mRNA_H-akashiwo_Contig849.6.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 347 bits (889), Expect = 1.300e-114 Identity = 174/343 (50.73%), Postives = 235/343 (68.51%), Query Frame = 1 Query: 112 LHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINRFRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKSFE 1140 LH L GF RS ++ C+Y+ + G V +YVDD+VI+ + V+ K +L KY +TD G+L LG+K+ R+ K H+SQ+ FIKDAL KFG D+ P KTP+D T+DL+ ++A D N +RSMVGTL+W+A W+ PE++F V+KLQR PE KHF A R F+YLKG+ ++S++LGG +LRA+ D+DF C DR+DGKSVTGY I+FLGD+PIVW+S+LQ +VTT T EAEYLAL KD+MWLR LL E+G Q +PT V EDN+AC+ WA ++ V ++NRH HV+YH +E V I + YI T +QV D+ TKALN +FE Sbjct: 3 LHDHLESL-GFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDF-CNDRVDGKSVTGY-ILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPV-VEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 341
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 313 bits (802), Expect = 1.210e-94 Identity = 163/378 (43.12%), Postives = 247/378 (65.34%), Query Frame = 1 Query: 1 MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDA-VTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEY--RANEDDINRFRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALN 1125 M+QPEG+ P V KLKKS LYGLKQ+P+CWY NL+ L + G+TR+ YD C+Y + T +++YVDDIV+AS+D ++ +K + Y ++D G++E+ LG+K+ R+ +TI +SQ FI++A KF P P++ +D+++N + R + + +FRS+VGT++W+A W+ PE++++++ L + P A AA+ + +YL + +K + LGG L AY DADF C++R G+S +G+ I FLG SPI+W+SR+Q VT TTEAEY++L DVMWL+ LL LG+KQ EDN ACI+WA + TV++ RH+HV+YHY +E+VQ EIEVKY++T Q+ D+FTK L+ Sbjct: 611 MKQPEGYEVPGMEHKVLKLKKS-LYGLKQAPKCWYQNLNGFLLQ-QGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADF-CSERHKGRSRSGFAI-FLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ--GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 243 bits (619), Expect = 2.450e-73 Identity = 140/377 (37.14%), Postives = 226/377 (59.95%), Query Frame = 1 Query: 22 RDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANED-DINR---FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134 RD + D V +L KS LYGLKQ+ R W +++ L E GF ++ D CIY+ + ++ +YVDD++IAS D T+ +K ++ +++ D G + LG++++ ++ +KT+ + Q ++I D + +F P+ TP+D ++ ++ + E+ I R FRS++G+LS++A + P+I+ AV++L R P +H+ AA ++ +YLKG+ N + GG L AY DAD+ +DR D +SV+G ++ G +P+VW + QK+V TTEAEY+AL C K+ MW R LL LG KQ TT++E DN I+ A + +H+ + YHY+RE + +IE+KYINT EQV D TK L +K+ Sbjct: 8 RDTQAGDLVCRLHKS-LYGLKQAARVWNQTINTRLAEI-GFVSTDADPCIYVSDMQGGRCFICLYVDDLLIASPDMATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWG-SDRDDRRSVSGTVLMLFG-APVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHE-DNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGLPKKT 379
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA) HSP 1 Score: 243 bits (619), Expect = 2.670e-73 Identity = 140/390 (35.90%), Postives = 226/390 (57.95%), Query Frame = 1 Query: 1 MEQPEGFR------DPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134 ME PEG R + E D V + SLYGLKQ+ R W + ++ GF ++ D C+Y R G+ V +YVDD++IAS +A++KA + +K+RI D G+ LG++I+ ++ ++T+ +SQ + + + KFG ++ P TP++P + L+ E + ED +RS+VG+L ++A + P+IS AV KL R P KH+ A +V +YL + + I G GT L AY DAD+ +R D +SV+G ++ G +P+VW S QK+V +TEAEY+AL +C K+ +W+R LL ++G +Q+ TV EDN ++ A + +H+ + YH++RE V NE+E++Y++T Q+ D TK L+ K+ Sbjct: 1 MELPEGLRGILELAEAEGKDDVVCMLLQSLYGLKQASRVWNETIDKHIKSM-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADW-AGNRDDRRSVSGMLLMMCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLNDIGAEQVG-ATVRYEDNQGAMALAKNVGYQAHTKHIDIRYHFIREKVVINEVELEYVDTKNQLADFMTKGLSSKT 386
