mRNA_H-akashiwo_Contig849.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig849.6.1
Unique NamemRNA_H-akashiwo_Contig849.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 347 bits (889), Expect = 1.300e-114
Identity = 174/343 (50.73%), Postives = 235/343 (68.51%), Query Frame = 1
Query:  112 LHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINRFRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKSFE 1140
            LH  L    GF RS ++ C+Y+ + G     V +YVDD+VI+ +    V+  K +L  KY +TD G+L   LG+K+ R+   K  H+SQ+ FIKDAL KFG D+ P  KTP+D T+DL+    ++A   D N +RSMVGTL+W+A W+ PE++F V+KLQR    PE KHF A  R F+YLKG+ ++S++LGG  +LRA+ D+DF C DR+DGKSVTGY I+FLGD+PIVW+S+LQ +VTT T EAEYLAL    KD+MWLR LL E+G  Q +PT V  EDN+AC+ WA ++ V ++NRH HV+YH  +E V    I + YI T +QV D+ TKALN  +FE
Sbjct:    3 LHDHLESL-GFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDF-CNDRVDGKSVTGY-ILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPV-VEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFE 341          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 313 bits (802), Expect = 1.210e-94
Identity = 163/378 (43.12%), Postives = 247/378 (65.34%), Query Frame = 1
Query:    1 MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDA-VTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEY--RANEDDINRFRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALN 1125
            M+QPEG+  P     V KLKKS LYGLKQ+P+CWY NL+  L +  G+TR+ YD C+Y +       T +++YVDDIV+AS+D   ++ +K  +   Y ++D G++E+ LG+K+ R+   +TI +SQ  FI++A  KF      P   P++  +D+++N +   R +  +  +FRS+VGT++W+A W+ PE++++++ L +    P A   AA+  + +YL  + +K + LGG   L AY DADF C++R  G+S +G+ I FLG SPI+W+SR+Q  VT  TTEAEY++L     DVMWL+ LL  LG+KQ        EDN ACI+WA + TV++  RH+HV+YHY +E+VQ  EIEVKY++T  Q+ D+FTK L+
Sbjct:  611 MKQPEGYEVPGMEHKVLKLKKS-LYGLKQAPKCWYQNLNGFLLQ-QGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADF-CSERHKGRSRSGFAI-FLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ--GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.450e-73
Identity = 140/377 (37.14%), Postives = 226/377 (59.95%), Query Frame = 1
Query:   22 RDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANED-DINR---FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134
            RD +  D V +L KS LYGLKQ+ R W   +++ L E  GF  ++ D CIY+  +     ++ +YVDD++IAS D  T+  +K  ++  +++ D G +   LG++++ ++ +KT+ + Q ++I D + +F      P+ TP+D ++ ++   +    E+  I R   FRS++G+LS++A  + P+I+ AV++L R    P  +H+ AA ++ +YLKG+ N  +  GG     L AY DAD+  +DR D +SV+G  ++  G +P+VW +  QK+V   TTEAEY+AL  C K+ MW R LL  LG KQ   TT++E DN   I+ A       + +H+ + YHY+RE +   +IE+KYINT EQV D  TK L +K+
Sbjct:    8 RDTQAGDLVCRLHKS-LYGLKQAARVWNQTINTRLAEI-GFVSTDADPCIYVSDMQGGRCFICLYVDDLLIASPDMATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWG-SDRDDRRSVSGTVLMLFG-APVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHE-DNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGLPKKT 379          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.670e-73
Identity = 140/390 (35.90%), Postives = 226/390 (57.95%), Query Frame = 1
Query:    1 MEQPEGFR------DPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134
