mRNA_H-akashiwo_Contig848.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig848.3.1 vs. uniprot
Match: A0A7S3XR38_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR38_HETAK) HSP 1 Score: 562 bits (1448), Expect = 2.000e-199 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = -2 Query: 64 IYLFFTLMGCLVGFIQVSALLLIRLLFKETAGPWLQSSALTFQLGCVTFPILKDTLSFHLMYHILAVLMALISLYIFSTKKAIIPKLQSPSLRTPGGDAEVQEGSSMGGEGEKSFGRGDVISAFCLFFLGGLIVETTTYLESYIEDVGASVDSDDALVALTSTSLLAQMITLYLQQDASTGSMVTYFISCAAAGLVCQLPPLIWSASSTTALWVTIFGTGLFFGPCWGLVFDVWDRFTAEPTAWGSALLNLGLQGGCGFYASGAYWVWSQRGWPRVLLCSNALAFAAA 927 IYLFFTLMGCLVGFIQVSALLLIRLLFKETAGPWLQSSALTFQLGCVTFPILKDTLSFHLMYHILAVLMALISLYIFSTKKAIIPKLQSPSLRTPGGDAEVQEGSSMGGEGEKSFGRGDVISAFCLFFLGGLIVETTTYLESYIEDVGASVDSDDALVALTSTSLLAQMITLYLQQDASTGSMVTYFISCAAAGLVCQLPPLIWSASSTTALWVTIFGTGLFFGPCWGLVFDVWDRFTAEPTAWGSALLNLGLQGGCGFYASGAYWVWSQRGWPRVLLCSNALAFAAA Sbjct: 73 IYLFFTLMGCLVGFIQVSALLLIRLLFKETAGPWLQSSALTFQLGCVTFPILKDTLSFHLMYHILAVLMALISLYIFSTKKAIIPKLQSPSLRTPGGDAEVQEGSSMGGEGEKSFGRGDVISAFCLFFLGGLIVETTTYLESYIEDVGASVDSDDALVALTSTSLLAQMITLYLQQDASTGSMVTYFISCAAAGLVCQLPPLIWSASSTTALWVTIFGTGLFFGPCWGLVFDVWDRFTAEPTAWGSALLNLGLQGGCGFYASGAYWVWSQRGWPRVLLCSNALAFAAA 360
BLAST of mRNA_H-akashiwo_Contig848.3.1 vs. uniprot
Match: A0A7S3XVX1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVX1_HETAK) HSP 1 Score: 313 bits (802), Expect = 5.570e-101 Identity = 161/306 (52.61%), Postives = 217/306 (70.92%), Query Frame = -2 Query: 16 IYLFFTLMGCLVGFIQVSALLLIRLLFKETAGPWLQSSALTFQLGCVTFPILKDTLSFHLMYHILAVLMALISLYIFSTKKAIIPKLQSPSLRTPGGDAEV--QEGSSMGGEGEKSFGRGDVISAFCLFFLGGLIVETTTYLESYIEDVGASVDSDDALVALTSTSLLAQMITLYLQQDASTGSMVTYFISCAAAGLVCQLPPLIWSASSTTALWVTIFGTGLFFGPCWGLVFDVWDRFTAEPTAWGSALLNLGLQGGCGFYASGAYWVWSQRGWPRVLLCSNALAFAAAAACTLALLTVPPGSRK 927 I+LFFTLMG +VG +Q ALLLIR+LF TAGPWLQ+++ FQ G V F IL + FH MY+ L V ALI LYI ST K ++P+LQ L+T G D +E S G+ +K+F GDV+S+ +FFLGGLIVE TTYL+ +++DV V++++AL+ LTS SLLAQ+ ++LQ+ AS+ +++ YF+ G+ CQLPP +W A+S ALW T+ GTG FFGPC GLVFD+WDR+T PTAWGSALLNLGLQGGCGFY++GA+ +W+ P VLL +NA+A A+AA ++L + R+ Sbjct: 122 IFLFFTLMGAIVGLLQCGALLLIRMLFSSTAGPWLQAASFAFQFGVVAFSILMKLIPFHYMYNYLTVATALIGLYILSTLKILVPRLQDQFLQT-GNDKSTAGEEESGSAGQAQKAFATGDVLSSLAVFFLGGLIVENTTYLQPFLQDVNPGVNANNALILLTSASLLAQIFMVFLQRGASSAAVMGYFLGACLCGVACQLPPFVWGAASDAALWATVVGTGFFFGPCVGLVFDLWDRYTPVPTAWGSALLNLGLQGGCGFYSNGAFGIWTLINDPLVLLYANAVAMASAAMFGSSMLCISTAERR 426
