mRNA_H-akashiwo_Contig887.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig887.6.1
Unique NamemRNA_H-akashiwo_Contig887.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK)

HSP 1 Score: 542 bits (1397), Expect = 6.890e-190
Identity = 286/307 (93.16%), Postives = 289/307 (94.14%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTKLL 921
            MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGK  FVG DLSRDR EARTIKVTCETKIAQLLERHGL+N HKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQE AEYL GYLRRTA MGMVFGGRGGNPYEIRIVTD SDHGMCPDTARSTSGVSVY G+SLIIHKSKLQHL+TLS  EAELVALILA CEAKWVRGMLTALTRRRPHMTAYTDSMAV QMANQQQHLQR RHLNIK HFLKDEVAEGRLSVRHVRGKENTAD FTK L
Sbjct:  242 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGK--FVGLDLSRDR-EARTIKVTCETKIAQLLERHGLENAHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTD-SDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPL 544          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK)

HSP 1 Score: 355 bits (912), Expect = 2.080e-114
Identity = 188/305 (61.64%), Postives = 228/305 (74.75%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTK 915
            MLAIHVDD+Q+ASQS AL++QF+ ++  +F+ K     +  FVG DL RDR  A+TIKVT  +KIA +L++HGL++VH KFTPCAPGV MS DS+SEKAD+  YQ LVG   F++EFR D  F+VG+LSR+L+CPN DH + A YL GYLRRT G GMVFGG     Y IRI++D SDHG CPD+ RSTSG++V+ G+SLIIHKSKLQH+ TL   EAELVAL+L+ CEA+WVR ML  L   R  M AYTD MAV  MAN Q+ LQR RHLNIK HFL DEV+E RLSV H+ GK N  D FTK
Sbjct:  419 MLAIHVDDVQVASQSVALQQQFLDQLGAEFKYKLSPTSR--FVGYDLERDR-VAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGS--RDYRIRIISD-SDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTK 717          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK)

HSP 1 Score: 339 bits (870), Expect = 1.520e-112
Identity = 182/296 (61.49%), Postives = 220/296 (74.32%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGK 888
            MLAI VDDIQ+ASQS AL+++FV ++ + F+ K     +  FVG D+ RDR  A+TIKVT  +K+AQ+LE HGL  VH K+TPCAPGV +S DS+ ++ D++ YQ LVG  QFIREFR D +FAVG+LS++L  PN DH + A YL GYLRRTA  GMVFGG     Y +R+V+D SDHG CPDT RSTSG+ V+ G SLI+HKSKLQH+ TLS  EAELVAL+LA CEAKWV  ML  L R R  + AYTD MAV  MAN Q+HLQR RHLNIK HFLKDEV+E RLSV H+ GK
Sbjct:   90 MLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASR--FVGYDIERDR-AAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGA--RDYTVRVVSD-SDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGK 379          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK)

HSP 1 Score: 339 bits (870), Expect = 6.150e-110
Identity = 182/296 (61.49%), Postives = 220/296 (74.32%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGK 888
            MLAI VDDIQ+ASQS AL+++FV ++ + F+ K     +  FVG D+ RDR  A+TIKVT  +K+AQ+LE HGL  VH K+TPCAPGV +S DS+ ++ D++ YQ LVG  QFIREFR D +FAVG+LS++L  PN DH + A YL GYLRRTA  GMVFGG     Y +R+V+D SDHG CPDT RSTSG+ V+ G SLI+HKSKLQH+ TLS  EAELVAL+LA CEAKWV  ML  L R R  + AYTD MAV  MAN Q+HLQR RHLNIK HFLKDEV+E RLSV H+ GK
Sbjct:  287 MLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASR--FVGYDIERDR-AAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGA--RDYTVRVVSD-SDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGK 576          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK)

HSP 1 Score: 339 bits (870), Expect = 6.040e-108
Identity = 182/296 (61.49%), Postives = 220/296 (74.32%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGK 888
            MLAI VDDIQ+ASQS AL+++FV ++ + F+ K     +  FVG D+ RDR  A+TIKVT  +K+AQ+LE HGL  VH K+TPCAPGV +S DS+ ++ D++ YQ LVG  QFIREFR D +FAVG+LS++L  PN DH + A YL GYLRRTA  GMVFGG     Y +R+V+D SDHG CPDT RSTSG+ V+ G SLI+HKSKLQH+ TLS  EAELVAL+LA CEAKWV  ML  L R R  + AYTD MAV  MAN Q+HLQR RHLNIK HFLKDEV+E RLSV H+ GK
Sbjct:  463 MLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASR--FVGYDIERDR-AAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGA--RDYTVRVVSD-SDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGK 752          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A2Z7DB35_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7DB35_9LAMI)