            ME PEG R      + E  D V  +   SLYGLKQ+ R W   +   ++   GF  ++ D C+Y R  G+    V +YVDD++IAS     +A++KA + +K+RI D G+    LG++I+ ++ ++T+ +SQ  + +  + KFG ++  P  TP++P + L+   E +  ED        +RS+VG+L ++A  + P+IS AV KL R    P  KH+ A  +V +YL  + +  I   G  GT L AY DAD+   +R D +SV+G  ++  G +P+VW S  QK+V   +TEAEY+AL +C K+ +W+R LL ++G +Q+   TV  EDN   ++ A  +      +H+ + YH++RE V  NE+E++Y++T  Q+ D  TK L+ K+
Sbjct:    1 MELPEGLRGILELAEAEGKDDVVCMLLQSLYGLKQASRVWNETIDKHIKSM-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADW-AGNRDDRRSVSGMLLMMCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLNDIGAEQVG-ATVRYEDNQGAMALAKNVGYQAHTKHIDIRYHFIREKVVINEVELEYVDTKNQLADFMTKGLSSKT 386          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A3HAR6_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HAR6_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.450e-73
Identity = 138/390 (35.38%), Postives = 228/390 (58.46%), Query Frame = 1
Query:    1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134
            ME PEG R+       E  D V  +   SLYGLKQ+ R W   +   L+   GF  ++ D C+Y R  G+    V +YVDD++IAS     +A++KA + +K+RI D G+    L ++I+ ++ ++T+ +SQ  + +  + KFG ++  P  TP++P + L+ + E +  ED        +RS+VG+L ++A  + P+IS AV KL R    P  KH+ A  +V +YL  + +  I   G  GT L AY DAD+   +R D +SV+G  ++  G +P+VW S  QK+V   +TEAEY+AL +C K+ +W+R LL ++G +Q+  T + E DN   ++ A  +    + +H+ + YH++RE V  +E+E++Y++T+ Q+ D  TK L+ K+
Sbjct:   32 MELPEGLRELLELAEAEGEDDVVCMLLQSLYGLKQTSRVWNETIDKHLKSV-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDTGRARFILSIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKSDEPQTEEDKAKMKSRPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWV-GNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALISTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYE-DNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELEYVDTNNQLADFMTKGLSSKT 417          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.370e-71
Identity = 137/390 (35.13%), Postives = 226/390 (57.95%), Query Frame = 1
Query:    1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134
            ME PEG R+       E  D V  +   SLYGLKQ+ R W   +   L+   GF  ++ D C+Y R  G+    V +YVDD++IAS     +A++KA + +K+RI D G+    LG++I+ ++ ++T+ +SQ  + +  + KFG ++  P  TP++P + L+   E +  ED        +RS+VG+L ++A  + P+IS AV KL R    P  KH+ A  +V +YL  + +  I   G  GT L AY DA++   +R D +SV+G  ++  G +P+VW S  QK+V   +TEAEY+AL +C K+ +W+R LL ++G +Q+    + E DN   ++ A  +    + +H+ + YH++RE V  +E+E++Y++T  Q+ D  TK L+ K+
Sbjct:   32 MELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSM-GFEPADADPCVYTRGEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPWLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDANW-AGNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGAMVIYE-DNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGLSSKT 417          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A3L5P5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5P5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 4.230e-70
Identity = 137/391 (35.04%), Postives = 225/391 (57.54%), Query Frame = 1
Query:    1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR-----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134
            ME PEG R+       E  D+V      SLYGLKQ+ R W   +   L+   GF  ++ D C+Y R  G+    V +YVDD++IAS     +A++KA + +K+RI D G+    LG++I+ ++ ++T+ + Q  + +  + KFG ++  P   P++P + L+   E +  E+DI++     +RS+VG+L ++A  + P+IS AV KL R    P  KH+ A  +V +YL  + +  I   G  GT L AY DAD+   +R D +SV+G  ++  G +P+VW S  QK+V   +TEAEY+AL +C K+ +W+R LL ++G +Q+  T + E DN   ++ A  +    + +H+ + YH++ E V  NE+E +Y+ T  Q+ D  TK L+  +
