mRNA_H-akashiwo_Contig85.7.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig85.7.1
Unique NamemRNA_H-akashiwo_Contig85.7.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 618 bits (1593), Expect = 2.930e-222
Identity = 299/340 (87.94%), Postives = 326/340 (95.88%), Query Frame = 1
Query:    1 RSGHESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESLRLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNFERHQQRVLHHGF 1020
            RSGHESCLY+ R+GG+ELMVAVYVDDLV+SGSS A+VS+FKQSLASKY LTDQGELTQILGIKVVRDKR+KCF+LSQTSFIKDAL KFGLDYLPAC TP+DHTVDLTPTPGFKAELSDAN+YRSMVGTLAWVANWTRPELAFTVHKLQRTQ +PEPKHFEA +RAFRYLKGTQSESLRLGGDLVLRAFSDSDFC+DR+DGKSVTGY+LFLGDAPI+WSSKLQGAVTTSTVEAEYLALRS+VKDIMWL R LL ++GCPQ EPTPVVEDNSAC+EWA+D+L++++NRHFHVSYHLAKEQVSLGTIRMF+IKTHDQVADI TKALNA NFERHQ RVLHHGF
Sbjct:   14 RSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWL-RSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQ-RVLHHGF 351          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 314 bits (805), Expect = 9.490e-104
Identity = 151/169 (89.35%), Postives = 163/169 (96.45%), Query Frame = 1
Query:    1 RSGHESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYL 507
            RSGHESCLY+ R+GG+ELMVAVYVDDLV+SGSS A+VS+FKQSLASKY+LTDQGELTQILGIKVVRDKR+KCF+LSQTSFIKDAL KFGLDYLPAC TPIDHTVDLTPTPGFKAELSDAN+YRSMVGTLAWVANWTRPELAFTVHKLQRTQ +PEPKHFEA +RAFRYL
Sbjct:  100 RSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 271 bits (694), Expect = 9.950e-80
Identity = 141/340 (41.47%), Postives = 215/340 (63.24%), Query Frame = 1
Query:    1 RSGHESCLYVRREG-GSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELS--DANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESLRLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNFERHQQRVLH 1011
            R+G++SC+Y +    G + +++VYVDD+V++ S  + +S  K++++  Y+++D GE+  ILGIKV RD+  +   LSQ SFI++A  KF +        P++  +D+         LS  +A  +RS+VGT+ W+A WT PE+A+++H L +    P      A+    RYL  T+ + + LGG L L A++D+DFCS+R  G+S +G+ +FLG +PIIWSS++Q  VT +T EAEY++LR++V D+MWL R LL  LG  +Q   P+ EDN ACI WA+D  +S+  RH HVSYH  KE V    I + ++ T  Q+AD+FTK L+  N  +   RVLH
Sbjct:  658 RNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKR-LLESLGY-KQGCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLH 995          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: UPI00098DD449 (uncharacterized protein LOC109818890 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI00098DD449)

HSP 1 Score: 223 bits (569), Expect = 1.380e-66
Identity = 122/327 (37.31%), Postives = 190/327 (58.10%), Query Frame = 1
Query:   10 HESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESLRLGG--DLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNF 984
            +E  LY++ +G   L+V +YVDDL+ +G++P++  +FK+ +  ++++TD G +   LGI+V +       +++Q S+ KD L KF LD      TP++  + L+     + E  D  +Y+S+VG+L ++   TRP++ + V  + R    P   H + A+R  RY+KGT S  L      D  L  +SDSD+  D  D KS +G+V ++GD    W SK Q  VT ST EAEY+A  S V   +WL R+LL +L  PQ EPT +  DN + I  A + +   +++H H  YH  +E +S   ++M ++KTHDQVADIFTK L  + F
