mRNA_H-akashiwo_Contig849.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S3XM67_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM67_HETAK) HSP 1 Score: 451 bits (1161), Expect = 5.120e-158 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 3 Query: 3 MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEMEGKDIDRRSPSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPDDGAVGTSPGSAQGKAPTWDWDQGEKADPGSGVGVQAGQASPQPAVKLETGPAAMGGLGFGSDS 686 MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEMEGKDIDRRSPSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPDDGAVGTSPGSAQGKAPTWDWDQGEKADPGSGVGVQAGQASPQPAVKLETGPAAMGGLGFGSDS Sbjct: 1 MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEMEGKDIDRRSPSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPDDGAVGTSPGSAQGKAPTWDWDQGEKADPGSGVGVQAGQASPQPAVKLETGPAAMGGLGFGSDS 228
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A6V1NR77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR77_HETAK) HSP 1 Score: 451 bits (1161), Expect = 7.910e-157 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 3 Query: 3 MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEMEGKDIDRRSPSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPDDGAVGTSPGSAQGKAPTWDWDQGEKADPGSGVGVQAGQASPQPAVKLETGPAAMGGLGFGSDS 686 MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEMEGKDIDRRSPSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPDDGAVGTSPGSAQGKAPTWDWDQGEKADPGSGVGVQAGQASPQPAVKLETGPAAMGGLGFGSDS Sbjct: 1 MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEMEGKDIDRRSPSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPDDGAVGTSPGSAQGKAPTWDWDQGEKADPGSGVGVQAGQASPQPAVKLETGPAAMGGLGFGSDS 228
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S2V728_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V728_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.330e-19 Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 210 ASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQ------VSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRV 437 +S ++ RG+YRCSRCG PKKGH+CPYQ R+++RDQ + V T + ACQVELD + RMLDL QG +YCG+ + Sbjct: 73 SSRAARRNRGNYRCSRCGAPKKGHICPYQARYRRRDQQENGQSVMVPTSNGACQVELDPYMTVRMLDLRLQGAPASYCGMAI 154
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S2KP23_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KP23_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.660e-13 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 192 NTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKR-DQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTY 422 N K++ K+K RG+YRC RCGVPKKGH+CPYQ + K+R D+ + AA QVE+DE +V R L+L QG TY Sbjct: 264 NVKSSGNVSSKEKGRGNYRCGRCGVPKKGHICPYQPKLKRRPDEPPPEMRTAAVQVEMDEYMVMRRLNLEIQGFPETY 341
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S3NM57_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NM57_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.160e-12 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 210 ASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRD-QTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPL 458 + +K++ R +YRCS+CG PK+GH+CPYQ R + D + T+ CQ+E+D LV R LDL AQGL +Y G + + T P+ Sbjct: 31 SQAQKRRNRTNYRCSKCGQPKRGHICPYQPRILRADGEKPPETRTVGCQIEIDSRLVVRHLDLQAQGLPESY-GEQQSETVSPI 113
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S4A0P4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0P4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.170e-12 Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 183 PSPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKRDQTQ--VSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCGLRVNTTHGPLPDTISATGGPVPD 497 P+ +TK A E+++ R +YRCS+CG PK+GHVCPYQ R K D T V T++AA QVE+DE L R L L AQG +Y + G P+ G PD Sbjct: 10 PTDDTKKKPA--ERRRNRTNYRCSKCGQPKRGHVCPYQPRVVK-DPTAPAVPTRNAAVQVEMDERLAVRHLSLAAQGYPESYGEIPPXXXXGAPPNYSPGGSGASPD 113
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S1VGY4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGY4_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.950e-12 Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 186 SPNTKAAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKR-DQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTY 422 S +K + +K K RG YRC RCGVPKKGHVCPYQ + K+R D+ ++AA QVE+DE + R L+L QG +Y Sbjct: 293 SQKSKGSGKESDKDKGRGSYRCGRCGVPKKGHVCPYQPKLKRRPDEPPPVMRNAALQVEMDEFMTVRRLNLEIQGFPESY 372
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A7S3PWC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWC9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.790e-12 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 228 KKRGDYRCSRCGVPKKGHVCPYQIRFKKR-DQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTYCG 428 K RG YRC +CGVPKKGH+CPYQ + K+R D+ ++AA QVE+DE LV R L+L QG +Y G Sbjct: 206 KGRGSYRCGKCGVPKKGHICPYQPKLKRRADEPPPEMRNAATQVEMDEFLVVRRLNLEIQGFPESYTG 273
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A6U6CJ73_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6CJ73_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.850e-12 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 222 KQKKRGDYRCSRCGVPKKGHVCPYQIRFKKR-DQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTY 422 K K RG YRC +CGVPKKGHVCPYQ + K+R D+ + A+ QVE+DE LV R L+L QGL +Y Sbjct: 350 KDKGRGSYRCGKCGVPKKGHVCPYQPKLKRRPDEPPPEMKSASTQVEMDEFLVLRRLNLEIQGLPESY 417
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Match: A0A1Z5KDJ8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDJ8_FISSO) HSP 1 Score: 75.9 bits (185), Expect = 8.210e-12 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 201 AAAASLEKQKKRGDYRCSRCGVPKKGHVCPYQIRFKKR-DQTQVSTQDAACQVELDEGLVCRMLDLGAQGLAVTY 422 ++A K K RG Y+C RCGVPKKGHVCPYQ + K+R D+ T++AA QVE DE + R L++ QG +Y Sbjct: 229 SSAGESGKDKGRGSYKCGRCGVPKKGHVCPYQAKVKRRPDEPPPETRNAAVQVERDEFMTLRRLNIRIQGFPESY 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig849.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig849.5.1 >prot_H-akashiwo_Contig849.5.1 ID=prot_H-akashiwo_Contig849.5.1|Name=mRNA_H-akashiwo_Contig849.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=262bp MDSSHESQGGGQKRKINRGLRINEDAVGGETSPDRVQEPQENPNKTEDPEback to top mRNA from alignment at H-akashiwo_Contig849:155972..156904+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig849.5.1 ID=mRNA_H-akashiwo_Contig849.5.1|Name=mRNA_H-akashiwo_Contig849.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=933bp|location=Sequence derived from alignment at H-akashiwo_Contig849:155972..156904+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig849:155972..156904+ >mRNA_H-akashiwo_Contig849.5.1 ID=mRNA_H-akashiwo_Contig849.5.1|Name=mRNA_H-akashiwo_Contig849.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=786bp|location=Sequence derived from alignment at H-akashiwo_Contig849:155972..156904+ (Heterosigma akashiwo CCMP452)back to top |