Sbjct:   32 MELPEGLRELLDLAEAEGEDNVVCTLPQSLYGLKQASRVWNETIDKRLKSM-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGIIQKAYTESIIKKFGQENAKPCLAPLEPGVQLTKGDEPQT-EEDIDKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADW-AGNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYE-DNQGAMTLAKNVGYQARTKHIDIRYHFIPEKVVSNEVEQEYVATKNQLADFMTKGLSSNT 417          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A6A4DYE5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DYE5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 4.230e-70
Identity = 137/390 (35.13%), Postives = 221/390 (56.67%), Query Frame = 1
Query:    1 MEQPEGFRD------PEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDINR----FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGG--GTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKS 1134
            ME PEG R+       E  D V  +   SLYGLKQ+ R W   +   L+   GF  ++ D C+Y R  G+    V +YVDD++IAS     +  +KA + +K+RI D G+    LG++I+ +L ++T+ +SQ    +  + KFG ++  P  TP++P +  +   E +  E+        +RS+VG+L ++A    P+IS AV KL R    P  KH+ A   V +YL  + +  I   G  GT L AY DA++   +R D +SV+G  ++  G +P+VW S  QK+V   +TEAEY+AL +C K+ +W+R LL ++G +Q+  T + E DN   ++ A  +    + +H+ + YH++RE V  NE+E++Y++T  Q+ D  TK L+ K+
Sbjct:   32 MELPEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSM-GFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIVPVKAGIAEKFRIKDLGRARFILGIEIDYDLERRTLSISQKACTESIIEKFGQENAKPCLTPLEPGVQFTEGDEPQTEENKTKMMSKPYRSLVGSLIYLACGMRPDISVAVAKLSRFLENPCEKHWDAGIAVVRYLLKTNDVGIVCDGLLGTQLEAYSDANW-AGNRDDRRSVSGMLLMLCG-APVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYE-DNQGAMALAKNVGYHARTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADFMTKGLSSKT 417          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: A0A2N9FIJ5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FIJ5_FAGSY)

HSP 1 Score: 247 bits (631), Expect = 4.260e-70
Identity = 148/385 (38.44%), Postives = 231/385 (60.00%), Query Frame = 1
Query:    1 MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNKEYRANEDDI----NRFRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKL-GGGTILRAYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELG-FKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKSF 1137
            M QP GF DP  PDHV KL+KS LYGLKQ+PR W+    S L    GF  S  D  +++ + G  V Y+ +YVDDI++  N    VA+L A L + + + D G L  FLGL+I+ N  +  + V Q ++I D L+KF   +C PA TP       S++++ + + DD+     ++RS+VG L + AT++ P+I++AVN++ +  + P + H  AA R+ +YL+G+ +  I+   G + L A+ D+D+   D  D +S TG   VFLG++PI W S+ Q +V+  +TEAEY AL   A ++ WLR +L +LG +    PT     DNT+ I+ A+      + +H+ V+YH+VRE V + ++ + +I+T +Q+ DLFTK L  + F
Sbjct:  668 MIQPPGFVDPTHPDHVCKLQKS-LYGLKQAPRAWFERFTSHLLTI-GFVASTADPSLFVLRTGSTVLYLLLYVDDIILTGNSSSAVASLIAQLAETFELKDLGPLRFFLGLQIDYN--RTGLFVHQRKYISDLLLKFNMTNCKPASTP------FSISQKLQPSTDDVLPDPTQYRSLVGALQY-ATFTRPDITYAVNQVCQYMHKPNSTHLVAAKRILRYLQGTLHLGIRFQSGSSSLTAFTDSDW-AGDPYDRRSTTGI-TVFLGNNPITWVSKKQHTVSRSSTEAEYRALATGAAELAWLRQVLCDLGVYLPTAPTMWC--DNTSAIALASNPVFHSRTKHIEVDYHFVRERVVRGDLHLHFISTEDQLADLFTKPLTTQRF 1037          
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 234 bits (598), Expect = 7.540e-70
