mRNA_H-akashiwo_Contig879.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A7S3XXV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXV3_HETAK) HSP 1 Score: 261 bits (668), Expect = 2.250e-85 Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGATSKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTI VDNLSAQFIAEGATSKK KFI++KFHFIRDCIAKGLVRVIHI SEENLADLFTKPLG Sbjct: 192 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTIFVDNLSAQFIAEGATSKKCKFIEIKFHFIRDCIAKGLVRVIHISSEENLADLFTKPLG 326
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A7S4D8N3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8N3_HETAK) HSP 1 Score: 261 bits (668), Expect = 5.160e-80 Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGATSKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTI VDNLSAQFIAEGATSKK KFI++KFHFIRDCIAKGLVRVIHI SEENLADLFTKPLG Sbjct: 740 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTIFVDNLSAQFIAEGATSKKCKFIEIKFHFIRDCIAKGLVRVIHISSEENLADLFTKPLG 874
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A7S4D6I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6I2_HETAK) HSP 1 Score: 172 bits (435), Expect = 1.270e-48 Identity = 83/134 (61.94%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGATSKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPL 402 FSDSDWA+D DDRKSTTG +F+GLCL+ WK+LKQ L ALS+ ++EY+ALA+T + +L R L +G+EQ GPT + VDN+SA IAEGAT K SKFI L++HFIRD IA+G V+V+HI +E N++DLFTKPL Sbjct: 368 FSDSDWAADPDDRKSTTGMALFLGLCLIMWKSLKQPLVALSTAESEYIALAYTIKHVLLQRLQLCHVGYEQQGPTPVFVDNISAMHIAEGAT-KSSKFIDLRWHFIRDAIARGEVKVVHIDTEHNISDLFTKPL 500
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A2I0WA95_9ASPA (Putative mitochondrial protein n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WA95_9ASPA) HSP 1 Score: 127 bits (318), Expect = 4.070e-33 Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGATSK-KSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 +SDSDWA D DRKSTTGYC F+G L++W+ KQ A SST+AEY ALA I++ R LLKE S PT + DN+S+ +A + ++K I++ FHF+R+CI L+ V +I + + LADLFTKPL Sbjct: 138 YSDSDWAGDPADRKSTTGYCAFLGSNLISWQVKKQKTVARSSTEAEYRALATATTDIIWLRRLLKEFSIPTSAPTVLLCDNISSIALANNPIFRARTKHIEIDFHFVRECIKNKLITVSYIHTVDQLADLFTKPLS 273
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A2I0VLT3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VLT3_9ASPA) HSP 1 Score: 125 bits (315), Expect = 7.280e-32 Identity = 64/136 (47.06%), Postives = 88/136 (64.71%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGAT-SKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 +SDSDWA D DR+STTGYC F+G L++W+ KQ A SST+AEY ALA I++ + LL E G S PTT+ DN+S+ +A ++K I++ FHF+R+CI L++V HI + + LADLFTK L Sbjct: 231 YSDSDWAGDPIDRRSTTGYCAFLGSNLISWQVKKQKTVARSSTEAEYRALATAAMDIIWLQRLLGEFGITSSSPTTLFCDNISSIALANNPVFHARTKHIEIDFHFVRECINNRLLQVAHIHTTDQLADLFTKALS 366
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A371GS42_MUCPR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371GS42_MUCPR) HSP 1 Score: 124 bits (312), Expect = 8.840e-32 Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVAL-AFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGAT-SKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPL 402 F DSD+A D+DDRKSTTG+ F+G C W + KQ + LS+ +AEYVA + TCQ I + R LLKE Q T I +DN SAQ +A+ ++SK I ++HFIR+CI K V ++H+ +++ +AD+FTKPL Sbjct: 201 FCDSDFAGDVDDRKSTTGFVFFMGGCAFTWNSKKQAIVTLSTCEAEYVAATSCTCQAI-WLRRLLKEFNMNQEESTKIHIDNKSAQILAKNPVFHERSKHIDTRYHFIRECIVKKEVELVHVKTQDQVADIFTKPL 335
