mRNA_H-akashiwo_Contig875.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig875.3.1
Unique NamemRNA_H-akashiwo_Contig875.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A7S2UVI1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVI1_9STRA)

HSP 1 Score: 385 bits (990), Expect = 9.210e-133
Identity = 192/257 (74.71%), Postives = 224/257 (87.16%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASAD-KEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARLI G L +KII+A+KDLVTEANI  ++ GISLQAMDSSHVSLC LMLR DM+DHFR DR   LG+N  N +KILKCAGNDDI+T++AED+PD L M+FES++QSRISDFE+KLMDI SEHLGIPDT+YK T+ +P+AEF RIVRDLSVIGETCTI C KDGVKFSVEGDLG GSITL+  + AD KEE+ V I M+E VEL FALRYL+SFTKA+PLGPT+S+SMSPDVPVVVE+PIEG+GY++YYLAPKID
Sbjct:    1 MFEARLINGGLFRKIIDAIKDLVTEANIHCNENGISLQAMDSSHVSLCVLMLRNDMYDHFRCDRALALGLNTGNVAKILKCAGNDDIITMKAEDEPDVLQMVFESKDQSRISDFEMKLMDIQSEHLGIPDTEYKCTVQMPAAEFTRIVRDLSVIGETCTISCSKDGVKFSVEGDLGTGSITLRSTSDADTKEEERVVITMDEPVELQFALRYLSSFTKASPLGPTMSISMSPDVPVVVEFPIEGDGYIKYYLAPKID 257          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A812RGX4_SYMMI (Proliferating cell nuclear antigen n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RGX4_SYMMI)

HSP 1 Score: 367 bits (941), Expect = 2.440e-125
Identity = 174/256 (67.97%), Postives = 222/256 (86.72%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARL++G++LKKIIEA+++LV +AN+D S TGIS+QAMDSSHVSLC+L++R + FDH+R D + +LG+N  N SKILKCAGNDD+VTL++ DQ D+LT++FES  Q RISDF++KLM+I+SEHLGIPDT+Y  T+ LPS+EFQRI+RDL+V+G+TCTI C K+GV+FS  GDLG G+I LK NAS DK+ED V I+M+E VEL FALRYLN+FTKATPLGPTV+LS+SPD+P++VEYP+   GYVRYYLAPKID
Sbjct:    2 MFEARLVQGAILKKIIEAIRELVIDANLDCSSTGISMQAMDSSHVSLCALLMRAEAFDHYRCDVDMSLGLNTPNLSKILKCAGNDDVVTLKSTDQSDTLTLVFESSKQDRISDFDMKLMEIESEHLGIPDTEYSCTVRLPSSEFQRIMRDLTVLGDTCTIACTKEGVRFSASGDLGTGNILLKHNASVDKDEDAVVIDMQEPVELLFALRYLNTFTKATPLGPTVTLSLSPDLPILVEYPVGDLGYVRYYLAPKID 257          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A835ZEE1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE1_9STRA)

HSP 1 Score: 363 bits (933), Expect = 4.010e-124
Identity = 178/256 (69.53%), Postives = 221/256 (86.33%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEA+L + SLLKKI+EA+++LVT+AN+D S+ GI++QAMDSSHVSLC+L LR D FDH+R DRN +LG+N+ N SKILKCAGN+D+ TLR ED  D+LT+ FES  Q RIS+FELKL+ +D+EHLGIPDT+YKA + +PSAEFQRI+RDLSVIG+TC+I   KDGV+F VEGDLG+GSI++KQN +A+KEE+ V ++MEE VELTFALRYLN F KATPLGP V+LSMSPDVPVVVE+PIE  GY+R+YLAPKID
Sbjct:    1 MFEAKLNEASLLKKIVEAIRELVTDANLDCSEAGITMQAMDSSHVSLCALNLRSDGFDHYRCDRNLSLGLNLANLSKILKCAGNNDVCTLRTEDDADTLTVTFESPKQERISEFELKLIALDAEHLGIPDTNYKAQVRMPSAEFQRIIRDLSVIGDTCSIAVGKDGVRFGVEGDLGSGSISVKQNTAAEKEEERVEVHMEEPVELTFALRYLNFFAKATPLGPIVALSMSPDVPVVVEFPIETVGYLRFYLAPKID 256          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: W7TJJ6_9STRA (Proliferating cell nuclear antigen n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJJ6_9STRA)

