mRNA_H-akashiwo_Contig9.43.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig9.43.1
Unique NamemRNA_H-akashiwo_Contig9.43.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: A0A7S2V3H4_9STRA (Transaldolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3H4_9STRA)

HSP 1 Score: 210 bits (535), Expect = 5.010e-64
Identity = 111/234 (47.44%), Postives = 158/234 (67.52%), Query Frame = 1
Query:   43 ADIDLIKTLAESGLQDVTTNPSLVRIAAE--KYKGITGISLENCLVPDDLYELTAMEFGKEIL---KVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFAL-EGCDQLTIGPVLLKQL 726
            AD+  +KT+  S L+D+TTNPSL+  A++  +   +    ++    P+D YE  ++ FG E L   K    +VC Q+DIQNSDDTF+  F+A++LI+ Y+  GIPR+R++IK+A+TWEG++A +QLE EGI+CL+TL V E QG AAA+AGASM+ATYVGRV DWH   +     + + EDAGV +T  +    +  G +T+VMAASFRS +Q   L + C+ LTI P +LK L
Sbjct:    1 ADLKKLKTI--SNLRDITTNPSLIYAASQVSENSDLVDECIQQSSSPEDFYERVSVRFGVEALRQSKSPLSFVCTQVDIQNSDDTFLTLFQAKRLIDLYKQQGIPRERVLIKVAATWEGLQAVKQLESEGIKCLVTLVVCEAQGIAAAEAGASMLATYVGRVSDWHNASEDQ--SSESREDAGVLMTEAIARALKERGLKTEVMAASFRSTDQAARLAQSCEHLTIAPEILKDL 230          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: D8LMM8_ECTSI (Transaldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMM8_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 5.080e-63
Identity = 122/263 (46.39%), Postives = 164/263 (62.36%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAES-GLQDVTTNPSLVRIAAEKYKGITGISL------ENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQ-----------DPSLVGAPAE---EDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L ++++ + V  DTAD+  ++ L    GL DVTTNPS+V   A +  G  G  L             + +E  A++ G+ +L+VV G VC QLDI+ +D   M+  +AR L+ TY  +GIPR+R++IK  +TW GIRA E+LE+EGIRCL+TL  S VQG+AAA+AGAS+IATYVGRV DWH++             P    APA    ED GV LT  L+DY+  HG  T+VM ASFRS +QV AL GCD LTI P L+ ++
Sbjct:   81 LEQVQRRTTVWADTADLSTVEQLNHDLGLVDVTTNPSIVAATALQGAGSAGSLLVQTPSGSGAASKLESHERIAVDIGRRLLQVVPGRVCTQLDIRCTDAENMVK-KARGLVSTYSEAGIPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAASETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVSHGLPTEVMGASFRSADQVEALAGCDHLTIAPRLITEM 342          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: A0A8J2ET33_9DINO (Transaldolase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2ET33_9DINO)

HSP 1 Score: 199 bits (506), Expect = 3.810e-59
Identity = 115/255 (45.10%), Postives = 158/255 (61.96%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSL-------------VRIAAEKYKGITGISLENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L+ LKK ++VV DT DI  IK   E   +D TTNPSL             V+ A  K K   G       + D++ +  A+ FG EILKVV G+V  ++D   S DT     +AR++I+ Y+A+G P++RI+IKL STWE IRACE L+KEGIRC MTL  S  Q  A A+AGA++I+ +VGR+ DW ++ +P  V    E+D GV     + +YYR+H Y T VMAASFR+ +++  L GCD+LTIGP  L++L
Sbjct:   16 LSALKKMTSVVADTGDIGKIK---EYKPEDATTNPSLLLAACSMPEYEKIVKAAVTKGKESAGSHASKSALVDEICDQLAVHFGCEILKVVDGYVSTEVDANLSFDTNASLTKARKIIQMYKAAGFPKERILIKLGSTWECIRACEVLQKEGIRCNMTLLFSFCQAVACAEAGATLISPFVGRILDWFKKANPG-VDYSGEKDPGVISVKKIYEYYRQHKYDTIVMAASFRTKDEIACLAGCDKLTIGPKFLEEL 266          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: A0A536WMM0_9PROT (Transaldolase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WMM0_9PROT)

