mRNA_H-akashiwo_Contig847.7.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig847.7.1
Unique NamemRNA_H-akashiwo_Contig847.7.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A6V1TY31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TY31_HETAK)

HSP 1 Score: 173 bits (438), Expect = 1.700e-50
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 
Query:    1 PKGAQIEGEEKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            PKGAQIEGEEKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP
Sbjct:   19 PKGAQIEGEEKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 108
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A059A7H4_EUCGR (Brix domain-containing protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059A7H4_EUCGR)

HSP 1 Score: 103 bits (256), Expect = 2.990e-25
Identity = 50/81 (61.73%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+P+SFVF   K+   ++QL  DLR++M PYTALKLKE+K+N++KD+L+VAG  GVTHFL+LS+TE A  L+VARTPQGP
Sbjct:   31 DKIPKSFVFSRGKLPGPLKQLEMDLRKLMLPYTALKLKEKKRNNLKDFLNVAGPMGVTHFLILSKTETAPYLRVARTPQGP 111
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A5C7I283_9ROSI (Brix domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I283_9ROSI)

HSP 1 Score: 105 bits (261), Expect = 3.230e-25
Identity = 51/81 (62.96%), Postives = 68/81 (83.95%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+P+SFVF   K+   ++QL  DLR++M PYTALKLKE+K+N++KD+L+VAG  GVTHFL+LS+TEAA  L+VARTPQGP
Sbjct:   33 DKIPKSFVFSRGKLPPPLKQLEMDLRKLMLPYTALKLKEKKRNNLKDFLNVAGPMGVTHFLILSKTEAAPYLRVARTPQGP 113
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A1Q3D0X6_CEPFO (Brix domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D0X6_CEPFO)

HSP 1 Score: 101 bits (251), Expect = 3.340e-25
Identity = 49/81 (60.49%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +KVP+SFVF   K+   ++QL  DLR++M P+TAL LKE+K+N++KD+L+VAG  GVTHFL+LS+T+AA  L+VARTPQGP
Sbjct:   31 DKVPKSFVFSRGKLPSSLKQLQVDLRKLMLPFTALNLKEKKRNNLKDFLNVAGPMGVTHFLMLSKTDAAPYLRVARTPQGP 111
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A7J7CFX8_TRIWF (Peter Pan-like protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CFX8_TRIWF)

HSP 1 Score: 104 bits (259), Expect = 6.710e-25
Identity = 51/81 (62.96%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+P+SFVF   K+   ++QL  DLR++M PYTALKLKE+K+N+VKD+L VAG  GVTHFL+LS+TE+A  L+VARTPQGP
Sbjct:   29 DKIPKSFVFSRGKLPGPLKQLEMDLRKLMLPYTALKLKEKKRNNVKDFLKVAGPMGVTHFLILSKTESAPYLRVARTPQGP 109
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A7J7G9A7_CAMSI (Brix domain-containing protein n=7 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7G9A7_CAMSI)

HSP 1 Score: 103 bits (258), Expect = 8.220e-25
Identity = 50/81 (61.73%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+PRSFVF   K+   ++QL ADLR++M PYTALKLKE+K+N++KD+L++AG  GVTHFL+LS+T  A  L+VARTPQGP
Sbjct:   30 DKIPRSFVFSRGKLPGSLRQLQADLRKLMLPYTALKLKEKKRNNIKDFLNIAGPMGVTHFLMLSKTATAPYLRVARTPQGP 110
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A4Y7IV41_PAPSO (Brix domain-containing protein n=5 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IV41_PAPSO)

HSP 1 Score: 103 bits (258), Expect = 8.730e-25
Identity = 49/81 (60.49%), Postives = 69/81 (85.19%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+P+SFVF   K+S  ++QL+ DLR+ M PYTALKLKE+K+N++KD+L+VAG+ GVTHFL+LS+T ++  L+VARTPQGP
Sbjct:   30 DKIPKSFVFSRGKLSGSLKQLLKDLRESMLPYTALKLKEKKRNNLKDFLNVAGSLGVTHFLMLSKTSSSPYLRVARTPQGP 110
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BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A834YVT2_9MAGN (Brix domain-containing protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YVT2_9MAGN)