Sbjct:   53 YEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEG--IFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWL-RNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVF 373          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RPT4_CAJCA)

HSP 1 Score: 223 bits (569), Expect = 8.410e-62
Identity = 122/327 (37.31%), Postives = 190/327 (58.10%), Query Frame = 1
Query:   10 HESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESLRLGG--DLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNF 984
            +E  LY++ +G   L+V +YVDDL+ +G++P++  +FK+ +  ++++TD G +   LGI+V +       +++Q S+ KD L KF LD      TP++  + L+     + E  D  +Y+S+VG+L ++   TRP++ + V  + R    P   H + A+R  RY+KGT S  L      D  L  +SDSD+  D  D KS +G+V ++GD    W SK Q  VT ST EAEY+A  S V   +WL R+LL +L  PQ EPT +  DN + I  A + +   +++H H  YH  +E +S   ++M ++KTHDQVADIFTK L  + F
Sbjct: 1009 YEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEG--IFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWL-RNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVF 1329          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A2U1QJ52_ARTAN (Uncharacterized protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QJ52_ARTAN)

HSP 1 Score: 221 bits (563), Expect = 3.440e-61
Identity = 121/334 (36.23%), Postives = 199/334 (59.58%), Query Frame = 1
Query:   13 ESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESL--RLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNFERHQQRVL 1008
            E  LY + E GS L+V +YVDDL+ +G+S +++ + K+S+  ++++TD G ++  LGI+V   + D+  ++SQ  + K+ L +FG+D      TPI+H    +   G   E  D+ +++S+VG+L ++   TRP++ F V  + R   +P  KH E A+R  RY+KGT    +      D  L  +SDSD+  ++ DG+S TG++ FLG+    WSSK Q  VT S+ EAEY+A  S V   +WL R +L +L   Q++ T +  DN + I+ A + +   +++H +  YH  +E ++   +R+   ++ DQVADIFTK LN K+F R  QR++
Sbjct:  743 EYALYEKFERGSILLVCLYVDDLIFTGNSQSMIDELKKSMTGEFEMTDIGLMSYYLGIEV--KQTDEGIFISQEGYAKEILKRFGMDKCNPVGTPIEHKAKPSKHDG--GEAVDSTLFKSLVGSLRYLT-CTRPDILFAVGLISRFMEEPTTKHLEIAKRILRYIKGTIDYGMFYSTSEDFKLVGYSDSDWAGNKDDGRSTTGFLFFLGNNAFTWSSKKQPIVTLSSCEAEYVATTSCVCHAIWL-RSMLKELHMEQEDATEIYVDNKSAIDLAKNPVYHDRSKHINTRYHFIRECIARKDVRVIHTRSEDQVADIFTKPLNEKDFSR--QRMM 1068          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A182GHD8_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GHD8_AEDAL)

HSP 1 Score: 207 bits (526), Expect = 4.690e-60
Identity = 115/328 (35.06%), Postives = 190/328 (57.93%), Query Frame = 1
Query:    1 RSGHESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESL---RLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNA 975
            RS H+ CLY R + G E+ V +YVDDL++ G  P  +   KQ L + + +TD GE+T  LG+++  D R     LSQ + ++  LT+F +       TP++  + L      +A    A+ YR ++G+L +V   TRP++ ++V  L R Q  P  +H+++ +R  R++KGT++  L   ++     L  + D+D+ SD  D KSV+G+  F+    + WSSK Q  V TS+ EAEY+AL S+V + +WL   +L DL      P  + EDN  CI  A +   S++++H  V +H  ++ +S G +R+ +++T DQ+AD+FTK ++A
