mRNA_H-akashiwo_Contig875.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A7S2UVI1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVI1_9STRA) HSP 1 Score: 385 bits (990), Expect = 9.210e-133 Identity = 192/257 (74.71%), Postives = 224/257 (87.16%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASAD-KEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARLI G L +KII+A+KDLVTEANI ++ GISLQAMDSSHVSLC LMLR DM+DHFR DR LG+N N +KILKCAGNDDI+T++AED+PD L M+FES++QSRISDFE+KLMDI SEHLGIPDT+YK T+ +P+AEF RIVRDLSVIGETCTI C KDGVKFSVEGDLG GSITL+ + AD KEE+ V I M+E VEL FALRYL+SFTKA+PLGPT+S+SMSPDVPVVVE+PIEG+GY++YYLAPKID Sbjct: 1 MFEARLINGGLFRKIIDAIKDLVTEANIHCNENGISLQAMDSSHVSLCVLMLRNDMYDHFRCDRALALGLNTGNVAKILKCAGNDDIITMKAEDEPDVLQMVFESKDQSRISDFEMKLMDIQSEHLGIPDTEYKCTVQMPAAEFTRIVRDLSVIGETCTISCSKDGVKFSVEGDLGTGSITLRSTSDADTKEEERVVITMDEPVELQFALRYLSSFTKASPLGPTMSISMSPDVPVVVEFPIEGDGYIKYYLAPKID 257
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A812RGX4_SYMMI (Proliferating cell nuclear antigen n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RGX4_SYMMI) HSP 1 Score: 367 bits (941), Expect = 2.440e-125 Identity = 174/256 (67.97%), Postives = 222/256 (86.72%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARL++G++LKKIIEA+++LV +AN+D S TGIS+QAMDSSHVSLC+L++R + FDH+R D + +LG+N N SKILKCAGNDD+VTL++ DQ D+LT++FES Q RISDF++KLM+I+SEHLGIPDT+Y T+ LPS+EFQRI+RDL+V+G+TCTI C K+GV+FS GDLG G+I LK NAS DK+ED V I+M+E VEL FALRYLN+FTKATPLGPTV+LS+SPD+P++VEYP+ GYVRYYLAPKID Sbjct: 2 MFEARLVQGAILKKIIEAIRELVIDANLDCSSTGISMQAMDSSHVSLCALLMRAEAFDHYRCDVDMSLGLNTPNLSKILKCAGNDDVVTLKSTDQSDTLTLVFESSKQDRISDFDMKLMEIESEHLGIPDTEYSCTVRLPSSEFQRIMRDLTVLGDTCTIACTKEGVRFSASGDLGTGNILLKHNASVDKDEDAVVIDMQEPVELLFALRYLNTFTKATPLGPTVTLSLSPDLPILVEYPVGDLGYVRYYLAPKID 257
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A835ZEE1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE1_9STRA) HSP 1 Score: 363 bits (933), Expect = 4.010e-124 Identity = 178/256 (69.53%), Postives = 221/256 (86.33%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEA+L + SLLKKI+EA+++LVT+AN+D S+ GI++QAMDSSHVSLC+L LR D FDH+R DRN +LG+N+ N SKILKCAGN+D+ TLR ED D+LT+ FES Q RIS+FELKL+ +D+EHLGIPDT+YKA + +PSAEFQRI+RDLSVIG+TC+I KDGV+F VEGDLG+GSI++KQN +A+KEE+ V ++MEE VELTFALRYLN F KATPLGP V+LSMSPDVPVVVE+PIE GY+R+YLAPKID Sbjct: 1 MFEAKLNEASLLKKIVEAIRELVTDANLDCSEAGITMQAMDSSHVSLCALNLRSDGFDHYRCDRNLSLGLNLANLSKILKCAGNNDVCTLRTEDDADTLTVTFESPKQERISEFELKLIALDAEHLGIPDTNYKAQVRMPSAEFQRIIRDLSVIGDTCSIAVGKDGVRFGVEGDLGSGSISVKQNTAAEKEEERVEVHMEEPVELTFALRYLNFFAKATPLGPIVALSMSPDVPVVVEFPIETVGYLRFYLAPKID 256
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: W7TJJ6_9STRA (Proliferating cell nuclear antigen n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJJ6_9STRA) HSP 1 Score: 362 bits (928), Expect = 2.230e-123 Identity = 180/257 (70.04%), Postives = 218/257 (84.82%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEE-DNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARL +GSLLKKIIEA+KDLV EAN+D S+ G+++QAMD+SHVSLCSL +R FDH+R DR+ +LG+N+ N KILKCAGNDD+VTL+AED+PD+LT+MFES NQ RISDFELKLMDI++EHLGIP+ +YK TIS+PS EFQRIVRDL+VIGETC I C K+GVKFSV GDLG G++T++Q+++AD +E D V I MEE V L FALRYL FTKATPLG TV L MSPDVP+VVEYPI+G G + Y+LAPKID Sbjct: 1 MFEARLTEGSLLKKIIEAIKDLVQEANVDCSEEGLTMQAMDASHVSLCSLNMRHGGFDHYRCDRSISLGLNLANLGKILKCAGNDDVVTLKAEDEPDTLTLMFESPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSGEFQRIVRDLAVIGETCIITCTKEGVKFSVSGDLGNGNVTVRQSSAADGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGSTVKLHMSPDVPIVVEYPIDGIGSISYFLAPKID 257