HSP 1 Score: 100 bits (249), Expect = 1.050e-24
Identity = 49/81 (60.49%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+P+SFVF   K+   ++QL  DLR+++ P+TALKLKE+K+NS+KD+L+VAG  GVTHFL+LS+TE A  L+VARTPQGP
Sbjct:   28 DKIPKSFVFSRGKLPGSLKQLQLDLRKLILPHTALKLKEKKRNSLKDFLNVAGPMGVTHFLMLSKTETAPYLRVARTPQGP 108
[Close]
BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A059A8Q7_EUCGR (Brix domain-containing protein n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059A8Q7_EUCGR)

HSP 1 Score: 103 bits (256), Expect = 1.860e-24
Identity = 50/81 (61.73%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            +K+P+SFVF   K+   ++QL  DLR++M PYTALKLKE+K+N++KD+L+VAG  GVTHFL+LS+TE A  L+VARTPQGP
Sbjct:   31 DKIPKSFVFSRGKLPGPLKQLEMDLRKLMLPYTALKLKEKKRNNLKDFLNVAGPMGVTHFLILSKTETAPYLRVARTPQGP 111
[Close]
BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Match: A0A0A0KWJ9_CUCSA (Brix domain-containing protein n=14 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KWJ9_CUCSA)

HSP 1 Score: 103 bits (256), Expect = 1.940e-24
Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 1 
Query:   28 EKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERKKNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP 270
            EK+P+SFVF   K+   ++QL  DLR++M PYTAL LKE+K+N++KDYL+VAG  GVTHFL+LS+TE A  L+VARTPQGP
Sbjct:   30 EKIPKSFVFSRGKLPGPLKQLQMDLRKLMLPYTALNLKEKKRNNLKDYLNVAGPMGVTHFLMLSKTETAPYLRVARTPQGP 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig847.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1TY31_HETAK1.700e-50100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A059A7H4_EUCGR2.990e-2561.73Brix domain-containing protein n=1 Tax=Eucalyptus ... [more]
A0A5C7I283_9ROSI3.230e-2562.96Brix domain-containing protein n=1 Tax=Acer yangbi... [more]
A0A1Q3D0X6_CEPFO3.340e-2560.49Brix domain-containing protein n=1 Tax=Cephalotus ... [more]
A0A7J7CFX8_TRIWF6.710e-2562.96Peter Pan-like protein n=1 Tax=Tripterygium wilfor... [more]
A0A7J7G9A7_CAMSI8.220e-2561.73Brix domain-containing protein n=7 Tax=Camellia si... [more]
A0A4Y7IV41_PAPSO8.730e-2560.49Brix domain-containing protein n=5 Tax=Papaver som... [more]
A0A834YVT2_9MAGN1.050e-2460.49Brix domain-containing protein n=1 Tax=Tetracentro... [more]
A0A059A8Q7_EUCGR1.860e-2461.73Brix domain-containing protein n=4 Tax=Myrtoideae ... [more]
A0A0A0KWJ9_CUCSA1.940e-2462.96Brix domain-containing protein n=14 Tax=Cucurbitac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig847contigH-akashiwo_Contig847:434423..437195 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog3656.XP_008454337.1
PFAMsBrix
Model size270
Max annot lvl35493|Streptophyta
KEGG koko:K14859
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1990904
Exons3
Evalue3.65e-25
EggNOG OGsKOG2963@1|root,KOG2963@2759|Eukaryota,37R2S@33090|Viridiplantae,3GDS2@35493|Streptophyta,4JNP3@91835|fabids
DescriptionPeter Pan-like protein
Cds size270
COG categoryJ
BRITEko00000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388010.4076068-CDS-H-akashiwo_Contig847:434422..4344881681388010.4076068-CDS-H-akashiwo_Contig847:434422..434488Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig847 434423..434488 +
1681388010.4210753-CDS-H-akashiwo_Contig847:434662..4347451681388010.4210753-CDS-H-akashiwo_Contig847:434662..434745Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig847 434663..434745 +
1681388010.4318976-CDS-H-akashiwo_Contig847:437074..4371951681388010.4318976-CDS-H-akashiwo_Contig847:437074..437195Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig847 437075..437195 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig847.7.1prot_H-akashiwo_Contig847.7.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig847 434423..437195 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig847.7.1