Sbjct:   63 RSRHDYCLYTRIQDGDEIYVVLYVDDLLICGRKPETIVKLKQQLTAMFAMTDCGEVTHFLGMRLDYDVRRGRMRLSQEANVEKLLTRFEMVDCNPVKTPMEKGLQLA-----RAGDPTAHPYRELLGSLMYVMLCTRPDICYSVGFLGRFQQKPTTQHWQSLKRVVRFIKGTKARCLEYKQVRSAKPLVGYVDADWASDIEDRKSVSGFAFFVFGNLVSWSSKKQTTVATSSSEAEYIALSSAVSEAVWL-SGILDDLKLKNSSPVTIYEDNQGCIGMAKNCE-SKRSKHIDVKHHFVRDHISNGNVRIEYVRTEDQLADLFTKPMDA 383          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: UPI000BBE9EE8 (uncharacterized protein LOC111209564 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE9EE8)

HSP 1 Score: 207 bits (527), Expect = 7.860e-60
Identity = 115/327 (35.17%), Postives = 191/327 (58.41%), Query Frame = 1
Query:   10 HESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESL--RLGGDLVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNF 984
            +E  LY++ +    L+  +YVDDL+ +G++P +  DFK  +  ++++TD G ++  LGI+V +++     +++Q S+ K+ L KF +D      TP++  V L+     + E  D  +++S+VG+L ++   TRP++   V  + R    P   HF+AA+R  RY+KGT +  L   +  D  L  +SDSD+  D  D KS +G+V F+G+    W SK Q  VT ST EAEY+A  S V   +WL R+LL +L   Q+EPT +  +N + I  A + +   +++H    YH  +E V+   +++ ++KT+DQVADIFTK L  ++F
Sbjct:   91 YEHALYIKTQNNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLGIEVKQEENG--IFITQESYAKEVLKKFKMDDSNPVCTPMECGVKLSKEE--EGESVDPTLFKSLVGSLRYLT-CTRPDILHAVGVVSRYMEHPTTTHFKAAKRILRYIKGTINFGLYYSISDDYKLVGYSDSDWGGDVDDRKSTSGFVFFIGEIAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWL-RNLLKELNLTQEEPTKIFVNNRSAIALAKNPVFHDRSKHIDTRYHYIRECVTKMDVQLEYVKTNDQVADIFTKPLKREDF 411          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.040e-59
Identity = 116/328 (35.37%), Postives = 180/328 (54.88%), Query Frame = 1
Query:   13 ESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLT----PTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESLRLGGDLV--LRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAK 978
            + C+YV    G    + +YVDDL+++    A ++  K  +   + L D G +  ILGI+V  D  +K   L Q  +I D + +F         TPID ++ +T    P    +  +     +RS++G+L+++A  TRP++A  V +L R   +P  +H++AA +  RYLKGT++  +  GG +   L A+SD+D+ SDR D +SV+G VL L  AP++W +  Q  V  ST EAEY+AL   VK+ MW  R LL +LG  Q+  T + EDN   I  A +     + +H  + YH  +E++  G I + +I T +QVAD  TK L  K
Sbjct:   52 DPCIYVSDMQGGRCFICLYVDDLLIASPDMATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWA-RLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGLPKK 378          
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Match: A0A2N9GDZ1_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GDZ1_FAGSY)

HSP 1 Score: 207 bits (526), Expect = 7.600e-59
Identity = 114/329 (34.65%), Postives = 181/329 (55.02%), Query Frame = 1
Query:    4 SGHESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDLTDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPIDHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRTQNDPEPKHFEAAERAFRYLKGTQSESLRLGGD--LVLRAFSDSDFCSDRIDGKSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRHLLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADIFTKALNAKNF 984