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: UPI0009F1B6C9 (uncharacterized protein LOC110092095 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F1B6C9) HSP 1 Score: 123 bits (309), Expect = 9.190e-32 Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGAT-SKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 + DSDWA D DRKSTTGYC F+G L++W KQ A SST+AEY A+A I++ R LL+E GF Q+ PT + DN SA +A ++K I++ HFIR+CI ++V HI S++ LAD FTK L Sbjct: 134 YVDSDWAGDQQDRKSTTGYCNFLGNTLISWSVKKQTTIARSSTEAEYRAIAAVTTEIIWLRRLLEEFGFAQTSPTILYCDNTSAIVLANNPVYHARTKHIEVDCHFIRECIKNQSIQVHHISSKDQLADFFTKSLS 269
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A2I0W5F1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W5F1_9ASPA) HSP 1 Score: 120 bits (301), Expect = 9.220e-32 Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGATSK-KSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 FSD+DWASD+ DRKS +G+C F+G L++W KQ A SST+AEY +L+ +L+ R L E+ QS PTTI DN SA IA+ ++K I++ +HFIR I+ G +++ HI S++ +AD+ TKP Sbjct: 39 FSDADWASDITDRKSVSGFCTFLGPNLISWTVKKQATVAKSSTEAEYRSLSAAASDVLWLRRLTAELDMPQSSPTTIYCDNTSAMAIAKNLVFHGRTKHIEIDYHFIRQQISSGNIQLAHISSKDQIADILTKPFS 174
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: UPI0009F67E01 (uncharacterized protein LOC110114696 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F67E01) HSP 1 Score: 124 bits (310), Expect = 9.400e-32 Identity = 64/136 (47.06%), Postives = 88/136 (64.71%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGAT-SKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 ++DSDWA D DRKSTTGYC F+G ++W A KQ A SST+AEY A+A T I++ R LL+E+ Q+ PT + DN SA +A ++K I++ HFIR+CI ++V HI S++ +ADLFTKPL Sbjct: 154 YTDSDWAGDSQDRKSTTGYCNFLGSTPISWCAKKQTTVARSSTEAEYRAIALTTTEIIWLRRLLEELDCIQAKPTPLYCDNTSAIALANNPVYHARTKHIEIDCHFIRECIKNQFIQVHHIASKDQIADLFTKPLS 289
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Match: A0A803NKY9_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NKY9_CANSA) HSP 1 Score: 119 bits (299), Expect = 9.540e-32 Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 1 FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALAFTCQVILFFRDLLKEIGFEQSGPTTISVDNLSAQFIAEGAT-SKKSKFIKLKFHFIRDCIAKGLVRVIHIPSEENLADLFTKPLG 405 FSD+DWA +DDRKSTTGYC+++G L+ W + KQ A SSTK EY AL+ T + + L KE+G P I DN A+ +A ++K I++ H+IRD + +G + + HIP+ E AD+FTK + Sbjct: 13 FSDADWAGSIDDRKSTTGYCVYLGGNLITWSSKKQKAVAKSSTKVEYRALSQTASEVAWLNSLFKELGIPHKLPAIIWCDNAGAKLLASNPIFHSRTKHIEVDVHYIRDQVKQGKIEIRHIPTSEQTADIFTKAIS 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig879.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig879.6.1 >prot_H-akashiwo_Contig879.6.1 ID=prot_H-akashiwo_Contig879.6.1|Name=mRNA_H-akashiwo_Contig879.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=135bp FSDSDWASDLDDRKSTTGYCIFIGLCLVAWKALKQDLTALSSTKAEYVALback to top mRNA from alignment at H-akashiwo_Contig879:358226..358630+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig879.6.1 ID=mRNA_H-akashiwo_Contig879.6.1|Name=mRNA_H-akashiwo_Contig879.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=405bp|location=Sequence derived from alignment at H-akashiwo_Contig879:358226..358630+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig879:358226..358630+ >mRNA_H-akashiwo_Contig879.6.1 ID=mRNA_H-akashiwo_Contig879.6.1|Name=mRNA_H-akashiwo_Contig879.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=405bp|location=Sequence derived from alignment at H-akashiwo_Contig879:358226..358630+ (Heterosigma akashiwo CCMP452)back to top |