HSP 1 Score: 197 bits (500), Expect = 1.560e-58
Identity = 114/249 (45.78%), Postives = 155/249 (62.25%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAE--KYKGITGISLENC-----LVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L  L+  S VV DT DI+ +   A    QD TTNPSL+  AA+  +++ +   +++       L  D L+    + FG+EILK V+G V  ++D + S D      RA++LI  YE  G+PR+RI+IKLASTWEGIRA EQLE+EGI C MTL  S  Q  A ADAG ++I+ +VGR+ DW+R     +   P ++D GV     +  YY++HGY+TQVM ASFR  EQ+ AL GCD LTI P LL++L
Sbjct:    4 LESLRSQSLVVADTGDIEAV---ARWKPQDATTNPSLLLTAAQDPRFRHVVDAAIQEARGDTALAMDGLF----VHFGREILKHVAGRVSTEVDARLSFDKPGSIHRAQRLIGLYERHGVPRERILIKLASTWEGIRAAEQLEREGIHCNMTLLFSFAQALACADAGVTLISPFVGRIYDWYRAAR-KVDDIPVDDDPGVASVTKIYSYYKKHGYQTQVMGASFRKTEQILALAGCDLLTIAPELLEKL 244          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: A0A510XCH8_9GAMM (Transaldolase n=3 Tax=Halomonas TaxID=2745 RepID=A0A510XCH8_9GAMM)

HSP 1 Score: 196 bits (499), Expect = 1.860e-58
Identity = 108/244 (44.26%), Postives = 156/244 (63.93%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAEKYKGITGIS--LENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            LT+LK  + VV DT D++ I+       QD TTNPSL+  AA+  +    ++    +C   DD  +  A+E G EI  +V G+V  ++  + S DT     RARQLI+ YE  G+ R+RI+IK+A+TWEGIRA +QLE+EGI   +TL  S  Q +A ADAG ++I+ +VGR+ DWH+ ++P    A  ++D GVR    + ++Y+  GY+T VM ASFR+V ++ AL GCD+LTI P LL+QL
Sbjct:    6 LTQLKAMTTVVADTGDLEAIRRFQP---QDATTNPSLILQAAQSPERRARLAEIARHCTDIDDALDTVAVEIGSEIAALVPGYVSTEVSARLSFDTQATLDRARQLIDRYERHGVGRERILIKVAATWEGIRAAQQLEREGIHTNLTLLFSFAQAQACADAGVTLISPFVGRILDWHQAREPDADFA-GDQDPGVRSVRRIYEHYKGQGYKTVVMGASFRNVGEIEALAGCDKLTISPALLEQL 245          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: A0A521YIU6_9PROT (Transaldolase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YIU6_9PROT)

HSP 1 Score: 196 bits (499), Expect = 2.200e-58
Identity = 117/246 (47.56%), Postives = 153/246 (62.20%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAE--KYKGITGISLENCL--VPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L  L+K S VV DT DID +   A    QD TTNPSL+  +AE  +Y+     ++      +P  + EL  + FG EILK V+G V  ++D + S DT     +AR+  E YE +G+ R R++IKLASTWEGIRA E+LE+EGI C MTL  S  Q  A ADAG ++I+ +VGR+ DWH+ Q   L   P EED GV     + +YY++HGY+TQVM ASFR   Q+ AL GCD LTI P LL +L
Sbjct:    5 LESLRKYSLVVADTGDIDAV---ARWKPQDATTNPSLLLASAEDPRYQPFVESAVRQASGDIPAAM-ELLFVLFGTEILKHVAGRVSTEVDARLSFDTEKSIAKARRFAELYEKAGVSRSRVLIKLASTWEGIRAAEKLEREGIHCNMTLLFSFAQAVACADAGVTLISPFVGRIYDWHK-QARKLDDIPIEEDPGVASVTRIYNYYKQHGYKTQVMGASFRKTGQIVALAGCDLLTIAPDLLDKL 245          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: TAL1_PECAS (Transaldolase 1 n=80 Tax=Pectobacteriaceae TaxID=1903410 RepID=TAL1_PECAS)