HSP 1 Score: 362 bits (928), Expect = 2.230e-123
Identity = 180/257 (70.04%), Postives = 218/257 (84.82%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEE-DNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARL +GSLLKKIIEA+KDLV EAN+D S+ G+++QAMD+SHVSLCSL +R   FDH+R DR+ +LG+N+ N  KILKCAGNDD+VTL+AED+PD+LT+MFES NQ RISDFELKLMDI++EHLGIP+ +YK TIS+PS EFQRIVRDL+VIGETC I C K+GVKFSV GDLG G++T++Q+++AD +E D V I MEE V L FALRYL  FTKATPLG TV L MSPDVP+VVEYPI+G G + Y+LAPKID
Sbjct:    1 MFEARLTEGSLLKKIIEAIKDLVQEANVDCSEEGLTMQAMDASHVSLCSLNMRHGGFDHYRCDRSISLGLNLANLGKILKCAGNDDVVTLKAEDEPDTLTLMFESPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSGEFQRIVRDLAVIGETCIITCTKEGVKFSVSGDLGNGNVTVRQSSAADGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGSTVKLHMSPDVPIVVEYPIDGIGSISYFLAPKID 257          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: D7FVX7_ECTSI (Proliferating cell nuclear antigen n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX7_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 3.280e-123
Identity = 179/256 (69.92%), Postives = 215/256 (83.98%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            M+EARL++ SLLKKIIEA+++LVT+AN+D S++GIS+QAMDSSHVSLC+LM+R D F H+R DR+ +LG++  + SKILKCAGNDD VTL+AED  D+LT+MFES  Q RISDFELKLMDIDSEHLGIP T+Y   I +PSAEF RI+RDL VIG+TCTI CDKDGV FSV GD+G G+I ++ N S DKEED VT+ MEE V L FALRYL+ F KATPLGPTV++SM+PD PVVVEYPI+  GYVRYYLAPKID
Sbjct:    1 MYEARLLQASLLKKIIEAVRELVTDANLDCSESGISMQAMDSSHVSLCALMIRSDGFQHYRCDRSLSLGLSTGSISKILKCAGNDDTVTLKAEDTADALTIMFESPKQDRISDFELKLMDIDSEHLGIPKTEYNCIIQMPSAEFARIMRDLQVIGDTCTIACDKDGVNFSVSGDMGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLKFALRYLSLFAKATPLGPTVTISMTPDNPVVVEYPIDTFGYVRYYLAPKID 256          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A835YRT1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT1_9STRA)

HSP 1 Score: 358 bits (918), Expect = 7.660e-122
Identity = 174/256 (67.97%), Postives = 218/256 (85.16%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEA L + SLLKKI++++++LVT+AN+D SD GI++QAMDSSHVSLC+L LR D FDHFR DRN +LG+N+ N SKILKCAGN D+VTL++ED  D+L + FES  Q RIS+FELKL+ +D+EHLGIPDT+YKA I +PS +FQRI+RDL VIG+TCTI   K+GV+FSVEGDLGAG+I +KQN +A+KEE+ V +++EE V LTFALRYLN FTKATPLGP V+LSMSPDVP+VVEYPI+  G+VR+YLAPKID
Sbjct:    1 MFEATLSEASLLKKIVDSIRELVTDANLDCSDAGINMQAMDSSHVSLCALSLRNDGFDHFRCDRNLSLGVNLANLSKILKCAGNTDLVTLKSEDDADTLGVKFESAKQDRISEFELKLIALDAEHLGIPDTNYKAQIRMPSTDFQRIIRDLQVIGDTCTISATKEGVRFSVEGDLGAGNIAVKQNPNAEKEEEKVEVHIEEPVSLTFALRYLNFFTKATPLGPIVALSMSPDVPIVVEYPIDTTGFVRFYLAPKID 256          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: B8BWU2_THAPS (Proliferating cell nuclear antigen n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWU2_THAPS)