HSP 1 Score: 154 bits (388), Expect = 1.290e-39
Identity = 102/310 (32.90%), Postives = 165/310 (53.23%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLT-FVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTAL--TRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTKLL 921
            +L ++VDDI IA+  +    +    +  KF++K    GKL  F+G +++R    +R I +        LL   GL     + TP    +++++D      D   Y++L+G L ++   R D AFAV RLS+Y+S P   H E A  +L Y++ T G G+ +G    +  +I+  +D +D G C DT RS +G  V+ G S+I  ++K QH ++ S  EAE  ++  A CE  W+R +LT L  T   P  T + DS A   +A+     +R +H++I CH +++ V +G + + HV   +  AD FTK L
Sbjct:  146 VLLVYVDDIVIATNDEGAASELKLFLDNKFKLK--DLGKLKYFLGIEVARS---SRGISICQRNYAMNLLTEAGLLGCKPRSTPMDANIKLTQDDGDMLPDPSSYRRLIGRLLYLTVTRPDLAFAVNRLSQYVSKPRIPHIEAALNILRYVKGTVGQGLFYGSN--SDLKIKFFSD-ADWGACLDTRRSVTGYCVFLGESMISWRAKKQHTVSRSSAEAEYRSMAAATCEILWIRSLLTDLGVTCDAP-ATLFCDSQAAIHIASNPVFHERTKHIDIDCHVVRERVQQGIVKLMHVSSTQQLADLFTKAL 446          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A2Z7D256_9LAMI (Integrase catalytic domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7D256_9LAMI)

HSP 1 Score: 151 bits (382), Expect = 2.150e-37
Identity = 97/309 (31.39%), Postives = 164/309 (53.07%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLT-FVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTAL-TRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTKLL 921
            +L ++VDDI IA+ ++    +    +  KF++K    GKL  F+G +++R    +R I +         L   GL     + TP    V+++++      D   Y++L+G L ++   R D AFAV +LS+Y+S P   H E A  +L Y++ T G G+ +G    +   ++  +D +D G C DT RS +G  V+ G S+I  ++K QH ++ S  EAE  ++  A CE  W+R +LT L  +     T + DS A   +A+     +R +H++I CH ++++V +G + + HV   +  AD FTK L
Sbjct:  691 VLLVYVDDIVIATNNEEAASELKSFLNNKFKLK--DLGKLKYFLGIEVARS---SRGISICQRNYAMNFLTEAGLMGCRPRSTPMEANVKITQEDGEILPDPSSYRRLIGRLLYLTVTRPDLAFAVNKLSQYVSKPRLPHMEAALNILRYVKGTIGQGLYYGSN--SDLRLKFFSD-ADWGACLDTRRSVTGYCVFLGESMISWRAKKQHTVSRSSAEAEYRSMAAATCEILWIRSLLTDLGVKCDGPATLFCDSQAAIHIASNPVFHERTKHIDIDCHVIREKVQQGIVKLMHVSSVQQLADLFTKAL 991          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A5N6MPP0_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MPP0_9ASTR)

HSP 1 Score: 147 bits (370), Expect = 6.920e-36
Identity = 94/311 (30.23%), Postives = 176/311 (56.59%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSD-GKLTF-VGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFG-GRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALT-RRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTKLL 921
            ++A++VDD+ +     A    F +++QTKF++   SD G+LT+ +G +++++    + +++  E+   ++L+  G+K+ +    P  PG++  +D   E  D   ++++VG L+++   R D A++VG LSRY+  P + H ++ +++L Y++ T G G+V+   + G P ++   +D S H   PD  RST+G   Y G+  I   S+ Q  + LS  EAE +A   AAC+A W+RG+L+ +T      +    D+ +  Q+        R +H++ + HF+++ V + +++V HV G E  AD  TK L
Sbjct:  461 VVAVYVDDLLVTGSEVAKILDFKRQMQTKFEM---SDLGRLTYYLGLEINQNE---KGVEIRQESYARKILKESGMKDSNPSKCPMEPGMKTGKDEQGEPVDATWFRRIVGCLRYLLHTRPDLAYSVGILSRYMHEPKQTHAQLMKHVLRYVKGTLGHGIVYKQDKEGKPKDLVGYSD-SSHNTDPDDGRSTTGYVFYYGSGPISWCSQKQSTVALSSCEAEFMAATSAACQAIWLRGVLSEITGEEEQRICLLVDNKSAIQLMKNPVFHGRSKHISTRYHFIRECVEKKQVAVEHVSGDEQKADILTKPL 764          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: Q9XIL8_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9XIL8_ARATH)