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: D7FVX7_ECTSI (Proliferating cell nuclear antigen n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX7_ECTSI) HSP 1 Score: 361 bits (927), Expect = 3.280e-123 Identity = 179/256 (69.92%), Postives = 215/256 (83.98%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 M+EARL++ SLLKKIIEA+++LVT+AN+D S++GIS+QAMDSSHVSLC+LM+R D F H+R DR+ +LG++ + SKILKCAGNDD VTL+AED D+LT+MFES Q RISDFELKLMDIDSEHLGIP T+Y I +PSAEF RI+RDL VIG+TCTI CDKDGV FSV GD+G G+I ++ N S DKEED VT+ MEE V L FALRYL+ F KATPLGPTV++SM+PD PVVVEYPI+ GYVRYYLAPKID Sbjct: 1 MYEARLLQASLLKKIIEAVRELVTDANLDCSESGISMQAMDSSHVSLCALMIRSDGFQHYRCDRSLSLGLSTGSISKILKCAGNDDTVTLKAEDTADALTIMFESPKQDRISDFELKLMDIDSEHLGIPKTEYNCIIQMPSAEFARIMRDLQVIGDTCTIACDKDGVNFSVSGDMGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLKFALRYLSLFAKATPLGPTVTISMTPDNPVVVEYPIDTFGYVRYYLAPKID 256
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A835YRT1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT1_9STRA) HSP 1 Score: 358 bits (918), Expect = 7.660e-122 Identity = 174/256 (67.97%), Postives = 218/256 (85.16%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEA L + SLLKKI++++++LVT+AN+D SD GI++QAMDSSHVSLC+L LR D FDHFR DRN +LG+N+ N SKILKCAGN D+VTL++ED D+L + FES Q RIS+FELKL+ +D+EHLGIPDT+YKA I +PS +FQRI+RDL VIG+TCTI K+GV+FSVEGDLGAG+I +KQN +A+KEE+ V +++EE V LTFALRYLN FTKATPLGP V+LSMSPDVP+VVEYPI+ G+VR+YLAPKID Sbjct: 1 MFEATLSEASLLKKIVDSIRELVTDANLDCSDAGINMQAMDSSHVSLCALSLRNDGFDHFRCDRNLSLGVNLANLSKILKCAGNTDLVTLKSEDDADTLGVKFESAKQDRISEFELKLIALDAEHLGIPDTNYKAQIRMPSTDFQRIIRDLQVIGDTCTISATKEGVRFSVEGDLGAGNIAVKQNPNAEKEEEKVEVHIEEPVSLTFALRYLNFFTKATPLGPIVALSMSPDVPIVVEYPIDTTGFVRFYLAPKID 256
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: B8BWU2_THAPS (Proliferating cell nuclear antigen n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWU2_THAPS) HSP 1 Score: 354 bits (909), Expect = 1.850e-120 Identity = 175/256 (68.36%), Postives = 213/256 (83.20%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARL +G + K++IEALKDLV EANID +D IS+QAMD+SHVSL ++ LR FDHFR DR +LG N N KILKCAGNDD++TLRAED+ DSL ++FES Q RI+DFELKLMDID+E LGIPDT+YK TI +PSAEFQRI+RDL V+G+TCTI C K+GVKFSV GDLG+G++ ++QN++A+K+E+ V I M+E VELTFALRYLN FTKAT LGPTV LSMSP+VPVVVEYPI G+++YYLAPKID Sbjct: 1 MFEARLTQGKVFKQLIEALKDLVQEANIDCTDDEISIQAMDNSHVSLVAVSLRSGGFDHFRCDRPISLGFNAANMGKILKCAGNDDVITLRAEDEGDSLALVFESPGQDRIADFELKLMDIDNEQLGIPDTEYKCTIQMPSAEFQRIIRDLQVLGDTCTISCTKEGVKFSVSGDLGSGNVLVRQNSAAEKDEEKVMIEMDEPVELTFALRYLNFFTKATSLGPTVILSMSPEVPVVVEYPIGETGHIKYYLAPKID 256