            S H++ L++RR     +++ +YVDD++++G   + +SDFK  L  ++++ D G L+  LG++V  D     +YLSQ  +  D L++ GL      +TP++    LTP  G    LSDA +YR +VG+L ++   TRP++A  VH + +  + P   H+ A     RY+KGT    L       L L A+SD+D+  D  D +S TG+  FLGD+ I W SK Q  V+ S+ EAEY AL  +  +++  LR LL D+G     PT +  DN + I+ A + +   + +H  +  HL +  +S G + +  + + DQ ADIFTK      F
Sbjct:  178 SSHDTALFIRRSDKGMILLLLYVDDMIITGDDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTG--YYLSQAKYASDLLSRAGLTDTKVVSTPLEMNARLTPLDG--TPLSDATLYRQLVGSLVYLTV-TRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLDLCAYSDADWAGDPTDRRSTTGFCFFLGDSLISWRSKKQHIVSRSSTEAEYRALADTTSELL-ALRWLLEDMGVTHSSPTVIHCDNRSAIQIAHNDVFHERTKHIEIDCHLVRHHLSAGILHLLPVSSSDQTADIFTKTFPPGRF 500          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig85.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK2.930e-22287.94Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK9.490e-10489.35Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK9.950e-8041.47Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
UPI00098DD4491.380e-6637.31uncharacterized protein LOC109818890 n=1 Tax=Cajan... [more]
A0A151RPT4_CAJCA8.410e-6237.31Retrovirus-related Pol polyprotein from transposon... [more]
A0A2U1QJ52_ARTAN3.440e-6136.23Uncharacterized protein n=1 Tax=Artemisia annua Ta... [more]
A0A182GHD8_AEDAL4.690e-6035.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000BBE9EE87.860e-6035.17uncharacterized protein LOC111209564 n=1 Tax=Brass... [more]
A0A6A3JMT1_9STRA4.040e-5935.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9GDZ1_FAGSY7.600e-5934.65Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig85contigH-akashiwo_Contig85:618885..619913 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog164328.Phyra75833
Model size1029
Max annot lvl164328.Phyra75833|-
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.23e-55
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3Q8Z1@4776|Peronosporales
Descriptiontransposition, RNA-mediated
Cds size1029
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388011.2820697-CDS-H-akashiwo_Contig85:618884..6199131681388011.2820697-CDS-H-akashiwo_Contig85:618884..619913Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig85 618885..619913 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig85.7.1prot_H-akashiwo_Contig85.7.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig85 618885..619913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig85.7.1

>prot_H-akashiwo_Contig85.7.1 ID=prot_H-akashiwo_Contig85.7.1|Name=mRNA_H-akashiwo_Contig85.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=343bp
RSGHESCLYVRREGGSELMVAVYVDDLVVSGSSPALVSDFKQSLASKYDL
TDQGELTQILGIKVVRDKRDKCFYLSQTSFIKDALTKFGLDYLPACATPI
DHTVDLTPTPGFKAELSDANMYRSMVGTLAWVANWTRPELAFTVHKLQRT
QNDPEPKHFEAAERAFRYLKGTQSESLRLGGDLVLRAFSDSDFCSDRIDG
KSVTGYVLFLGDAPIIWSSKLQGAVTTSTVEAEYLALRSSVKDIMWLLRH
LLADLGCPQQEPTPVVEDNSACIEWASDLLISRKNRHFHVSYHLAKEQVS