HSP 1 Score: 354 bits (909), Expect = 1.850e-120
Identity = 175/256 (68.36%), Postives = 213/256 (83.20%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARL +G + K++IEALKDLV EANID +D  IS+QAMD+SHVSL ++ LR   FDHFR DR  +LG N  N  KILKCAGNDD++TLRAED+ DSL ++FES  Q RI+DFELKLMDID+E LGIPDT+YK TI +PSAEFQRI+RDL V+G+TCTI C K+GVKFSV GDLG+G++ ++QN++A+K+E+ V I M+E VELTFALRYLN FTKAT LGPTV LSMSP+VPVVVEYPI   G+++YYLAPKID
Sbjct:    1 MFEARLTQGKVFKQLIEALKDLVQEANIDCTDDEISIQAMDNSHVSLVAVSLRSGGFDHFRCDRPISLGFNAANMGKILKCAGNDDVITLRAEDEGDSLALVFESPGQDRIADFELKLMDIDNEQLGIPDTEYKCTIQMPSAEFQRIIRDLQVLGDTCTISCTKEGVKFSVSGDLGSGNVLVRQNSAAEKDEEKVMIEMDEPVELTFALRYLNFFTKATSLGPTVILSMSPEVPVVVEYPIGETGHIKYYLAPKID 256          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A7R9WGG0_9STRA (Proliferating cell nuclear antigen n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9WGG0_9STRA)

HSP 1 Score: 348 bits (894), Expect = 1.790e-117
Identity = 171/256 (66.80%), Postives = 211/256 (82.42%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARL +G + K +IE++KDLV +AN++ S+  IS+QAMDSSHVSL ++ LR   FDH+R DR  +LG N  N SKILKC+GNDD +TL+AED  DSLT+MFES +Q RI+DFELKLMDIDSE LGIPDT+YK TI +PS EFQRIVRD+ V+G+TC I C K+GV+FSV GDLG G++ ++ NA+A+KEED V I+MEE VELTFALRYLN FTKAT LGP+V +SMSPDVP+VVEYPIE +G ++YYLAPKID
Sbjct:   50 MFEARLTQGRIFKSLIESIKDLVQDANLECSEDEISIQAMDSSHVSLVAVALRASGFDHYRCDRPLSLGFNSANLSKILKCSGNDDKITLKAEDNGDSLTLMFESGSQDRIADFELKLMDIDSEQLGIPDTEYKCTIKMPSTEFQRIVRDMQVLGDTCVISCTKEGVRFSVSGDLGTGNVLIRNNANAEKEEDQVLIDMEEPVELTFALRYLNFFTKATALGPSVIISMSPDVPIVVEYPIESSGEIKYYLAPKID 305          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: A0A7S0BXQ4_9STRA (Proliferating cell nuclear antigen n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXQ4_9STRA)

HSP 1 Score: 347 bits (889), Expect = 2.030e-117
Identity = 168/256 (65.62%), Postives = 213/256 (83.20%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARL +G +LK++++A+KDLV +ANIDVS+  +S+QAMDSSHVSL ++ LR  MFDH+R DR  +LG N  N SKILKCAGNDD++TL+AE++ ++LT+MFES +Q RI+DFELKLMDID E LGIPDT YK TI +PS EFQRI+RDL V+G+TC I C K+G+KFSV GD+G G++ ++QN S+DKEED+V I+M+E VELTFALRYLN FTKAT LG  V LSMSP+VP+VVEYPIE  G +++YLAPKID
Sbjct:    1 MFEARLTQGIILKQLVDAIKDLVQDANIDVSENELSIQAMDSSHVSLVAVSLREGMFDHYRCDRPISLGFNSQNLSKILKCAGNDDVITLKAEEEGENLTLMFESPSQDRIADFELKLMDIDGEQLGIPDTSYKTTIRMPSGEFQRIIRDLQVLGDTCIISCTKEGIKFSVSGDMGTGNVLIRQNTSSDKEEDHVIIDMDEPVELTFALRYLNFFTKATGLGKRVVLSMSPEVPIVVEYPIEDTGDIKFYLAPKID 256          
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Match: L1IQM8_GUITC (Proliferating cell nuclear antigen n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IQM8_GUITC)

