mRNA_H-akashiwo_Contig884.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A7S3UUF5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUF5_HETAK) HSP 1 Score: 212 bits (539), Expect = 3.560e-66 Identity = 99/144 (68.75%), Postives = 123/144 (85.42%), Query Frame = 1 Query: 325 QKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFD 756 +KG DP + WG DQAVA+IK AFS +LARYDPSKR+LLQTD+S ALGAVI+HY +D +G+R EQPIYFASK ++ HQ+NYSVTE+E LAV+WAV+ F+TML+G++FLLETDH ALRSILTT++PEGRLARW++KLQE D Sbjct: 2 KKGRDPGKDWGAEHDQAVAEIKEAFSEAPLLARYDPSKRLLLQTDSSKSALGAVISHYTVDADGKRHEQPIYFASKTMNPHQKNYSVTEQECLAVVWAVELFKTMLVGKFFLLETDHQALRSILTTKNPEGRLARWIIKLQEMD 145
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A6H5I017_9HYME (RNA-directed DNA polymerase n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I017_9HYME) HSP 1 Score: 213 bits (541), Expect = 6.420e-59 Identity = 114/280 (40.71%), Postives = 172/280 (61.43%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSRNWAPVGDLED 843 ++DD+ I + + EH+ + +V L++ L +K++ +SV+ LG+++ EGLR D+V + P +K ++SF+G++ +Y F+ L+ + PLT+LTQK D A HWGP Q+QA +K + VLAR DP LQTDAS+FALGAV+ ID E E PI +AS+ L K +RNY+VTEKE LAVLWAV+ +R +LG +F + TDH +L+ + +DP GRLARW LQ + E+ +R G H PD++SR+ + ++D Sbjct: 554 YIDDIIIATPTFNEHKYWLNKVIDKLNSVDLTINKEKSEFCCQSVQFLGYIIDREGLRTDPDKVKAVLNCPPPKNIKQLKSFMGMVGWYSRFLKDLAEIRTPLTKLTQK--DIAWHWGPEQEQAFTTLKRMLTEAPVLARPDPDIMFTLQTDASNFALGAVLTQ-DIDGE----EHPIAYASRALTKQERNYTVTEKECLAVLWAVEKYRGYILGSHFRVITDHASLKWLHNLKDPTGRLARWATALQAYSMEIIHRKGALHKVPDYLSRSIEEIASIDD 826
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A015KU97_RHIIW (Gag-pol fusion protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015KU97_RHIIW) HSP 1 Score: 196 bits (497), Expect = 1.300e-56 Identity = 107/270 (39.63%), Postives = 161/270 (59.63%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSR 813 +LD+V IYS++ E+H H+R +F L AGLK PDK + ++ LG +V+ +G+R ++ ++K V ++ FLG+ +YY+ FVP S +A PL +L +KG A WG Q A +K +L D K+ +L TDAS F LGA+++ +DE+G ++ I +AS+ +K + NYS TE E LAV+WAV++F + G+ F L TDH AL + T P GRLARWV+KLQ +DFE +R+ +H+ D +SR Sbjct: 130 YLDNVIIYSDTFEQHLEHLRVIFDRLEDAGLKLNPDKCSFVKEELEFLGHIVSNKGIRTDPAKIQKVKDFPVPLNVTQLRGFLGLASYYRRFVPGFSRIATPLNKLLKKGV--AYSWGKEQQVAFEQLKQTLIASPILIFPDFEKQFVLLTDASTFGLGAILSQ--LDEDGN--DRVIAYASRTCNKAESNYSATELECLAVIWAVKHFHAYIYGQRFKLVTDHAALCHLFNTATPIGRLARWVMKLQMYDFETTHRSRRKHLNVDSLSR 393
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A4Y2L448_ARAVE (RNA-directed DNA polymerase n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2L448_ARAVE) HSP 1 Score: 203 bits (516), Expect = 6.710e-56 Identity = 106/271 (39.11%), Postives = 162/271 (59.78%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSRN 816 +LDD+ ++S + ++H +R V + AGL P K R VK LG +V+ G+RP D+V ++ V+ I+SFLG+ +Y++ F+ LAEPL L ++ D H+G + +A ++KAA ++D VL YD + + TDAS + +GAV+ + VE+ I +AS+ L K ++NYS TE+E LAV+WA+ FR L GR+F + TDH +L +++ +DP GRLARW L+LQE DF V Y+ G +H D +SRN Sbjct: 440 YLDDIIVFSETFKDHISRLRTVLKCIQEAGLVLNPKKCLFAAREVKILGHLVSRNGVRPDPDKVRAVRNFPTPKNVRDIRSFLGLCSYFRRFIKGFCYLAEPLQLLLKR--DAKFHFGAEEAEAFDNLKAALTSDPVLGLYDENSPTEIHTDASGYGIGAVLVQIQ-----KEVEKVIAYASRTLTKAEKNYSTTERECLAVVWAINKFRPYLFGRHFTVVTDHHSLCWLMSLKDPSGRLARWALRLQEHDFSVMYKTGKKHKDADTLSRN 703