>prot_H-akashiwo_Contig847.7.1 ID=prot_H-akashiwo_Contig847.7.1|Name=mRNA_H-akashiwo_Contig847.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=90bp
PKGAQIEGEEKVPRSFVFKNKKVSQYVQQLIADLRQVMAPYTALKLKERK
KNSVKDYLSVAGTFGVTHFLVLSQTEAAVNLKVARTPQGP
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mRNA from alignment at H-akashiwo_Contig847:434423..437195+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig847.7.1 ID=mRNA_H-akashiwo_Contig847.7.1|Name=mRNA_H-akashiwo_Contig847.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2773bp|location=Sequence derived from alignment at H-akashiwo_Contig847:434423..437195+ (Heterosigma akashiwo CCMP452)
CCGAAAGGGGCTCAAATTGAAGGAGAAGAAAAAGTGCCAAGAAGCTTTGT
TTTCAAAAATAAAAAGGTGTTTTACCAAACACCGTTGCTTTTTTAGCATT
CTGTATACGGCCAATTCCATAATCTGTTTCATTATCCACTACTGTGATCA
TGCTCTCTTACGTTCACTCCCATCATGTATTTTCTAGAGCAGTCTCACTC
AGGTTTTAAACCTGCCAATTGTTTTCATGCCCTTCTATAGGTTAGCCAGT
ATGTCCAGCAACTCATCGCCGACCTTCGCCAAGTAATGGCTCCTTACACA
GCACTCAAACTGAAAGAAAGGAAGTGAGTTTCCTTTACATCGATCTTGAC
TCAAACATCCCCCACCCCCCTCCCAATATGATGTGTAGCAGCACGGAATA
CTGGGAGTAAAAGAGCATATATTTCATGCACAGAATAAAAACAAATAAAA
AATTAAACTTTTTTCTTTTCAAAGAATAATGTCCATCATTCATAACTTTT
ATTTCGCATTGAAACGCCCTTGCAGAAGTTCTGTCTCTTTCCTTATCCAG
GGAGCGAGGGTTACTCATGGCCAAAGATTTTCACCCATTATTTTTTCAAG
TGAAGCTTTAAGACCTTGCAGAGAATAGGCTTTGCCAAACATATACTAAA
TGTACACCTTTGAGGCGTTATCAATCAGCCTCTAGTTCTGGTCTGACTAA
ACAATGTAGTAGGATAACGAGAGCAGGGTCAGTATTGGAGTTTCTGATAG
GACAGTGATCAAGGCTGGCTGGCTCAAATTCTGCAATGACACTTGGTTGA
TCTGGGAACACTCCCAGGAGCTCTTTGACGAGTTCGTGGAGAACTTCAAT
GATAGCATGTACATCCACAGATCCAGTGGGAGCCAGTGTTGCTGTTATTG
TTCTAGGAGAAGGGGCAGTTAGTAGTTTGCGTTTTTGGATGTGTTGTGTT
GTTTGGATGTGTTGGTGGTGAGAAACGAGGATGACTCTTTTATTACCATG
GTGTACAGGAAGCCTGAGCACTCTGACAGGTATCGCCATTGGACATCCAA
CCACCATCCCGTTGTAAGGAGGATAAGCTCCTCTCTGGTATCATCAGAAC
AACTTTGGTGTACCGTAGTACCCACCACTGCTCTACGGCGAGCCTGAAGA
AGATATTGGCGGAGTTGGCCCATTTGAGGGGGGAAATTGCTGACAACGGA
CGGTTATCTAGATGAGTTTATGGAGATTGCTTTATCGAAGGAGGGTCCCA
AGACAGCTGATGATGAGGAGGAGGAGGCTGCTGCCTCTGGGGATCACACC
GTGGGTGACAGTGAGGAGGTTGAGGAGCTGCTGGGTACTTTGGTGGTGGT
CCCCCCTTTCACCGAGAAGGAGTTGCAGCCGGCTCTCAGGGCGCTATGTG