HSP 1 Score: 346 bits (888), Expect = 2.510e-117
Identity = 169/256 (66.02%), Postives = 215/256 (83.98%), Query Frame = 1
Query:    1 MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSLMLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLTMMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRDLSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINMEESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYYLAPKID 768
            MFEARL +GSLLKK+IEA+++LVT+AN DVS +G+SLQAMD+SHVSL SL+LR D F+HFR DR+ +LG+N+ + +K+LKCA NDD +TL+AEDQ D+LT+MFES NQ RISDFE+KLMDIDSEHLGIPDT+YKAT+ + +AEFQRI+RDLS IG+T +I C K+ VKFSVEGD+G G++ ++ NA+ DKE++   I +EE V LTFALRYLN FTKATPL  TV+LSMSPDVP+V EY +   G +R++LAPKID
Sbjct:    1 MFEARLAQGSLLKKLIEAIRELVTDANFDVSTSGVSLQAMDTSHVSLVSLLLREDGFEHFRCDRSLSLGLNLASITKMLKCANNDDAITLKAEDQGDTLTLMFESPNQDRISDFEIKLMDIDSEHLGIPDTEYKATVKMSAAEFQRIMRDLSTIGDTVSISCTKEAVKFSVEGDIGQGNVIMRHNAAVDKEDEATIIELEEPVSLTFALRYLNLFTKATPLSSTVTLSMSPDVPLVTEYKVGDMGNIRFFLAPKID 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig875.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UVI1_9STRA9.210e-13374.71Proliferating cell nuclear antigen n=1 Tax=Fibroca... [more]
A0A812RGX4_SYMMI2.440e-12567.97Proliferating cell nuclear antigen n=1 Tax=Symbiod... [more]
A0A835ZEE1_9STRA4.010e-12469.53Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
W7TJJ6_9STRA2.230e-12370.04Proliferating cell nuclear antigen n=2 Tax=Monodop... [more]
D7FVX7_ECTSI3.280e-12369.92Proliferating cell nuclear antigen n=2 Tax=Ectocar... [more]
A0A835YRT1_9STRA7.660e-12267.97Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
B8BWU2_THAPS1.850e-12068.36Proliferating cell nuclear antigen n=1 Tax=Thalass... [more]
A0A7R9WGG0_9STRA1.790e-11766.80Proliferating cell nuclear antigen n=2 Tax=Odontel... [more]
A0A7S0BXQ4_9STRA2.030e-11765.63Proliferating cell nuclear antigen n=2 Tax=Probosc... [more]
L1IQM8_GUITC2.510e-11766.02Proliferating cell nuclear antigen n=2 Tax=Guillar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig875contigH-akashiwo_Contig875:102408..103735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVX7
Preferred namePCNA
PFAMsPCNA_C,PCNA_N
Model size878
Max annot lvl2759|Eukaryota
KEGG koko:K04802
KEGG Pathwayko03030,ko03410,ko03420,ko03430,ko04110,ko04530,ko05161,ko05166,map03030,map03410,map03420,map03430,map04110,map04530,map05161,map05166
KEGG ModuleM00295
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000082,GO:0000083,GO:0000122,GO:0000226,GO:0000228,GO:0000278,GO:0000302,GO:0000307,GO:0000700,GO:0000701,GO:0000723,GO:0000731,GO:0001101,GO:0001889,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003684,GO:0003690,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005652,GO:0005654,GO:0005657,GO:0005663,GO:0005694,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006277,GO:0006281,GO:0006282,GO:0006283,GO:0006284,GO:0006287,GO:0006289,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006355,GO:0006357,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006955,GO:0006959,GO:0006974,GO:0006977,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007304,GO:0007306,GO:0007307,GO:0007346,GO:0007507,GO:0007584,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009314,GO:0009410,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010927,GO:0010948,GO:0014070,GO:0014823,GO:0015630,GO:0016043,GO:0016070,GO:0016567,GO:0016604,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0019985,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022616,GO:0023052,GO:0030154,GO:0030234,GO:0030330,GO:0030331,GO:0030337,GO:0030703,GO:0030707,GO:0030855,GO:0030894,GO:0030971,GO:0030983,GO:0031099,GO:0031100,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031570,GO:0031571,GO:0031667,GO:0031960,GO:0031974,GO:0031981,GO:0032069,GO:0032070,GO:0032075,GO:0032077,GO:0032135,GO:0032139,GO:0032200,GO:0032201,GO:0032355,GO:0032404,GO:0032405,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0033683,GO:0033993,GO:0034399,GO:0034599,GO:0034614,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0035035,GO:0035257,GO:0035258,GO:0035556,GO:0035690,GO:0036211,GO:0042221,GO:0042276,GO:0042493,GO:0042542,GO:0042592,GO:0042698,GO:0042769,GO:0042770,GO:0042802,GO:0043085,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043596,GO:0043626,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044786,GO:0044796,GO:0044819,GO:0044843,GO:0044849,GO:0044877,GO:0045005,GO:0045739,GO:0045740,GO:0045786,GO:0045787,GO:0045892,GO:0045930,GO:0045934,GO:0045935,GO:0046483,GO:0046677,GO:0046686,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051276,GO:0051336,GO:0051345,GO:0051384,GO:0051427,GO:0051606,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060429,GO:0061008,GO:0061695,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070182,GO:0070206,GO:0070207,GO:0070301,GO:0070557,GO:0070647,GO:0070887,GO:0070987,GO:0071156,GO:0071158,GO:0071214,GO:0071236,GO:0071466,GO:0071478,GO:0071482,GO:0071548,GO:0071704,GO:0071840,GO:0071897,GO:0072331,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090304,GO:0090305,GO:0097159,GO:0097237,GO:0097327,GO:0097421,GO:0098772,GO:0104004,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902065,GO:1902400,GO:1902402,GO:1902403,GO:1902494,GO:1902554,GO:1902679,GO:1902806,GO:1902807,GO:1902850,GO:1902911,GO:1902990,GO:1903047,GO:1903506,GO:1903507,GO:1990234,GO:1990782,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2001020,GO:2001022,GO:2001141
Exons4
Evalue7.49e-125
EggNOG OGsCOG0592@1|root,KOG1636@2759|Eukaryota
Ec32 ortholog descriptionPCNA
Ec32 orthologEc-01_002530.1
DescriptionDNA polymerase processivity factor activity
Cds size777
COG categoryL
BRITEko00000,ko00001,ko00002,ko03032,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388020.6839294-UTR-H-akashiwo_Contig875:102407..1025081681388020.6839294-UTR-H-akashiwo_Contig875:102407..102508Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig875 102408..102508 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388020.6974618-CDS-H-akashiwo_Contig875:102508..1026561681388020.6974618-CDS-H-akashiwo_Contig875:102508..102656Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig875 102509..102656 -
1681388020.705384-CDS-H-akashiwo_Contig875:102845..1030021681388020.705384-CDS-H-akashiwo_Contig875:102845..103002Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig875 102846..103002 -
1681388020.7170906-CDS-H-akashiwo_Contig875:103154..1035121681388020.7170906-CDS-H-akashiwo_Contig875:103154..103512Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig875 103155..103512 -
1681388020.725646-CDS-H-akashiwo_Contig875:103621..1037351681388020.725646-CDS-H-akashiwo_Contig875:103621..103735Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig875 103622..103735 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig875.3.1prot_H-akashiwo_Contig875.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig875 102509..103735 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig875.3.1

