mRNA_H-akashiwo_Contig850.15.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: D7G5Q1_ECTSI (ATP-binding cassette, sub-family B, member 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q1_ECTSI) HSP 1 Score: 120 bits (300), Expect = 3.860e-28 Identity = 85/219 (38.81%), Postives = 119/219 (54.34%), Query Frame = 1 Query: 7 LEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELL--------RGAQGGKLDKKNGADSS-----SSLAEDLGMPFPQQ-------EALISSDQFVDDSSI--------------QLSFHNVSFQYPSRQAS-VLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 L+E+QG+AYG AR +G ++ + VLL GA V G+MTG+QL TF+FYT+FV +SFDVGDQ IQEALG G VFELL + GK ++ + S+ S++ E+ P +A + S ++ F +VSF YP+R VLD ++ +++ GEK A+VG SGGGKST+LRL+ R Y P Sbjct: 263 LQETQGIAYGVARVVIGWSQAILLGAVLLLGAGRVFDGRMTGQQLTTFVFYTQFVTSASFDVGDQ---IQEALGAGQKVFELLDREPIMTGQAKTEGKQSVEHSSSSTLTQHDSTVMEEHAPPLTNSVGSKGGGDADMPSXXXXXXXXXXXXXXXXXXXXXXGRVEFDSVSFGYPTRSGVLVLDGLNLTVRPGEKVAVVGSSGGGKSTILRLICRFYDP 478
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: A0A7S2HIK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HIK7_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.070e-28 Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 1 Query: 1 MALEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKL-DKKNGADSSSSLAEDLGMPFPQQEALISSDQFV--DDSSIQ----LSFHNVSFQYPSRQAS-VLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 +AL+E+QG+AYG R ++ L VLL G + AG++T QL +F+FY FV+ ++FDVGDQW KIQEALG G+ +F+LL K D N + ++ A L +A S + ++SS + + F V F YP+R+ +L ++ +K GE +VG SGGGKST+LRL+ LY P Sbjct: 319 LALQETQGVAYGLTRSLSVTSGLLVTLSVLLGGRQALTAGRLTAAQLTSFLFYATFVSGATFDVGDQWTKIQEALGAGTTIFDLLERKSTLKTADTHNSNSAPTTAAHHLSPEGGSLDASAESSTAMREEESSSEYDNRIRFEGVHFAYPTRKGQKILQGLNLDLKSGEVVGLVGGSGGGKSTVLRLLLHLYDP 512
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: A0A8J2SL18_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL18_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.070e-21 Identity = 65/183 (35.52%), Postives = 95/183 (51.91%), Query Frame = 1 Query: 7 LEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSLAEDLGMPFPQQEALISSDQFVDDSSIQLSFHNVSFQYPSRQAS-VLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLY 552 +++ GL YG +R ALG + LA + GA V +G + + +V F FY FV ++FDVGDQ A++++ALG G+A FEL R E + AL + D S ++ F ++ F YP+R S VL +S + GE+ A+VG SG GKSTL +L+ R Y Sbjct: 288 VQDRAGLVYGLSRVALGGCKGLAAVATMALGAKRVASGALAPDAMVRFAFYAAFVNGAAFDVGDQLARVEDALGAGAAAFELAR-------------------REPVWDGKAPPSALDAHDAPASPSEGRVEFDDIRFAYPARNESQVLRGVSVRVDPGERVALVGASGSGKSTLTKLLLRQY 451
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: B7G6L1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6L1_PHATC) HSP 1 Score: 99.0 bits (245), Expect = 9.130e-21 Identity = 64/184 (34.78%), Postives = 93/184 (50.54%), Query Frame = 1 Query: 7 LEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSLAEDLGMPFPQQEALISSDQFVDDSSIQLSFHNVSFQYPSRQASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 LEE+Q YG +F + + + L+L S + G + QL TFMFYT FV +SS +VGDQWAKIQ A+G ++VF+L+R +D + S L P ++ HN++ +Y + LD I I +G++ AIVG SG GKS++LR + R Y P Sbjct: 202 LEETQAWGYGTHKFVSDTLQGILQVLLLFACWSIGRTGGLPAAQLTTFMFYTNFVLESSNEVGDQWAKIQGAIGASTSVFDLIRRLALPSVDHSVKHLNGSELT-----PI-------------------INIHNMTLKYSAMDLPALDCIDLKIDEGDRVAIVGRSGSGKSSMLRAILRFYDP 361
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: W7TPP5_9STRA (Atp-binding cassette sub-family b member 9 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPP5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.330e-20 Identity = 68/183 (37.16%), Postives = 96/183 (52.46%), Query Frame = 1 Query: 13 ESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSLAEDLGMPF--PQQEALISSDQFVDDSSIQLSFHNVSFQYPSR-QASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLY 552 E+ YGA R A+ A+ VL G +G M+ +QL + +FY +FV ++SFDV DQ+++IQEALG + VF LL + A S L+ +P P A S + + F NVSF YP R +L ++ +I G++ A+VG SGGGKSTLLRL+ R Y Sbjct: 387 EAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALL---------DRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHY 560
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: A0A2E0W8X2_9MICO (ABC transporter ATP-binding protein (Fragment) n=1 Tax=Micrococcales bacterium TaxID=2026762 RepID=A0A2E0W8X2_9MICO) HSP 1 Score: 96.3 bits (238), Expect = 6.680e-20 Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 85 VLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSLAEDLGMPFPQQEALISSDQFVDDSSIQLSFHNVSFQYPSRQASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 VL G S VQ+G +T +LV+F+ Y++FVAD + DQ++++ + LG V LL ++ G +S ED + PQQ + ++L VSF YP R A +LDN+SF+I+ G A+VGPSG GKST+ +L+ RLY P Sbjct: 280 VLWFGGSQVQSGTLTAGELVSFLLYSRFVADGLATIVDQYSRLAQGLGASERVIALLDEP----TEEVVGGNS-----EDRNIIQPQQR----------NGHVEL--EQVSFTYPGRDALILDNVSFAIEPGSTVALVGPSGAGKSTIAQLIARLYDP 416