HSP 1 Score: 196 bits (498), Expect = 2.940e-58
Identity = 114/254 (44.88%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAE------------KYKGITGISLENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L  LK+ + VV D+ DID I+  +    QD TTNPSL+  AA              Y  + G S E  L+  +  +  A+  G E+LK + G +  ++D + S D  M   +AR+LI  Y+   IPR RI+IKLA+TWEGIRA E+LEKEGI C +TL  S  Q RA A+AG  +I+ +VGR+ DW++E+ P+     AE D GV     + DYY+RH Y+T +M ASFR VEQ+ AL GCD+LTI P LL+QL
Sbjct:    4 LEALKQFTVVVADSGDIDSIRQFSP---QDATTNPSLILKAATLPQYQPLFDDAIAYANLQGGSPETRLI--NASDRLAVNIGAEVLKSIPGRISTEVDARLSFDRGMCVAKARKLIGMYQEKDIPRSRILIKLAATWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQEKQPTS-DYQAESDPGVISVRDIYDYYKRHRYQTVIMGASFRKVEQILALAGCDRLTISPALLEQL 251          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: A0A6G9I9Y8_9GAMM (Transaldolase n=1 Tax=Zophobihabitans entericus TaxID=1635327 RepID=A0A6G9I9Y8_9GAMM)

HSP 1 Score: 196 bits (498), Expect = 2.940e-58
Identity = 114/252 (45.24%), Postives = 153/252 (60.71%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAE--KYKGITGISLENCLVPDDLYEL--------TAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L  LKK + VV DT DID IK  A    +D TTNPSL+  AA+  +YK +   ++E+        E          A+  G EILK V G +  ++D + S D  M   +AR+LI  Y+ +GI + RI+IKLASTWEGI+A E+LEKEGI C +TL  S  Q RA A+AG  +I+ +VGR+ DW+  + P +    AE+D GV     + +YY+ HGY+T VM ASFR  EQ+ AL GCD+LTI P LL +L
Sbjct:    4 LDELKKYTVVVADTGDIDSIKQFAP---EDATTNPSLILKAAQLPQYKHLIDSAIESAKKQGGSKETQLINASDQVAVNIGAEILKHVPGRISTEVDARLSFDRGMCVAKARKLISLYQQAGIDKSRILIKLASTWEGIKAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYNTRQP-ITDYDAEKDPGVISVKSIYNYYKEHGYKTVVMGASFRKKEQILALAGCDRLTISPNLLNEL 251          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: UPI001C9829AC (transaldolase n=1 Tax=Cupriavidus sp. AU9028 TaxID=2871157 RepID=UPI001C9829AC)

HSP 1 Score: 194 bits (494), Expect = 1.210e-57
Identity = 112/249 (44.98%), Postives = 155/249 (62.25%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAEK--YKGIT--GISLENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEE---DAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            L +LK+ + VV DT D  L+K       QD TTNPSL+  A +K  Y+ +    +  ++    D + +   + FG EILK+V G V  ++D + S DT     +AR LI  YE  GI R+R++IK+ASTWEGIRA E L+++GIRC MTL  + VQ  A A+AGA +I+ +VGR+ DWHR+Q      A A     D GVR    +  YY+++GY T+VM ASFR+V+Q+ +L GCD LTI P LL+QL
Sbjct:    4 LEQLKQFTTVVADTGDFQLMKQYTP---QDATTNPSLILKAVQKAEYRPLLEQAVREQHGNGTDAVMDALLIAFGAEILKIVPGRVSTEVDARLSFDTDATVAKARHLIALYEQRGIARERVLIKIASTWEGIRAAEVLQRDGIRCNMTLLFALVQAAACAEAGAQLISPFVGRILDWHRKQAGDQWDAEAHRGAADPGVRSVSQIYAYYKQYGYATEVMGASFRNVDQILSLAGCDLLTISPELLEQL 249          
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Match: UPI000F7E5004 (transaldolase n=1 Tax=Serratia marcescens TaxID=615 RepID=UPI000F7E5004)