CGAGGCTGAGTTTGAAGCTTCTCTACAAAAGAAAAAAAAAAGTCAACTTG
TTGGGCTGTTGGTTGGTTTCTAGAAGAGTACCGGCCACGGACAGGATGCA
GCAGAAGAACATGGTCTATAAAAATTTCTTGTGAGTGTGAGGTTAGTTAT
GTTGGTCAGACCAAAAGATCGCTGCTAGCCACAAGGGTGATGGAGGAGCA
TAGATGGCGAGTCGGTGGATGCAGCCAGGAATTCATCATTATTGTTTGTT
GACAGAAGGGGAAAGAAGAATGACACTGGGTTGCCTGTCCATTGCTTGGA
CTCTGATTTTTCTATAATCCGTTTGACTTTGATAATACTGAGGTGCTGTG
CAGACAGGCCCACTGGGGTAAGAGGTTGAAGAAGGAGGCCATGTGTATTG
AAATGGTGGTGGACAACAACCAACTACTCTTCTTGCGATATTCTCCAGAA
GGGCAGAGATTTGCAGCCTCCTCTGCTTGATGGCTGCTTATACACCCGTT
CGTGTTCGCAGCAGTGTGGATGATGTGAAAATATTTTTATATATGTTAAG
AAGTACAGAAAGGCCTATCAATGATGGTCAATCAAATATAGTGTGGATGA
TGTTGTAATAGGGAGGACAAGAGAAAAAAAATATAGCTACAAGAAGGAAA
AATCCAACTTAAATTTCTCGTCTAAAAGGGTCAAACTCAACTTTATTATT
ATATGTAGCTAGGCCAAAAAAATGACATGTACTTCTTATTCGTACTGCTA
TAGTTTGCAAGCCTTTCCCATATAATTCTTCACACTGAAAGAAAAAAAAC
AGGAGAGAGATTTGCTCTGTGTATACATATCGATAGTGTTCTTTCCCACC
TTGTCTGTATATATTTATCACACAAAGTTATAAATCATTCTATCTATAGA
TGTACCAATGCAAAAAATACATCACCCTATGTACCCTACCAATAATTGGG
ACCCCTGGAGCTGGCTCCAGCACAAAAACCGATTCAGTTTGTAATCAAAA
AGGTGAAGTGAATTAGTCACCGAACTATAACATACACAGAGACAGACTGG
CCCGGGATCTGTGCTGTTTGGTGATTGGTATGTATTTTGTTTCGCAAAGT
TGCAAGGTGTTTCCTTGGCTCGAAGCCTGGTGGTGGCCACGAAGCAGCAC
ACAGACGGCAGGCACCGGCCTTTCCCTTCTTCTCGCAAACGACCCCCCCT
CACCTGCCTCACGAGGGCGTGCTCCGCCCCCCCCCTCCCCTTCCCCTCCC
AGGAAGAACTCCGTGAAGGACTACCTGAGCGTGGCGGGGACCTTCGGCGT
GACCCACTTCCTGGTGCTCAGCCAGACCGAGGCGGCCGTCAACCTCAAGG
TCGCGCGCACCCCGCAGGGCCCC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig847:434423..437195+

>mRNA_H-akashiwo_Contig847.7.1 ID=mRNA_H-akashiwo_Contig847.7.1|Name=mRNA_H-akashiwo_Contig847.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=270bp|location=Sequence derived from alignment at H-akashiwo_Contig847:434423..437195+ (Heterosigma akashiwo CCMP452)
CCGAAAGGGGCTCAAATTGAAGGAGAAGAAAAAGTGCCAAGAAGCTTTGT
TTTCAAAAATAAAAAGGTTAGCCAGTATGTCCAGCAACTCATCGCCGACC
TTCGCCAAGTAATGGCTCCTTACACAGCACTCAAACTGAAAGAAAGGAAG
AAGAACTCCGTGAAGGACTACCTGAGCGTGGCGGGGACCTTCGGCGTGAC
CCACTTCCTGGTGCTCAGCCAGACCGAGGCGGCCGTCAACCTCAAGGTCG
CGCGCACCCCGCAGGGCCCC
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