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: A0A4D9CVG1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG1_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.200e-19 Identity = 67/183 (36.61%), Postives = 95/183 (51.91%), Query Frame = 1 Query: 13 ESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSLAEDLGMPF--PQQEALISSDQFVDDSSIQLSFHNVSFQYPSR-QASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLY 552 E+ YGA R A+ A+ VL G +G M+ +QL + +FY +FV ++SFDV DQ+++IQEALG + VF LL + A S L+ +P P S + + F NVSF YP R +L ++ +I G++ A+VG SGGGKSTLLRL+ R Y Sbjct: 387 EAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALL---------DRTPAMSVKPLSPSPSLPTFGPSSRVTSSPPSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHY 560
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: A0A7S0C800_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C800_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.570e-19 Identity = 66/196 (33.67%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 7 LEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSL-------AEDLGMPFPQQEALIS--SDQFVDDSSIQ---LSFHNVSFQYPSRQASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 LEE Q AYG + +LL GK+ L+ F+ Y +FV +SS +VGDQWAKIQ ++G +VF+L+R ++ K D SS + + FP Q+ +S ++ ++ SS +SF N++ QY S ++ L ++S S G++ AIVG SG GKS++LR + R Y P Sbjct: 28 LEEVQAWAYGTHKVVSDVLEVSFKIGLLLTTWKLGVLGKLDTNNLIAFLSYVEFVLNSSNEVGDQWAKIQSSIGASESVFDLVR-----RVPKIRDPDPSSVMLNVTDVNGQLQSQTFPNQQQPLSKHANNEMESSSTTPPIISFQNMTLQYKSMTSNALTDLSASFNPGDRVAIVGRSGSGKSSILRSILRFYDP 218
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: A0A448Z8H0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8H0_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.880e-19 Identity = 61/184 (33.15%), Postives = 103/184 (55.98%), Query Frame = 1 Query: 7 LEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDKKNGADSSSSLAEDLGMPFPQQEALISSDQFVDDSSIQLSFHNVSFQYPSRQASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 LEE Q AYG+ +F + + + +L+ + +AG + L TFMFYT FV +SS +VGDQWAKIQ+A+G S+VF+L++ + D +++ A+D + + IS+ + V ++ +V+ +Y + L ++ +I G++ A+VG SG GKS++LR + R Y P Sbjct: 237 LEEVQAWAYGSHKFLSDTLQSVLQVALLVACWTVGKAGGLAATDLTTFMFYTGFVLESSNEVGDQWAKIQQAVGASSSVFDLIKRVPA--IHDPIPMDGTNNGADDA-VETKSESIGISTQRPV------IAMKDVTLEYDAMDRPALSGVTTNIYSGDRVALVGRSGSGKSSMLRTMLRFYDP 411
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Match: K0SD67_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD67_THAOC) HSP 1 Score: 94.7 bits (234), Expect = 3.000e-19 Identity = 62/185 (33.51%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 7 LEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFMFYTKFVADSSFDVGDQWAKIQEALGGGSAVFELLRGAQGGKLDK-KNGADSSSSLAEDLGMPFPQQEALISSDQFVDDSSIQLSFHNVSFQYPSRQASVLDNISFSIKKGEKCAIVGPSGGGKSTLLRLVGRLYAP 558 LEE Q AYG+ +F + + L+L + +AG + +L +F+FYT +V +SS +VGDQWAKIQ A+G + VF+L+R ++ K ++ + +++L E + LI+ +D + F +++ Y + + L ++ I +G+K AIVG SG GKS++LR V R Y P Sbjct: 359 LEEVQAWAYGSHKFVSDAVQAALQCLLLFSCWTLGRAGSIPAARLTSFLFYTNYVLESSNEVGDQWAKIQSAIGASTNVFDLIR-----RIPKVRDPLEVTNTLRE-----VNAAQNLING---ANDHRPVIKFSDLTVAYGTMEKPALKKVNLDISRGDKVAIVGRSGSGKSSMLRTVLRFYDP 530 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig850.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig850.15.1 >prot_H-akashiwo_Contig850.15.1 ID=prot_H-akashiwo_Contig850.15.1|Name=mRNA_H-akashiwo_Contig850.15.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=186bp MALEESQGLAYGAARFALGSARQLANALVLLRGASYVQAGKMTGEQLVTFback to top mRNA from alignment at H-akashiwo_Contig850:459306..461318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig850.15.1 ID=mRNA_H-akashiwo_Contig850.15.1|Name=mRNA_H-akashiwo_Contig850.15.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2013bp|location=Sequence derived from alignment at H-akashiwo_Contig850:459306..461318- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig850:459306..461318- >mRNA_H-akashiwo_Contig850.15.1 ID=mRNA_H-akashiwo_Contig850.15.1|Name=mRNA_H-akashiwo_Contig850.15.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=558bp|location=Sequence derived from alignment at H-akashiwo_Contig850:459306..461318- (Heterosigma akashiwo CCMP452)back to top |