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A3HAR6_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HAR6_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.450e-73 Identity = 138/390 (35.38%), Postives = 228/390 (58.46%), Query Frame = 1 Query: 1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134 ME PEG R+ E D V + SLYGLKQ+ R W + L+ GF ++ D C+Y R G+ V +YVDD++IAS +A++KA + +K+RI D G+ L ++I+ ++ ++T+ +SQ + + + KFG ++ P TP++P + L+ + E + ED +RS+VG+L ++A + P+IS AV KL R P KH+ A +V +YL + + I G GT L AY DAD+ +R D +SV+G ++ G +P+VW S QK+V +TEAEY+AL +C K+ +W+R LL ++G +Q+ T + E DN ++ A + + +H+ + YH++RE V +E+E++Y++T+ Q+ D TK L+ K+ Sbjct: 32 MELPEGLRELLELAEAEGEDDVVCMLLQSLYGLKQTSRVWNETIDKHLKSV-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDTGRARFILSIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKSDEPQTEEDKAKMKSRPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWV-GNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALISTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYE-DNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELEYVDTNNQLADFMTKGLSSKT 417
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.370e-71 Identity = 137/390 (35.13%), Postives = 226/390 (57.95%), Query Frame = 1 Query: 1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134 ME PEG R+ E D V + SLYGLKQ+ R W + L+ GF ++ D C+Y R G+ V +YVDD++IAS +A++KA + +K+RI D G+ LG++I+ ++ ++T+ +SQ + + + KFG ++ P TP++P + L+ E + ED +RS+VG+L ++A + P+IS AV KL R P KH+ A +V +YL + + I G GT L AY DA++ +R D +SV+G ++ G +P+VW S QK+V +TEAEY+AL +C K+ +W+R LL ++G +Q+ + E DN ++ A + + +H+ + YH++RE V +E+E++Y++T Q+ D TK L+ K+ Sbjct: 32 MELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSM-GFEPADADPCVYTRGEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPWLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDANW-AGNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGAMVIYE-DNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGLSSKT 417
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A3L5P5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5P5_9STRA) HSP 1 Score: 235 bits (600), Expect = 4.230e-70 Identity = 137/391 (35.04%), Postives = 225/391 (57.54%), Query Frame = 1 Query: 1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR-----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134 ME PEG R+ E D+V SLYGLKQ+ R W + L+ GF ++ D C+Y R G+ V +YVDD++IAS +A++KA + +K+RI D G+ LG++I+ ++ ++T+ + Q + + + KFG ++ P P++P + L+ E + E+DI++ +RS+VG+L ++A + P+IS AV KL R P KH+ A +V +YL + + I G GT L AY DAD+ +R D +SV+G ++ G +P+VW S QK+V +TEAEY+AL +C K+ +W+R LL ++G +Q+ T + E DN ++ A + + +H+ + YH++ E V NE+E +Y+ T Q+ D TK L+ + Sbjct: 32 MELPEGLRELLDLAEAEGEDNVVCTLPQSLYGLKQASRVWNETIDKRLKSM-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGIIQKAYTESIIKKFGQENAKPCLAPLEPGVQLTKGDEPQT-EEDIDKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADW-AGNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYE-DNQGAMTLAKNVGYQARTKHIDIRYHFIPEKVVSNEVEQEYVATKNQLADFMTKGLSSNT 417
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A4DYE5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DYE5_9STRA) HSP 1 Score: 235 bits (600), Expect = 4.230e-70 Identity = 137/390 (35.13%), Postives = 221/390 (56.67%), Query Frame = 1 Query: 1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134 ME PEG R+ E D V + SLYGLKQ+ R W + L+ GF ++ D C+Y R G+ V +YVDD++IAS + +KA + +K+RI D G+ LG++I+ +L ++T+ +SQ + + KFG ++ P TP++P + + E + E+ +RS+VG+L ++A P+IS AV KL R P KH+ A V +YL + + I G GT L AY DA++ +R D +SV+G ++ G +P+VW S QK+V +TEAEY+AL +C K+ +W+R LL ++G +Q+ T + E DN ++ A + + +H+ + YH++RE V NE+E++Y++T Q+ D TK L+ K+ Sbjct: 32 MELPEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSM-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIVPVKAGIAEKFRIKDLGRARFILGIEIDYDLERRTLSISQKACTESIIEKFGQENAKPCLTPLEPGVQFTEGDEPQTEENKTKMMSKPYRSLVGSLIYLACGMRPDISVAVAKLSRFLENPCEKHWDAGIAVVRYLLKTNDVGIVCDGLLGTQLEAYSDANW-AGNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYE-DNQGAMALAKNVGYHARTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADFMTKGLSSKT 417