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A4Y2W5V2_ARAVE (RNA-directed DNA polymerase (Fragment) n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2W5V2_ARAVE) HSP 1 Score: 201 bits (512), Expect = 7.290e-56 Identity = 106/271 (39.11%), Postives = 161/271 (59.41%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSRN 816 +LDD+ ++S + ++H +R V + AGL P K R VK LG +V+ G+RP D+V ++ V+ I+SFLG+ +Y++ F+ LAEPL L ++ D H+G + +A ++KAA ++D VL YD + + TDAS + +GAV+ + VE+ I +AS L K ++NYS TE+E LAV+WA+ FR L GR+F + TDH +L +++ +DP GRLARW L+LQE DF V Y+ G +H D +SRN Sbjct: 51 YLDDIIVFSETFKDHISRLRTVLKCIQEAGLVLNPKKCLFAAREVKILGHLVSRNGVRPDPDKVRAVRNFPTPKNVRDIRSFLGLCSYFRRFIKGFCYLAEPLQLLLKR--DAKFHFGAEEAEAFHNLKAALTSDPVLGLYDENSPTEIHTDASGYGIGAVLVQIQ-----KEVEKVIAYASLTLTKAEKNYSTTERECLAVVWAINKFRPYLFGRHFTVVTDHHSLCWLMSLKDPSGRLARWALRLQEHDFSVMYKTGKKHKDADTLSRN 314
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A4Y1ZSB0_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZSB0_ARAVE) HSP 1 Score: 201 bits (511), Expect = 1.000e-55 Identity = 105/271 (38.75%), Postives = 161/271 (59.41%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSRN 816 +LDD+ ++S + ++H +R V + AGL P K R VK LG +V+ G+RP D+V ++ V+ I+SFLG+ +Y++ F+ LAEPL L ++ D H+G + +A ++K A ++D VL YD + + TDAS + +GAV+ + VE+ I +AS+ L K ++NYS TE+E LAV+WA+ FR L GR+F + TDH +L +++ +DP GRLARW L+LQE DF V Y+ G +H D +SRN Sbjct: 309 YLDDIIVFSETFKDHISRLRTVLKCIQEAGLVLNPKKCLFAAREVKILGHLVSRNGVRPDPDKVRAVRKFPTPKNVRDIRSFLGLCSYFRRFIKGFCYLAEPLQLLLKR--DAKFHFGAEEAEAFDNLKTALTSDPVLGLYDENSPTEIHTDASGYGIGAVLVQIQ-----KEVEKVIAYASRTLTKAEKNYSTTERECLAVVWAINKFRPYLFGRHFTVVTDHHSLCWLMSLKDPSGRLARWALRLQEHDFSVMYKTGKKHKDADTLSRN 572
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A0V0G672_TRIDM (RNA-directed DNA polymerase (Fragment) n=1 Tax=Triatoma dimidiata TaxID=72491 RepID=A0A0V0G672_TRIDM) HSP 1 Score: 203 bits (516), Expect = 1.010e-55 Identity = 110/271 (40.59%), Postives = 169/271 (62.36%), Query Frame = 1 Query: 1 SHLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSR 813 ++LDD+ I +N+ +EH +++ VF L AGL+ DK + + LGF+V GL+ +V+ + P VKG+++FLG+ ++Y+ F+P S +A P+ +L K WGP Q++A+ +K+ ++ +L+R D S LQTDAS LGAV+A + EG+ E+ I FAS+ L K + NYSVTEKE LAV+W+++ FR L G +F + TDH++L+ + ++P GRLARW L+LQ FDF++ YR GP H PD +SR Sbjct: 329 AYLDDIIIATNTFQEHLKYLNIVFTRLREAGLQVNRDKCEFGCSELSYLGFLVNENGLQVDPSKVESVLAFPPPKDVKGLRTFLGLASWYRRFIPNFSTIAAPMHKLLHKKEKWV--WGPEQEKAMDTLKSILTSPPILSRPDFSVPFFLQTDASHSGLGAVLAQ---EIEGK--ERVIAFASRALTKPEINYSVTEKECLAVIWSIKKFRPYLEGYHFHVITDHSSLKWLQNLKNPSGRLARWALELQGFDFDIMYRKGPLHKVPDALSR 592
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A224X5N6_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X5N6_9HEMI) HSP 1 Score: 203 bits (516), Expect = 1.230e-55 Identity = 113/270 (41.85%), Postives = 162/270 (60.00%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSR 813 +LDD+ IYS + EEH + + V L A L+ DK QR V+ LG +VT +G++P + +V+ + T K +++FLG+ YY+ FV + S LA+PLT+L +K + WG +Q QA +K A + +VL D +L TDAS ALGAV++ EG E+P+ +AS++L +RNYS TE+E LAV+WA FR LLGR F L TDH+ALR +L RDP RL RW L+L EF ++V ++ G +H D +SR Sbjct: 320 YLDDIIIYSATMEEHCQRLERVLVRLENANLRVNLDKCTFAQREVRYLGHLVTADGVKPDSGKVEAVAKYPVPKTTKEVKAFLGLAGYYRRFVKRFSDLAQPLTQLLRK--EVTFQWGESQQQAFESLKEALCSTSVLIYPDFRDPFILSTDASGVALGAVLSQIR---EGH--ERPVAYASRQLSAAERNYSTTERELLAVIWATAQFRCYLLGRRFTLVTDHSALRWMLHLRDPSARLTRWSLRLSEFTYDVVHKPGMKHANADALSR 582