HSP 1 Score: 145 bits (367), Expect = 2.240e-35
Identity = 94/308 (30.52%), Postives = 164/308 (53.25%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIA-QLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAYTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTKLL 921
            ++ ++VDDI IAS ++A   Q  +++Q  F+++   D K  F+G +++R           C+ K A +LL   G+ N      P  P +++ +       D ++Y+++VG L ++   R D  FAV +L ++   P   H + A  +L Y++ T G G+ +     +   ++   D SD   CPD+  ST+G +++ G+SLI  +SK QH+++ S  EAE  AL LA CE  W+  +L +LT        ++DS A   +A      +R +H+ I CH +++++ +G L + HVR ++  AD  TK L
Sbjct:  943 VVLVYVDDIVIASTNEAAAVQLSQDLQNLFKLRDLGDLKY-FLGLEITRTEAGISL----CQRKYALELLASTGMINCKLVSVPMVPNLKLMKVDGELLEDREQYRRIVGTLMYLTITRPDITFAVNKLCQFSYAPTTAHLQAAHRVLQYIKGTVGQGLFYSAS--SDLTLKGFAD-SDWASCPDSRHSTTGFTMFVGDSLISLRSKKQHVVSRSSAEAEYRALALATCELVWLHTLLASLTAATTIPILFSDSTAAIYIAINPVFHERTKHIEIDCHTVREKIDDGELKLLHVRTEDQVADIMTKPL 1242          
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Match: A0A0V0HWA4_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HWA4_SOLCH)

HSP 1 Score: 141 bits (355), Expect = 2.680e-35
Identity = 95/310 (30.65%), Postives = 159/310 (51.29%), Query Frame = 1
Query:    1 MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRDRREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYLRRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSLIIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTA---YTDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTADFFTKLL 921
            +L ++VDDI I     +        + TKF  K     K  F+G +++R +   + I ++    I  LL   G        TP  P V ++RD  S   D + Y++LVG L ++   R D AFAV  +S+++S P   H E  E +L YL+R+ G+G+++G  G     I    D +D   C    RST+G  V+ G +L+  +SK Q +++ S  E+E  A+  + CE  W+  +LT +  R  H T    + D+ A   +A+   + +R +H+ + CHF+++++ +  +S  +V+  E  AD FTK L
Sbjct:   82 LLVVYVDDIVITGSDYSGISSLKSFLHTKFHTKDLGQLKY-FLGVEVTRSK---KGIFLSQRKYILDLLVEIGKSAAKPCSTPMVPNVHLTRDDGSPFDDPERYRRLVGKLNYLTVTRPDIAFAVSVVSQFMSAPTVKHWEALEQILCYLKRSPGLGILYGNHGHT--HIECFAD-ADWAGCKTNRRSTTGYCVFVGGNLVSWRSKKQGVVSRSSAESEYRAMAQSTCEIMWIHHILTEIGMR--HSTPAKLWCDNQAALHIASNPVYHERTKHIEVDCHFIREKIQDNLISTGYVKTGEQLADLFTKAL 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig887.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1TGB8_HETAK6.890e-19093.16Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6V1VJZ2_HETAK2.080e-11461.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y431_HETAK1.520e-11261.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DC66_HETAK6.150e-11061.49Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y454_HETAK6.040e-10861.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2Z7DB35_9LAMI1.290e-3932.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z7D256_9LAMI2.150e-3731.39Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6MPP0_9ASTR6.920e-3630.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q9XIL8_ARATH2.240e-3530.52Putative retroelement pol polyprotein n=1 Tax=Arab... [more]
A0A0V0HWA4_SOLCH2.680e-3530.65Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig887contigH-akashiwo_Contig887:301283..302203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4006.Lus10024900
Model size921
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.44e-34
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37THH@33090|Viridiplantae,3GHHH@35493|Streptophyta,4JTJR@91835|fabids
Descriptionmitochondrial protein
Cds size921
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388024.8644848-CDS-H-akashiwo_Contig887:301282..3022031681388024.8644848-CDS-H-akashiwo_Contig887:301282..302203Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig887 301283..302203 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig887.6.1prot_H-akashiwo_Contig887.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig887 301283..302203 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig887.6.1

