LSLVQMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRV 968 LS + + +A GLV + S W+ L L + +A +RTVVQL LLG IL+P+ + VV M+++A + A + YRG + + + L+GA +V +PW+ +Y+IP+ GM+LGN + +++GL + LT++ EGR RV+ YLA GA+ WEAARP A+R+G+ P LN M+V+GLV+IPGMMTGQ+LGG DP AA+YQ++IMFLI + + + A + LL+ R +F H+LR++R+ Sbjct: 8 LSALDLVLAAGLVVINGLLSLWLGLGLERKLFVASVRTVVQLLLLGWILMPVFTWNNQAVVFGICLAMVILATRAAVKRSSRSYRGAYRSSFVALLLGAGATALIGTWGIVGVEPWWQPRYLIPLLGMILGNGLTGISLGLDRCLTQLDEGRARVDVYLALGASRWEAARPVAADAMRSGMIPILNAMTVVGLVTIPGMMTGQILGGTDPAEAARYQILIMFLIASATAMGTALSVLLSLRALFDD-DHRLRSERI 262
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A0A6S7BFA2_9BURK (Putative iron export permease protein FetB n=1 Tax=Pararobbsia alpina TaxID=621374 RepID=A0A6S7BFA2_9BURK) HSP 1 Score: 186 bits (471), Expect = 3.320e-53 Identity = 113/262 (43.13%), Postives = 164/262 (62.60%), Query Frame = 3 Query: 186 SDIKDLSLVQMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQLRADRVL 971 S ++LSL+ + IA L+ V A S +KL+L + A +RTV QL L+G +L I A D+ YVVLP +A M LIA A+ + + YRG + AS + VGA +++R PWY AQY IP+ GM+LGN + V++G+ + E+ GR VE LA GAT WEAA+ A R A+RAG+ PTLNQM+V+G+VS+PGMMTGQ+L G P A +YQ+++MFL+ A++ + A +L +F H+ A+R++ Sbjct: 2 SGYQNLSLLDLAIAASLILVNGALSIALKLDLERKLAWAAVRTVAQLLLIGYLLDRIFAFDRWYVVLPVIAIMTLIAGLTASNRGKRTYRGQRVDSIASIWGSSWLVGAICLFVIIRVHPWYEAQYAIPLLGMILGNTLTGVSLGIERMTQELTAGRGLVEMSLALGATRWEAAQDAMRQAVRAGLIPTLNQMAVVGIVSLPGMMTGQVLAGQSPLQAVRYQIVVMFLLAASTGLGTVGAVMLTYLRLFT-PEHRFAAERLV 262
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Match: A2VQ43_9BURK (Uncharacterized protein n=369 Tax=Burkholderiaceae TaxID=119060 RepID=A2VQ43_9BURK) HSP 1 Score: 187 bits (474), Expect = 4.140e-53 Identity = 118/261 (45.21%), Postives = 159/261 (60.92%), Query Frame = 3 Query: 174 GCDSSD-IKDLSLVQMGIALGLVAVVSAASAWMKLELAQSFGIACLRTVVQLALLGVILVPIIAADKVYVVLPYLAFMMLIAAQEATAKMRYYYRGVFLHVYASFLVGAVTVGACAWLLVVRPDPWYSAQYVIPMSGMMLGNATSAVAVGLGQFLTEMHEGRDRVEHYLARGATAWEAARPAFRAALRAGVTPTLNQMSVIGLVSIPGMMTGQLLGGNDPGAAAKYQMMIMFLICANSFVVAAAAFLLATRTVFHGAHHQL 953 GC S ++DLSLV +GIA LVAV A SA + L L + +A +RTVVQL +G +L + YVVLP A M LIA + + YRG + AS + V A +V+R PW++ QY IP+ GM+LGN + V++G+ + + E+ RDRVE LA GAT WEAA+ A R A+RAG+ PTLNQM+V+G+VS+PGMMTGQ+L G P A +YQ++IMFLI A S + A L+ R +F H L Sbjct: 44 GCAMSPALQDLSLVDVGIAAALVAVNGAISAALSLGLGRKLALAAVRTVVQLLAIGYVLGWVFGHPHWYVVLPLTALMTLIAGFAGAGRGKRTYRGQRVDSIASIWFSSWFVAAVGLFVVIRIHPWFAPQYAIPILGMILGNTLTGVSLGVERMMEELTARRDRVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTVGAVLMTYRRLFSADHRFL 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig910.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig910.5.1 >prot_H-akashiwo_Contig910.5.1 ID=prot_H-akashiwo_Contig910.5.1|Name=mRNA_H-akashiwo_Contig910.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=338bp MDTFSKLARFFFRTLFQKETQSNSLGEQTSVWKDESDGCDSSDIKDLSLVback to top mRNA from alignment at H-akashiwo_Contig910:84546..85621+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig910.5.1 ID=mRNA_H-akashiwo_Contig910.5.1|Name=mRNA_H-akashiwo_Contig910.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1076bp|location=Sequence derived from alignment at H-akashiwo_Contig910:84546..85621+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig910:84546..85621+ >mRNA_H-akashiwo_Contig910.5.1 ID=mRNA_H-akashiwo_Contig910.5.1|Name=mRNA_H-akashiwo_Contig910.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1014bp|location=Sequence derived from alignment at H-akashiwo_Contig910:84546..85621+ (Heterosigma akashiwo CCMP452)back to top |