Identity = 131/387 (33.85%), Postives = 215/387 (55.56%), Query Frame = 1
Query:    1 MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTRSEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRITDAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMDPTMDLSVNK-EYRANEDDINR---FRSMVGTLSWIATWSIPEISFAVNKLQRATNYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILR--AYCDADFFCTDRIDGKSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRYLLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELVQQNEIEVKYINTSEQVGDLFTKALNEKSFEI 1143
            M QP+G+ D + PDHV KLK+S LYGLKQSPR W   +   + +  GF + E D C+Y+++ G  + +V +YVDD+V+AS++D  +   K  L K++ +TD G+LE FLG++I        + V Q++F+K  L KFG     P KTP DP + L+ N  E     +D  +   +RS+VG L ++   + P+++ AV  L + +  P   H+ A  RV +YL+ +    ++      L    Y DAD+     I+ +  T  Y   +    I W S+ Q++V   +TEAEY+AL E  ++ +WL+  L ELG           EDN   I+ A      ++ +H+ + YH+VRE V+  ++ ++Y++T++ + D+ TKA+    F++
Sbjct:   18 MAQPDGYVDEDHPDHVCKLKRS-LYGLKQSPRMWNQTIDDFMLKL-GFKKCESDHCVYLKRDGQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDSLGMCGYSDADW--AGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQV 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig849.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK1.300e-11450.73Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y1P1_HETAK1.210e-9443.12Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6A3JMT1_9STRA2.450e-7337.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4F359_9STRA2.670e-7335.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3HAR6_9STRA4.450e-7335.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0MK94_9STRA1.370e-7135.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3L5P5_9STRA4.230e-7035.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4DYE5_9STRA4.230e-7035.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9FIJ5_FAGSY4.260e-7038.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB98_PHYRM7.540e-7033.85Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig849contigH-akashiwo_Contig849:162423..163568 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog164328.Phyra85518
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size1146
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.48e-67
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QH4V@4776|Peronosporales
DescriptionGAG-pre-integrase domain
Cds size1146
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388010.9368823-CDS-H-akashiwo_Contig849:162422..1635681681388010.9368823-CDS-H-akashiwo_Contig849:162422..163568Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig849 162423..163568 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig849.6.1prot_H-akashiwo_Contig849.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig849 162423..163568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig849.6.1

>prot_H-akashiwo_Contig849.6.1 ID=prot_H-akashiwo_Contig849.6.1|Name=mRNA_H-akashiwo_Contig849.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=382bp
MEQPEGFRDPEFPDHVWKLKKSSLYGLKQSPRCWYANLHSTLREYDGFTR
SEYDGCIYMRKVGDAVTYVTIYVDDIVIASNDDRTVAALKATLKKKYRIT
DAGKLENFLGLKINRNLGKKTIHVSQSQFIKDALIKFGYDHCPPAKTPMD
PTMDLSVNKEYRANEDDINRFRSMVGTLSWIATWSIPEISFAVNKLQRAT
NYPEAKHFAAAGRVFKYLKGSGNKSIKLGGGTILRAYCDADFFCTDRIDG