>prot_H-akashiwo_Contig887.6.1 ID=prot_H-akashiwo_Contig887.6.1|Name=mRNA_H-akashiwo_Contig887.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=307bp
MLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKLTFVGPDLSRD
RREARTIKVTCETKIAQLLERHGLKNVHKKFTPCAPGVQMSRDSTSEKAD
IDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEVAEYLLGYL
RRTAGMGMVFGGRGGNPYEIRIVTDRSDHGMCPDTARSTSGVSVYTGNSL
IIHKSKLQHLMTLSKVEAELVALILAACEAKWVRGMLTALTRRRPHMTAY
TDSMAVAQMANQQQHLQRPRHLNIKCHFLKDEVAEGRLSVRHVRGKENTA
DFFTKLL
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mRNA from alignment at H-akashiwo_Contig887:301283..302203-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig887.6.1 ID=mRNA_H-akashiwo_Contig887.6.1|Name=mRNA_H-akashiwo_Contig887.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=921bp|location=Sequence derived from alignment at H-akashiwo_Contig887:301283..302203- (Heterosigma akashiwo CCMP452)
ATGCTGGCAATTCATGTGGATGACATCCAGATTGCCTCCCAGTCCAAGGC TCTCGAGGAGCAGTTTGTCAAGGAGATCCAGACAAAGTTTCAGATTAAGC GCGGGTCTGATGGCAAATTAACGTTTGTCGGGCCGGACCTCTCCAGGGAT AGGAGGGAGGCCAGAACCATCAAGGTCACGTGCGAGACCAAAATTGCGCA GCTTCTGGAGAGGCATGGCCTTAAGAACGTTCACAAGAAGTTCACTCCTT GTGCGCCTGGTGTCCAGATGTCCCGAGACTCCACGTCGGAGAAGGCGGAC ATAGATGAGTACCAGAAGCTGGTGGGGGGGCTGCAGTTCATCAGGGAGTT TCGTGCAGACACTGCTTTTGCGGTTGGGCGGCTCTCTAGGTACCTAAGCT GCCCCAACAAGGACCACCAGGAGGTGGCGGAGTACCTGCTGGGCTATCTC CGGCGGACGGCTGGCATGGGGATGGTTTTTGGTGGCCGTGGAGGCAACCC TTATGAAATACGAATAGTCACGGATCGTAGCGATCATGGGATGTGTCCTG ACACTGCAAGGTCGACCTCCGGTGTATCTGTGTATACTGGCAACTCGCTT ATTATTCACAAATCCAAGCTGCAGCATCTGATGACTCTGAGTAAGGTGGA AGCTGAGCTGGTGGCGCTCATTCTCGCGGCGTGTGAGGCAAAGTGGGTGC GGGGCATGCTGACGGCACTGACGCGCCGGAGGCCTCATATGACTGCTTAT ACTGACAGCATGGCAGTGGCGCAAATGGCAAACCAGCAGCAGCACCTTCA GAGACCACGCCATCTGAACATCAAGTGCCATTTTCTGAAGGATGAAGTGG CTGAGGGCAGGCTATCTGTGCGCCATGTAAGGGGTAAGGAGAATACTGCC GATTTTTTCACCAAGCTCCTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig887:301283..302203-

>mRNA_H-akashiwo_Contig887.6.1 ID=mRNA_H-akashiwo_Contig887.6.1|Name=mRNA_H-akashiwo_Contig887.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=921bp|location=Sequence derived from alignment at H-akashiwo_Contig887:301283..302203- (Heterosigma akashiwo CCMP452)
ATGCTGGCAATTCATGTGGATGACATCCAGATTGCCTCCCAGTCCAAGGC
TCTCGAGGAGCAGTTTGTCAAGGAGATCCAGACAAAGTTTCAGATTAAGC
GCGGGTCTGATGGCAAATTAACGTTTGTCGGGCCGGACCTCTCCAGGGAT
AGGAGGGAGGCCAGAACCATCAAGGTCACGTGCGAGACCAAAATTGCGCA
GCTTCTGGAGAGGCATGGCCTTAAGAACGTTCACAAGAAGTTCACTCCTT
GTGCGCCTGGTGTCCAGATGTCCCGAGACTCCACGTCGGAGAAGGCGGAC
ATAGATGAGTACCAGAAGCTGGTGGGGGGGCTGCAGTTCATCAGGGAGTT
TCGTGCAGACACTGCTTTTGCGGTTGGGCGGCTCTCTAGGTACCTAAGCT
GCCCCAACAAGGACCACCAGGAGGTGGCGGAGTACCTGCTGGGCTATCTC
CGGCGGACGGCTGGCATGGGGATGGTTTTTGGTGGCCGTGGAGGCAACCC
TTATGAAATACGAATAGTCACGGATCGTAGCGATCATGGGATGTGTCCTG
ACACTGCAAGGTCGACCTCCGGTGTATCTGTGTATACTGGCAACTCGCTT
ATTATTCACAAATCCAAGCTGCAGCATCTGATGACTCTGAGTAAGGTGGA
AGCTGAGCTGGTGGCGCTCATTCTCGCGGCGTGTGAGGCAAAGTGGGTGC
GGGGCATGCTGACGGCACTGACGCGCCGGAGGCCTCATATGACTGCTTAT
ACTGACAGCATGGCAGTGGCGCAAATGGCAAACCAGCAGCAGCACCTTCA
GAGACCACGCCATCTGAACATCAAGTGCCATTTTCTGAAGGATGAAGTGG
CTGAGGGCAGGCTATCTGTGCGCCATGTAAGGGGTAAGGAGAATACTGCC
GATTTTTTCACCAAGCTCCTT
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