LGTIRMFFIKTHDQVADIFTKALNAKNFERHQQRVLHHGFSA*
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mRNA from alignment at H-akashiwo_Contig85:618885..619913+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig85.7.1 ID=mRNA_H-akashiwo_Contig85.7.1|Name=mRNA_H-akashiwo_Contig85.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1029bp|location=Sequence derived from alignment at H-akashiwo_Contig85:618885..619913+ (Heterosigma akashiwo CCMP452)
CGCAGCGGGCATGAGTCCTGCTTGTACGTTCGTCGCGAAGGGGGCAGTGA GTTGATGGTAGCTGTGTACGTTGATGATCTAGTGGTTAGTGGCAGCTCTC CGGCTCTTGTCTCTGATTTCAAGCAATCTCTTGCGTCCAAGTACGATCTC ACCGATCAGGGGGAGCTTACTCAAATCCTCGGCATCAAGGTCGTTCGGGA CAAGCGCGACAAGTGCTTTTATCTCTCTCAAACCTCTTTCATTAAGGACG CGCTCACCAAGTTCGGGCTTGATTATCTGCCTGCGTGCGCGACGCCTATA GATCACACTGTGGATCTGACGCCTACCCCTGGCTTCAAGGCCGAACTCTC TGACGCGAATATGTACAGGTCTATGGTTGGTACGCTAGCCTGGGTTGCGA ACTGGACGAGGCCGGAGCTGGCTTTTACGGTTCACAAGCTTCAGCGCACT CAGAATGACCCGGAACCCAAGCATTTCGAGGCGGCCGAGCGTGCATTTCG TTATCTTAAGGGTACTCAGTCTGAATCGTTGAGGCTGGGTGGTGATCTGG TGCTACGTGCATTCTCTGATTCGGATTTCTGCTCTGACCGTATTGATGGC AAATCTGTTACGGGCTACGTTCTGTTTCTGGGTGACGCGCCTATCATTTG GTCCTCAAAGCTTCAAGGGGCAGTCACTACCTCCACAGTGGAAGCGGAGT ATCTCGCTCTTCGGTCATCAGTCAAAGACATCATGTGGCTCCTCCGCCAT CTTCTTGCTGATCTGGGGTGCCCCCAGCAGGAGCCTACTCCCGTTGTAGA GGACAATAGTGCCTGCATTGAGTGGGCAAGTGACTTGTTGATCTCCAGAA AGAATAGGCATTTCCATGTGTCCTATCATCTTGCTAAGGAGCAGGTGAGC CTTGGGACTATCAGGATGTTCTTCATTAAGACTCATGACCAAGTGGCTGA TATTTTTACCAAAGCTCTCAATGCAAAAAATTTTGAAAGGCACCAGCAGA GGGTGCTGCATCATGGTTTCAGTGCCTGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig85:618885..619913+

>mRNA_H-akashiwo_Contig85.7.1 ID=mRNA_H-akashiwo_Contig85.7.1|Name=mRNA_H-akashiwo_Contig85.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1029bp|location=Sequence derived from alignment at H-akashiwo_Contig85:618885..619913+ (Heterosigma akashiwo CCMP452)
CGCAGCGGGCATGAGTCCTGCTTGTACGTTCGTCGCGAAGGGGGCAGTGA
GTTGATGGTAGCTGTGTACGTTGATGATCTAGTGGTTAGTGGCAGCTCTC
CGGCTCTTGTCTCTGATTTCAAGCAATCTCTTGCGTCCAAGTACGATCTC
ACCGATCAGGGGGAGCTTACTCAAATCCTCGGCATCAAGGTCGTTCGGGA
CAAGCGCGACAAGTGCTTTTATCTCTCTCAAACCTCTTTCATTAAGGACG
CGCTCACCAAGTTCGGGCTTGATTATCTGCCTGCGTGCGCGACGCCTATA
GATCACACTGTGGATCTGACGCCTACCCCTGGCTTCAAGGCCGAACTCTC
TGACGCGAATATGTACAGGTCTATGGTTGGTACGCTAGCCTGGGTTGCGA
ACTGGACGAGGCCGGAGCTGGCTTTTACGGTTCACAAGCTTCAGCGCACT
CAGAATGACCCGGAACCCAAGCATTTCGAGGCGGCCGAGCGTGCATTTCG
TTATCTTAAGGGTACTCAGTCTGAATCGTTGAGGCTGGGTGGTGATCTGG
TGCTACGTGCATTCTCTGATTCGGATTTCTGCTCTGACCGTATTGATGGC
AAATCTGTTACGGGCTACGTTCTGTTTCTGGGTGACGCGCCTATCATTTG
GTCCTCAAAGCTTCAAGGGGCAGTCACTACCTCCACAGTGGAAGCGGAGT
ATCTCGCTCTTCGGTCATCAGTCAAAGACATCATGTGGCTCCTCCGCCAT
CTTCTTGCTGATCTGGGGTGCCCCCAGCAGGAGCCTACTCCCGTTGTAGA
GGACAATAGTGCCTGCATTGAGTGGGCAAGTGACTTGTTGATCTCCAGAA
AGAATAGGCATTTCCATGTGTCCTATCATCTTGCTAAGGAGCAGGTGAGC
CTTGGGACTATCAGGATGTTCTTCATTAAGACTCATGACCAAGTGGCTGA
TATTTTTACCAAAGCTCTCAATGCAAAAAATTTTGAAAGGCACCAGCAGA
GGGTGCTGCATCATGGTTTCAGTGCCTGA
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