BLAST of mRNA_H-akashiwo_Contig848.3.1 vs. uniprot
Match: A0A7S3UNI0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNI0_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 1.120e-15 Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = -2 Query: 76 QLPPLIW------SASSTTALWVTIFGTGLFFGPCWGLVFDVWDRFTAEPTAWGSALLNLGLQGGCGFYASGAYWVWSQRGWPRVLLCSNALA 336 QL P+++ SA + LW+ G+GL +GP GL+FD+WDR T EPTAWG+A LN G+ G GFY++G + VW+ P VL +N LA Sbjct: 12 QLVPVLFASAEGPSALRRSVLWLFALGSGLGWGPLPGLLFDLWDRCTPEPTAWGAAALNFGIYAGSGFYSNGMFAVWTSLRDPLVLPWANFLA 104
BLAST of mRNA_H-akashiwo_Contig848.3.1 vs. uniprot
Match: A0A6V1P7C3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7C3_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 7.410e-14 Identity = 59/174 (33.91%), Postives = 87/174 (50.00%), Query Frame = -2 Query: 64 RGDVISAFCLFFLGGLIVETTTYLESYIEDVG--ASVDSDDALVALTSTSLLAQMITLYLQQDASTGSMVTYFISCAAAGLVCQLPPLIWSASSTTALWVTIFGTGLFFGPCWGLVFDVWDRFTAEPTAWGSALLNLGLQGGCGFYASGAYWVWSQRGWPRVLLCSNALAFAAA 579 R D F LF++ G IV TT+YL+SYI DVG +V+ D L + Q++ L LQ + G++ + L + SS LW++I G GP +G VFD+W+R T E T GSA++ G+ G G ++ + +W G VL+ N L+FA A Sbjct: 12 RVDYCIGFMLFWIAGCIVSTTSYLKSYIPDVGLGGAVEPDALLAVFMVLCIAGQLVALALQAGMGLRQLRAQMSLLFGFGMLSMVVVLAFP-SSKMVLWISILIYGFCVGPLYGYVFDLWNRST-EVTEMGSAVVIFGVAGS-GVFSYLTHTIWLAVGSCSVLMVVNGLSFAVA 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig848.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig848.3.1 >prot_H-akashiwo_Contig848.3.1 ID=prot_H-akashiwo_Contig848.3.1|Name=mRNA_H-akashiwo_Contig848.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=218bp RCRHRLPAPWGHSQQGQGAGRGGGKGQRVGAEQHPRPAPLGPDPVGPARVback to top mRNA from alignment at H-akashiwo_Contig848:306251..307178+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig848.3.1 ID=mRNA_H-akashiwo_Contig848.3.1|Name=mRNA_H-akashiwo_Contig848.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=928bp|location=Sequence derived from alignment at H-akashiwo_Contig848:306251..307178+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig848:306251..307178+ >mRNA_H-akashiwo_Contig848.3.1 ID=mRNA_H-akashiwo_Contig848.3.1|Name=mRNA_H-akashiwo_Contig848.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=654bp|location=Sequence derived from alignment at H-akashiwo_Contig848:306251..307178+ (Heterosigma akashiwo CCMP452)back to top |