KSVTGYYIVFLGDSPIVWTSRLQKSVTTCTTEAEYLALGECAKDVMWLRY
LLAELGFKQIKPTTVNEEDNTACISWATEITVTRKNRHLHVNYHYVRELV
QQNEIEVKYINTSEQVGDLFTKALNEKSFEIF
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mRNA from alignment at H-akashiwo_Contig849:162423..163568+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig849.6.1 ID=mRNA_H-akashiwo_Contig849.6.1|Name=mRNA_H-akashiwo_Contig849.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1146bp|location=Sequence derived from alignment at H-akashiwo_Contig849:162423..163568+ (Heterosigma akashiwo CCMP452)
ATGGAGCAGCCCGAAGGCTTTCGTGATCCTGAGTTTCCTGATCATGTGTG GAAACTAAAAAAGTCATCACTGTACGGCTTGAAGCAAAGCCCGCGTTGCT GGTACGCTAACCTGCATTCAACCTTGAGGGAGTACGACGGTTTCACACGC AGTGAATACGACGGATGTATTTATATGAGAAAGGTTGGTGATGCCGTGAC CTACGTCACCATTTACGTGGATGATATTGTCATCGCGTCCAACGATGACA GGACGGTGGCTGCACTCAAAGCGACGCTTAAAAAGAAGTACAGAATTACT GATGCGGGTAAACTGGAGAACtTTTTAGGCCTAAAGATCAACAGGAACTT AGGCAAAAAGACAATTCACGTGTCCCAGTCACAATTCATCAAAGATGCGC TGATCAAGTTTGGGTATGATCATTGTCCTCCTGCGAAGACTCCAATGGAT CCTACAATGGATCTTAGTGTCAACAAGGAATACAGAGCTAATGAGGATGA TATCAACAGGTTTCGTTCCATGGTGGGGACTCTGAGCTGGATCGCAACCT GGTCTATACCAGAGATCTCCTTCGCAGTAAACAAGCTACAGCGGGCGACT AACTATCCAGAAGCCAAACACTTTGCTGCTGCAGGCAGGGTCTTCAAGTA CCTGAAAGGTTCTGGTAATAAGTCCATCAAACTTGGTGGAGGCACGATTC TTCGCGCTTATTGCGATGCGGACTTCTTCTGCACCGATAGGATTGATGGA AAATCGGTCACCGGTTATTATATTGTCTTCCTAGGGGACTCTCCTATAGT TTGGACATCTAGGCTACAGAAATCAGTGACTACGTGTACCACTGAGGCCG AATATCTAGCTCTTGGAGAATGTGCAAAAGATGTAATGTGGCTACGATAC TTATTGGCAGAACTAGGCTTCAAACAAATCAAACCTACGACAGTGAATGA GGAGGACAACACAGCTTGCATCTCTTGGGCCACTGAGATCACTGTTACTA GGAAGAATCGCCATCTTCATGTGAACTATCACTATGTGAGGGAGCTAGTT CAACAAAATGAAATCGAAGTGAAGTACATCAATACTTCAGAACAAGTTGG AGATCTATTTACCAAGGCTCTCAATGAGAAATCATTTGAGATTTTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig849:162423..163568+

>mRNA_H-akashiwo_Contig849.6.1 ID=mRNA_H-akashiwo_Contig849.6.1|Name=mRNA_H-akashiwo_Contig849.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1146bp|location=Sequence derived from alignment at H-akashiwo_Contig849:162423..163568+ (Heterosigma akashiwo CCMP452)
ATGGAGCAGCCCGAAGGCTTTCGTGATCCTGAGTTTCCTGATCATGTGTG
GAAACTAAAAAAGTCATCACTGTACGGCTTGAAGCAAAGCCCGCGTTGCT
GGTACGCTAACCTGCATTCAACCTTGAGGGAGTACGACGGTTTCACACGC
AGTGAATACGACGGATGTATTTATATGAGAAAGGTTGGTGATGCCGTGAC
CTACGTCACCATTTACGTGGATGATATTGTCATCGCGTCCAACGATGACA
GGACGGTGGCTGCACTCAAAGCGACGCTTAAAAAGAAGTACAGAATTACT
GATGCGGGTAAACTGGAGAACtTTTTAGGCCTAAAGATCAACAGGAACTT
AGGCAAAAAGACAATTCACGTGTCCCAGTCACAATTCATCAAAGATGCGC
TGATCAAGTTTGGGTATGATCATTGTCCTCCTGCGAAGACTCCAATGGAT
CCTACAATGGATCTTAGTGTCAACAAGGAATACAGAGCTAATGAGGATGA
TATCAACAGGTTTCGTTCCATGGTGGGGACTCTGAGCTGGATCGCAACCT
GGTCTATACCAGAGATCTCCTTCGCAGTAAACAAGCTACAGCGGGCGACT
AACTATCCAGAAGCCAAACACTTTGCTGCTGCAGGCAGGGTCTTCAAGTA
CCTGAAAGGTTCTGGTAATAAGTCCATCAAACTTGGTGGAGGCACGATTC
TTCGCGCTTATTGCGATGCGGACTTCTTCTGCACCGATAGGATTGATGGA
AAATCGGTCACCGGTTATTATATTGTCTTCCTAGGGGACTCTCCTATAGT
TTGGACATCTAGGCTACAGAAATCAGTGACTACGTGTACCACTGAGGCCG
AATATCTAGCTCTTGGAGAATGTGCAAAAGATGTAATGTGGCTACGATAC
TTATTGGCAGAACTAGGCTTCAAACAAATCAAACCTACGACAGTGAATGA
GGAGGACAACACAGCTTGCATCTCTTGGGCCACTGAGATCACTGTTACTA
GGAAGAATCGCCATCTTCATGTGAACTATCACTATGTGAGGGAGCTAGTT
CAACAAAATGAAATCGAAGTGAAGTACATCAATACTTCAGAACAAGTTGG
AGATCTATTTACCAAGGCTCTCAATGAGAAATCATTTGAGATTTTT
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