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A7R9WGG0_9STRA (Proliferating cell nuclear antigen n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9WGG0_9STRA) HSP 1 Score: 348 bits (894), Expect = 1.790e-117 Identity = 171/256 (66.80%), Postives = 211/256 (82.42%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARL +G + K +IE++KDLV +AN++ S+ IS+QAMDSSHVSL ++ LR FDH+R DR +LG N N SKILKC+GNDD +TL+AED DSLT+MFES +Q RI+DFELKLMDIDSE LGIPDT+YK TI +PS EFQRIVRD+ V+G+TC I C K+GV+FSV GDLG G++ ++ NA+A+KEED V I+MEE VELTFALRYLN FTKAT LGP+V +SMSPDVP+VVEYPIE +G ++YYLAPKID Sbjct: 50 MFEARLTQGRIFKSLIESIKDLVQDANLECSEDEISIQAMDSSHVSLVAVALRASGFDHYRCDRPLSLGFNSANLSKILKCSGNDDKITLKAEDNGDSLTLMFESGSQDRIADFELKLMDIDSEQLGIPDTEYKCTIKMPSTEFQRIVRDMQVLGDTCVISCTKEGVRFSVSGDLGTGNVLIRNNANAEKEEDQVLIDMEEPVELTFALRYLNFFTKATALGPSVIISMSPDVPIVVEYPIESSGEIKYYLAPKID 305
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A7S0BXQ4_9STRA (Proliferating cell nuclear antigen n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXQ4_9STRA) HSP 1 Score: 347 bits (889), Expect = 2.030e-117 Identity = 168/256 (65.62%), Postives = 213/256 (83.20%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARL +G +LK++++A+KDLV +ANIDVS+ +S+QAMDSSHVSL ++ LR MFDH+R DR +LG N N SKILKCAGNDD++TL+AE++ ++LT+MFES +Q RI+DFELKLMDID E LGIPDT YK TI +PS EFQRI+RDL V+G+TC I C K+G+KFSV GD+G G++ ++QN S+DKEED+V I+M+E VELTFALRYLN FTKAT LG V LSMSP+VP+VVEYPIE G +++YLAPKID Sbjct: 1 MFEARLTQGIILKQLVDAIKDLVQDANIDVSENELSIQAMDSSHVSLVAVSLREGMFDHYRCDRPISLGFNSQNLSKILKCAGNDDVITLKAEEEGENLTLMFESPSQDRIADFELKLMDIDGEQLGIPDTSYKTTIRMPSGEFQRIIRDLQVLGDTCIISCTKEGIKFSVSGDMGTGNVLIRQNTSSDKEEDHVIIDMDEPVELTFALRYLNFFTKATGLGKRVVLSMSPEVPIVVEYPIEDTGDIKFYLAPKID 256
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: L1IQM8_GUITC (Proliferating cell nuclear antigen n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IQM8_GUITC) HSP 1 Score: 346 bits (888), Expect = 2.510e-117 Identity = 169/256 (66.02%), Postives = 215/256 (83.98%), Query Frame = 1 Query: 1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768 MFEARL +GSLLKK+IEA+++LVT+AN DVS +G+SLQAMD+SHVSL SL+LR D F+HFR DR+ +LG+N+ + +K+LKCA NDD +TL+AEDQ D+LT+MFES NQ RISDFE+KLMDIDSEHLGIPDT+YKAT+ + +AEFQRI+RDLS IG+T +I C K+ VKFSVEGD+G G++ ++ NA+ DKE++ I +EE V LTFALRYLN FTKATPL TV+LSMSPDVP+V EY + G +R++LAPKID Sbjct: 1 MFEARLAQGSLLKKLIEAIRELVTDANFDVSTSGVSLQAMDTSHVSLVSLLLREDGFEHFRCDRSLSLGLNLASITKMLKCANNDDAITLKAEDQGDTLTLMFESPNQDRISDFEIKLMDIDSEHLGIPDTEYKATVKMSAAEFQRIMRDLSTIGDTVSISCTKEAVKFSVEGDIGQGNVIMRHNAAVDKEDEATIIELEEPVSLTFALRYLNLFTKATPLSSTVTLSMSPDVPLVTEYKVGDMGNIRFFLAPKID 256 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig875.3.1 >prot_H-akashiwo_Contig875.3.1 ID=prot_H-akashiwo_Contig875.3.1|Name=mRNA_H-akashiwo_Contig875.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=259bp MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLback to top mRNA from alignment at H-akashiwo_Contig875:102408..103735- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig875.3.1 ID=mRNA_H-akashiwo_Contig875.3.1|Name=mRNA_H-akashiwo_Contig875.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1328bp|location=Sequence derived from alignment at H-akashiwo_Contig875:102408..103735- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig875:102408..103735- >mRNA_H-akashiwo_Contig875.3.1 ID=mRNA_H-akashiwo_Contig875.3.1|Name=mRNA_H-akashiwo_Contig875.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=777bp|location=Sequence derived from alignment at H-akashiwo_Contig875:102408..103735- (Heterosigma akashiwo CCMP452)back to top |