HSP 1 Score: 194 bits (493), Expect = 1.700e-57
Identity = 112/252 (44.44%), Postives = 157/252 (62.30%), Query Frame = 1
Query:    1 LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAE--KYKGIT--------GISLENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFRARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSEVQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQDYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL 726
            LT L++ + VV DT DI  +K       QD TTNPSL+  AA+  +Y+ +         G S +      D  +  A+  G EILK+V G +  ++D + S DT     +A++LI+ Y  +GI  DRI+IKLASTW+GIRA EQLEKEGI C +TL  S  Q RA A+AG  +I+ +VGR+ DW++ + P+     A++D GV+    + +YY+RH Y+T +M ASFR VEQ+ AL GCD+LTI P LL+QL
Sbjct:    5 LTSLRQLTTVVADTGDIAAMKLYQP---QDATTNPSLILNAAQIPEYRKLIDEAIAWARGQSSDREQQIADAADKLAVNIGLEILKLVPGRISTEVDARLSYDTVASVAKAKRLIKLYNEAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVYLISPFVGRIYDWYQAKQPAA-DYDADQDPGVKSVRTIYEYYKRHRYQTVIMGASFRKVEQILALAGCDRLTIAPNLLEQL 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V3H4_9STRA5.010e-6447.44Transaldolase n=1 Tax=Fibrocapsa japonica TaxID=94... [more]
D8LMM8_ECTSI5.080e-6346.39Transaldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A8J2ET33_9DINO3.810e-5945.10Transaldolase n=1 Tax=Amoebophrya sp. A25 TaxID=14... [more]
A0A536WMM0_9PROT1.560e-5845.78Transaldolase n=2 Tax=Betaproteobacteria bacterium... [more]
A0A510XCH8_9GAMM1.860e-5844.26Transaldolase n=3 Tax=Halomonas TaxID=2745 RepID=A... [more]
A0A521YIU6_9PROT2.200e-5847.56Transaldolase n=2 Tax=unclassified Betaproteobacte... [more]
TAL1_PECAS2.940e-5844.88Transaldolase 1 n=80 Tax=Pectobacteriaceae TaxID=1... [more]
A0A6G9I9Y8_9GAMM2.940e-5845.24Transaldolase n=1 Tax=Zophobihabitans entericus Ta... [more]
UPI001C9829AC1.210e-5744.98transaldolase n=1 Tax=Cupriavidus sp. AU9028 TaxID... [more]
UPI000F7E50041.700e-5744.44transaldolase n=1 Tax=Serratia marcescens TaxID=61... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig9contigH-akashiwo_Contig9:2836378..2837103 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMM8
PFAMsTAL_FSA
Model size726
Max annot lvl2759|Eukaryota
KEGG rclassRC00439,RC00604
KEGG koko:K00616
KEGG ReactionR01827
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.33e-64
EggNOG OGsCOG0176@1|root,KOG2772@2759|Eukaryota
Ec32 ortholog descriptionTransaldolase
Ec32 orthologEc-06_003940.1
EC2.2.1.2
Descriptionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
Cds size726
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388031.03105-CDS-H-akashiwo_Contig9:2836377..28371031681388031.03105-CDS-H-akashiwo_Contig9:2836377..2837103Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig9 2836378..2837103 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig9.43.1prot_H-akashiwo_Contig9.43.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig9 2836378..2837103 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig9.43.1