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: A0A224XIF4_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XIF4_9HEMI) HSP 1 Score: 202 bits (514), Expect = 2.230e-55 Identity = 115/276 (41.67%), Postives = 164/276 (59.42%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSRNWAPVG 831 +LDD+ I+S + EEH +R+V + A LK R +K Q+ VK LG +VT +G++P ++V +K K ++ FLG+ YY+ F+ S LA+PLT L +KG W Q +A ++ +DTVL D SK L TDAS+ ALGAV+A E E+PI +AS++L+K ++NYS TE+E LAV+WA FR LLGR F L TDH AL+ +L +DP RL++W L+L E+D+EV +R G H+ D +SR VG Sbjct: 315 YLDDIIIFSATLEEHCTRLRKVLERIQGANLKLRMEKCHFAQKEVKYLGHLVTADGVKPDPEKVAAVKGYRVPCNSKEVKGFLGLAGYYRRFIAGFSNLAKPLTSLLRKGV--TFKWEKEQQKAFEVLREVLCSDTVLVYPDYSKPFTLATDASNVALGAVLAQKCDGE-----ERPIAYASRQLNKAEQNYSATERELLAVVWATNQFRCYLLGRRFTLITDHAALQWMLRIKDPSARLSKWSLRLMEYDYEVIHRPGKHHLNADALSRVVGAVG 583
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Match: UPI001ED87E86 (uncharacterized protein LOC124166472 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87E86) HSP 1 Score: 202 bits (514), Expect = 2.560e-55 Identity = 112/270 (41.48%), Postives = 157/270 (58.15%), Query Frame = 1 Query: 4 HLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGFMVTPEGLRPLADRVDRIKTLDPEHTVKGIQSFLGIINYYKGFVPKLSVLAEPLTRLTQKGADPARHWGPAQDQAVADIKAAFSTDTVLARYDPSKRILLQTDASDFALGAVIAHYHIDEEGRRVEQPIYFASKKLDKHQRNYSVTEKEGLAVLWAVQYFRTMLLGRYFLLETDHTALRSILTTRDPEGRLARWVLKLQEFDFEVAYRAGPEHVPPDFMSR 813 +LDD+ ++ + EEH + EV L AGLK P K Q + SV+ LG ++T +G++P ++ IK H +K ++ FLG++ YY+ F+P + +A PLT +T+KG A W ++ A D VL D + LL TDAS A+GAV+A + G EQ + +AS+KL + + NYS EKE LAV+WAV+YFR L GR F + TDH LR +LT +DP RL RW L L EF+FEV +RAG H D +SR Sbjct: 831 YLDDIIVFGCTIEEHLERLTEVLERLRGAGLKVNPHKCQFLKSSVEYLGHIITDKGVQPDPRKIIAIKEYPLPHNIKTLRGFLGLVGYYRRFIPDFARIARPLTEMTRKGV--AMAWSEEARGGFERLREALCRDPVLIFPDFREPFLLFTDASGAAIGAVLA-----QRGPAGEQVVAYASRKLSRPEMNYSTVEKECLAVVWAVKYFRCYLYGRRFTVVTDHRPLRWLLTLKDPTSRLIRWSLLLSEFEFEVHHRAGKAHQNADALSR 1093 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig884.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig884.4.1 >prot_H-akashiwo_Contig884.4.1 ID=prot_H-akashiwo_Contig884.4.1|Name=mRNA_H-akashiwo_Contig884.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=281bp SHLDDVFIYSNSEEEHERHVREVFAVLHAAGLKTRPDKTQLFQRSVKCLGback to top mRNA from alignment at H-akashiwo_Contig884:51328..52170+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig884.4.1 ID=mRNA_H-akashiwo_Contig884.4.1|Name=mRNA_H-akashiwo_Contig884.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=843bp|location=Sequence derived from alignment at H-akashiwo_Contig884:51328..52170+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig884:51328..52170+ >mRNA_H-akashiwo_Contig884.4.1 ID=mRNA_H-akashiwo_Contig884.4.1|Name=mRNA_H-akashiwo_Contig884.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=843bp|location=Sequence derived from alignment at H-akashiwo_Contig884:51328..52170+ (Heterosigma akashiwo CCMP452)back to top |