>prot_H-akashiwo_Contig875.3.1 ID=prot_H-akashiwo_Contig875.3.1|Name=mRNA_H-akashiwo_Contig875.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=259bp
MFEARLIKGSLLKKIIEALKDLVTEANIDVSDTGISLQAMDSSHVSLCSL
MLRMDMFDHFRADRNSTLGINITNFSKILKCAGNDDIVTLRAEDQPDSLT
MMFESENQSRISDFELKLMDIDSEHLGIPDTDYKATISLPSAEFQRIVRD
LSVIGETCTIKCDKDGVKFSVEGDLGAGSITLKQNASADKEEDNVTINME
ESVELTFALRYLNSFTKATPLGPTVSLSMSPDVPVVVEYPIEGNGYVRYY
LAPKIDAI*
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mRNA from alignment at H-akashiwo_Contig875:102408..103735-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig875.3.1 ID=mRNA_H-akashiwo_Contig875.3.1|Name=mRNA_H-akashiwo_Contig875.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1328bp|location=Sequence derived from alignment at H-akashiwo_Contig875:102408..103735- (Heterosigma akashiwo CCMP452)
ATGTTTGAAGCTCGTCTGATCAAGGGCAGTCTTCTCAAGAAGATCATTGA GGCCTTGAAGGACCTCGTGACAGAAGCCAATATTGATGTTTCTGACACAG GGATCTCTTTGCAGGTAACGTAGACCACTGGTTAGCTTTTGGGGAGTGCA TTGCCATTCTCTTTCTTACTGAGTCACCTGCAATAACATCTTCGTTTTGG TTCCGTTTTTGTCCTAACTATAGGCTATGGACTCGTCACACGTGTCTCTT TGTTCTCTAATGCTGAGAATGGACATGTTCGATCACTTCAGAGCCGACAG AAACAGCACCCTGGGCATCAACATCACAAACTTCTCCAAGATATTAAAGT GTGCAGGCAATGATGACATTGTGACACTCCGGGCAGAAGACCAGCCCGAC AGCCTCACCATGATGTTCGAGAGTGAGAACCAGTCAAGAATTTCAGATTT TGAGCTTAAGTTAATGGACATCGACAGCGAGCACCTGGGTATTCCTGACA CAGACTACAAGGCCACAATCTCTCTTCCCTCTGCAGAGTTCCAACGAATC GTCAGAGATCTCTCTGTGATCGGCGAGACTTGTGAGTTCCAGCTCAAACT AACTTCCAACACATGCATACCCGCCACTTGCCCTTGCACACCCATGAATA TCCCCACCCAGTATGCAACCAGCATGTACTGCGCTTATAGCCTGCTCGCC CCCCTGCCCCCACCCCTCCTTCGGCCCCCGCAGGTACAATCAAGTGCGAC AAAGACGGGGTGAAGTTTTCCGTGGAGGGCGACCTGGGCGCGGGCAGCAT CACGCTGAAGCAGAATGCCTCGGCGGACAAGGAGGAGGACAACGTGACGA TCAACATGGAGGAGTCCGTGGAGCTGACCTTCGCGCTGCGGTGTGTGTCT GGCGCCCCACTGTAGATCACAGATGGGAGCTTGTTGCCTTCATCGCTGCT GTGCTATCTCTGTTCACCTAATACGTAGGCAGGCGAATTTCGGTGTTTCT AATGGCTCCGTGCGAATCAAGCATAACAGTGTGCAGATTATCTCCATCCT TCTTGCGAAACGTCGCTGCCCCCCCGCAGGTACCTGAACTCGTTCACCAA GGCCACGCCGCTGGGCCCCACGGTCTCCCTGAGCATGAGCCCGGACGTGC CCGTGGTGGTGGAGTACCCCATCGAGGGCAACGGCTACGTGCGGTACTAC CTGGCGCCCAAGATCGACGCCATTTAAACGCCGAGGGCTGAGGAGGATGG CCGCCGTCGCTGGCGGCGTTTGTTGTCGAGGGGGGGGGGCGGCGATTGCT GCTGGGAACGGTTCGGGGAATTTCTTTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig875:102408..103735-