>prot_H-akashiwo_Contig9.43.1 ID=prot_H-akashiwo_Contig9.43.1|Name=mRNA_H-akashiwo_Contig9.43.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=242bp
LTRLKKSSNVVIDTADIDLIKTLAESGLQDVTTNPSLVRIAAEKYKGITG
ISLENCLVPDDLYELTAMEFGKEILKVVSGWVCIQLDIQNSDDTFMIAFR
ARQLIETYEASGIPRDRIMIKLASTWEGIRACEQLEKEGIRCLMTLTVSE
VQGRAAADAGASMIATYVGRVGDWHREQDPSLVGAPAEEDAGVRLTWGLQ
DYYRRHGYRTQVMAASFRSVEQVFALEGCDQLTIGPVLLKQL
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mRNA from alignment at H-akashiwo_Contig9:2836378..2837103+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig9.43.1 ID=mRNA_H-akashiwo_Contig9.43.1|Name=mRNA_H-akashiwo_Contig9.43.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig9:2836378..2837103+ (Heterosigma akashiwo CCMP452)
CTAACTCGTTTGAAAAAAAGCTCCAATGTCGTCATTGACACAGCCGATAT AGATCTTATCAAAACACTGGCTGAATCTGGTTTACAGGATGTGACCACAA ATCCGTCTCTGGTGAGAATTGCAGCTGAAAAGTACAAAGGAATAACTGGG ATTTCCCTTGAAAATTGCCTGGTCCCTGATGATCTGTATGAACTTACAGC AATGGAGTTTGGTAAAGAAATATTGAAGGTGGTTTCTGGATGGGTGTGCA TCCAGTTGGACATTCAAAATTCTGATGACACCTTCATGATAGCCTTCCGA GCTCGCCAGCTAATTGAGACATACGAAGCGTCTGGAATCCCCAGAGATAG AATCATGATTAAGCTTGCAAGCACCTGGGAAGGCATCCGAGCTTGCGAGC AGCTCGAGAAAGAGGGCATCCGCTGTTTGATGACACTGACAGTCTCCGAA GTGCAAGGCCGAGCTGCTGCAGATGCCGGCGCCAGCATGATCGCGACGTA CGTTGGCCGCGTCGGGGACTGGCACCGCGAGCAAGACCCATCGCTGGTGG GTGCCCCGGCCGAGGAGGACGCCGGGGTCCGGCTCACCTGGGGGCTCCAG GACTACTACCGCCGCCACGGCTACCGCACCCAGGTCATGGCGGCCAGCTT TCGGAGCGTGGAACAAGTCTTTGCCTTGGAAGGCTGCGACCAGCTGACGA TTGGCCCCGTGCTGCTCAAACAGCTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig9:2836378..2837103+

>mRNA_H-akashiwo_Contig9.43.1 ID=mRNA_H-akashiwo_Contig9.43.1|Name=mRNA_H-akashiwo_Contig9.43.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig9:2836378..2837103+ (Heterosigma akashiwo CCMP452)
CTAACTCGTTTGAAAAAAAGCTCCAATGTCGTCATTGACACAGCCGATAT
AGATCTTATCAAAACACTGGCTGAATCTGGTTTACAGGATGTGACCACAA
ATCCGTCTCTGGTGAGAATTGCAGCTGAAAAGTACAAAGGAATAACTGGG
ATTTCCCTTGAAAATTGCCTGGTCCCTGATGATCTGTATGAACTTACAGC
AATGGAGTTTGGTAAAGAAATATTGAAGGTGGTTTCTGGATGGGTGTGCA
TCCAGTTGGACATTCAAAATTCTGATGACACCTTCATGATAGCCTTCCGA
GCTCGCCAGCTAATTGAGACATACGAAGCGTCTGGAATCCCCAGAGATAG
AATCATGATTAAGCTTGCAAGCACCTGGGAAGGCATCCGAGCTTGCGAGC
AGCTCGAGAAAGAGGGCATCCGCTGTTTGATGACACTGACAGTCTCCGAA
GTGCAAGGCCGAGCTGCTGCAGATGCCGGCGCCAGCATGATCGCGACGTA
CGTTGGCCGCGTCGGGGACTGGCACCGCGAGCAAGACCCATCGCTGGTGG
GTGCCCCGGCCGAGGAGGACGCCGGGGTCCGGCTCACCTGGGGGCTCCAG
GACTACTACCGCCGCCACGGCTACCGCACCCAGGTCATGGCGGCCAGCTT
TCGGAGCGTGGAACAAGTCTTTGCCTTGGAAGGCTGCGACCAGCTGACGA
TTGGCCCCGTGCTGCTCAAACAGCTG
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