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A2N9FIJ5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FIJ5_FAGSY) HSP 1 Score: 247 bits (631), Expect = 4.260e-70 Identity = 148/385 (38.44%), Postives = 231/385 (60.00%), Query Frame = 1 Query: 1 MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDI----NRFRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKL-GGGTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELG-FKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKSF 1137 M QP GF DP PDHV KL+KS LYGLKQ+PR W+ S L GF S D +++ + G V Y+ +YVDDI++ N VA+L A L + + + D G L FLGL+I+ N + + V Q ++I D L+KF +C PA TP S++++ + + DD+ ++RS+VG L + AT++ P+I++AVN++ + + P + H AA R+ +YL+G+ + I+ G + L A+ D+D+ D D +S TG VFLG++PI W S+ Q +V+ +TEAEY AL A ++ WLR +L +LG + PT DNT+ I+ A+ + +H+ V+YH+VRE V + ++ + +I+T +Q+ DLFTK L + F Sbjct: 668 MIQPPGFVDPTHPDHVCKLQKS-LYGLKQAPRAWFERFTSHLLTI-GFVASTADPSLFVLRTGSTVLYLLLYVDDIILTGNSSSAVASLIAQLAETFELKDLGPLRFFLGLQIDYN--RTGLFVHQRKYISDLLLKFNMTNCKPASTP------FSISQKLQPSTDDVLPDPTQYRSLVGALQY-ATFTRPDITYAVNQVCQYMHKPNSTHLVAAKRILRYLQGTLHLGIRFQSGSSSLTAFTDSDW-AGDPYDRRSTTGI-TVFLGNNPITWVSKKQHTVSRSSTEAEYRALATGAAELAWLRQVLCDLGVYLPTAPTMWC--DNTSAIALASNPVFHSRTKHIEVDYHFVRERVVRGDLHLHFISTEDQLADLFTKPLTTQRF 1037
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM) HSP 1 Score: 234 bits (598), Expect = 7.540e-70 Identity = 131/387 (33.85%), Postives = 215/387 (55.56%), Query Frame = 1 Query: 1 MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNK-EYRANEDDINR---FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILR--AYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKSFEI 1143 M QP+G+ D + PDHV KLK+S LYGLKQSPR W + + + GF + E D C+Y+++ G + +V +YVDD+V+AS++D + K L K++ +TD G+LE FLG++I + V Q++F+K L KFG P KTP DP + L+ N E +D + +RS+VG L ++ + P+++ AV L + + P H+ A RV +YL+ + ++ L Y DAD+ I+ + T Y + I W S+ Q++V +TEAEY+AL E ++ +WL+ L ELG EDN I+ A ++ +H+ + YH+VRE V+ ++ ++Y++T++ + D+ TKA+ F++ Sbjct: 18 MAQPDGYVDEDHPDHVCKLKRS-LYGLKQSPRMWNQTIDDFMLKL-GFKKCESDHCVYLKRDGQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDSLGMCGYSDADW--AGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQV 400 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig849.6.1 >prot_H-akashiwo_Contig849.6.1 ID=prot_H-akashiwo_Contig849.6.1|Name=mRNA_H-akashiwo_Contig849.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=382bp MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRback to top mRNA from alignment at H-akashiwo_Contig849:162423..163568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig849.6.1 ID=mRNA_H-akashiwo_Contig849.6.1|Name=mRNA_H-akashiwo_Contig849.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1146bp|location=Sequence derived from alignment at H-akashiwo_Contig849:162423..163568+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig849:162423..163568+ >mRNA_H-akashiwo_Contig849.6.1 ID=mRNA_H-akashiwo_Contig849.6.1|Name=mRNA_H-akashiwo_Contig849.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1146bp|location=Sequence derived from alignment at H-akashiwo_Contig849:162423..163568+ (Heterosigma akashiwo CCMP452)back to top |