>mRNA_H-akashiwo_Contig875.3.1 ID=mRNA_H-akashiwo_Contig875.3.1|Name=mRNA_H-akashiwo_Contig875.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=777bp|location=Sequence derived from alignment at H-akashiwo_Contig875:102408..103735- (Heterosigma akashiwo CCMP452)
ATGTTTGAAGCTCGTCTGATCAAGGGCAGTCTTCTCAAGAAGATCATTGA
GGCCTTGAAGGACCTCGTGACAGAAGCCAATATTGATGTTTCTGACACAG
GGATCTCTTTGCAGGCTATGGACTCGTCACACGTGTCTCTTTGTTCTCTA
ATGCTGAGAATGGACATGTTCGATCACTTCAGAGCCGACAGAAACAGCAC
CCTGGGCATCAACATCACAAACTTCTCCAAGATATTAAAGTGTGCAGGCA
ATGATGACATTGTGACACTCCGGGCAGAAGACCAGCCCGACAGCCTCACC
ATGATGTTCGAGAGTGAGAACCAGTCAAGAATTTCAGATTTTGAGCTTAA
GTTAATGGACATCGACAGCGAGCACCTGGGTATTCCTGACACAGACTACA
AGGCCACAATCTCTCTTCCCTCTGCAGAGTTCCAACGAATCGTCAGAGAT
CTCTCTGTGATCGGCGAGACTTGTACAATCAAGTGCGACAAAGACGGGGT
GAAGTTTTCCGTGGAGGGCGACCTGGGCGCGGGCAGCATCACGCTGAAGC
AGAATGCCTCGGCGGACAAGGAGGAGGACAACGTGACGATCAACATGGAG
GAGTCCGTGGAGCTGACCTTCGCGCTGCGGTACCTGAACTCGTTCACCAA
GGCCACGCCGCTGGGCCCCACGGTCTCCCTGAGCATGAGCCCGGACGTGC
CCGTGGTGGTGGAGTACCCCATCGAGGGCAACGGCTACGTGCGGTACTAC
CTGGCGCCCAAGATCGACGCCATTTAA
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