|
|
Homology
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: A0A7S3XVY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVY0_HETAK) HSP 1 Score: 318 bits (815), Expect = 8.310e-103 Identity = 240/344 (69.77%), Postives = 254/344 (73.84%), Query Frame = 1
Query: 157 MMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYSWEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYK-----CACLRTSYTSYSFSFVCLCHPLLLANPSSIPL-GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
MMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWS FVRGLTVAPSGRTFYS + ++ + P GK + P + ++ + +RTEPVHSYK C R + C N S+ L R +VILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPE+
Sbjct: 1 MMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSVNAHRGFVRGLTVAPSGRTFYSCGDDAVVKQWSVEVAHNLQEQPEPLRTYVGKSVFHSIDHHWRDPKFVTTGSSAVDIWDCERTEPVHSYKWGVETVGCARYNPAEADLFASC-------GNDRSVALYDARAATPLRKVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEI 337
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI) HSP 1 Score: 276 bits (707), Expect = 6.880e-86 Identity = 167/402 (41.54%), Postives = 220/402 (54.73%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYS---------WEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSSIPL---GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+K+KTISRVEE YTR+C+ D +++ RNRDP LHPFEKAREYTRAL +VK++KM AKP +GALDGH DGV+C+A+++ +LVQF SG+CDGEIR WDL+++ VW A FVRGL+V P G +F S WE+ + S+ + P GK + A + R EP SY+ + ++ + CL L + SS + R +V+LQMR+N VAWNP EP FV ANED NLYTFD+RN+ +A++IHKDHVSAVMDV+FSPTG+EF SGSY KA A++ + K+ RE RK YR+SLKKR+ H+PEV
Sbjct: 1 MKVKTISRVEESYTRDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSE---------TPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCL----LASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEV 389
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: A0A1V9YWW6_9STRA (Glycoside hydrolase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWW6_9STRA) HSP 1 Score: 270 bits (690), Expect = 4.100e-82 Identity = 218/406 (53.69%), Postives = 265/406 (65.27%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYS---------WEMML-LSNSGQLK*HTTSKSNPSLFG--RMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSS---IPL-GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+K+KTISRVE ++T+E D K+ RN DP LHPFE+ REYTRAL VK++K+ AKPFIGALDGH D V C AN+ SLV F SG+CDGEIR WDL ++K VWS FVRGLT+AP G TF+S W+M + + + Q + T G W + + ++ + RT+P+H + S TS F+ P LLA+ S I L R +VIL+MR+N +AWNPMEPF+F ANEDHNLYTFDMRN++RA++IHKDHVSAVMDVA+SPTGREFVSGSY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V K+ RE +K+ Y+ESLKKR+ HL E+
Sbjct: 17 MKVKTISRVESQFTQELSTDKTKIHRNYDPALHPFERPREYTRALNAVKLDKVFAKPFIGALDGHCDSVSCFANSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTMAPDGNTFFSCSEDKTIKQWKMQIAIDDDDQHEALQTFHGKEPFMGIDHHWSNSTFATCSSVVQVWD-------------HDRTDPIHQFSWGA--DSITSVKFNPA---EPSLLASTGSDRAITLYDTRVATSMRKVILEMRSNALAWNPMEPFHFTVANEDHNLYTFDMRNLDRALMIHKDHVSAVMDVAYSPTGREFVSGSYDRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGKLNPRERKKLEYQESLKKRYQHLTEI 404
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: W7TEM8_9STRA (Ddb1-and cul4-associated factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEM8_9STRA) HSP 1 Score: 266 bits (681), Expect = 1.190e-81 Identity = 201/402 (50.00%), Postives = 257/402 (63.93%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYS--------WEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSS----IPLGYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+KIKT+SR EE +TREC+ DV+K+FRN DP LHPF+KAREYTRAL K++K+ AKPFIGALDGH+DGV+C+A +K +LVQF +G+CDGE+R WDL +K VW A FVRGL+VAP G TF+S W + + +S Q P+ + + A +++ R+ PV S+ C S Y+ + LLA+ S R + +L MR+N +AWNP EP F A+EDHNLYTFD+R +++A +IHKDHV AVMD+AFSPTG+EFV+GSY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KA A++ + R E+K+ Y E+LKKR+ H+PEV
Sbjct: 1 MKIKTLSRCEETFTRECKGDVVKVFRNLDPALHPFDKAREYTRALQATKLDKLFAKPFIGALDGHADGVFCSALSKRNLVQFLTGACDGEVRVWDLNVRKCVWRAYAHAGFVRGLSVAPGGGTFFSCGDKTVKQWTLCVADDSRQ---------EPAALNTWLHSETLTSIDHHWRNAHFATAADTRVLVWDHARSNPVQSFSWGCDAISCVRYNPA-----ERSLLASTGSDRAVTLFDTREGAAMRKAVLVMRSNALAWNPQEPLNFTVASEDHNLYTFDLRKLDQAKLIHKDHVGAVMDLAFSPTGQEFVTGSYDRTVRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWKAEASQQLGVKVPRAEKKLEYEEALKKRYQHMPEV 388
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: A0A067CYZ9_SAPPC (Sof1 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CYZ9_SAPPC) HSP 1 Score: 265 bits (676), Expect = 2.910e-81 Identity = 210/394 (53.30%), Postives = 263/394 (66.75%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYSWEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSS---IPL-GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+K+KTISRVE ++T+E D K+ RN DP LHPFE+ REYTRAL K++K+ AKPFI ALDGH D V C A++ SLV F SG+CDGEIR WDL ++K VWS FVRGLT AP G TF+S +L P GK + + ++ ++ +R++P+H + S TS F+ P LLA+ S I L R +V+L+MR+N +AWNP EP++F ANEDHNLYTFDMRN++RA+++HKDHVSAVMDV++SPTGREFVSGSY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A A+K + K+A RE +++ Y+++LKKRF HL EV
Sbjct: 1 MKVKTISRVESQFTQELATDKTKIHRNYDPSLHPFERPREYTRALNATKLDKIFAKPFIAALDGHCDSVSCFASSPKSLVAFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTTAPDGNTFFSCSEDKTIKQWKLAIAIGDDEQPEALQTFHGKEPFMGIDHHWSNSTFATCSSVVQVWD-HQRSDPLHEFSWGA--DSITSVKFNPA---EPSLLASTGSDRAINLYDTRVATSMRKVVLEMRSNALAWNPREPYHFTVANEDHNLYTFDMRNLDRALMVHKDHVSAVMDVSYSPTGREFVSGSYDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASKHLGKLAPRERKQVEYKDALKKRFQHLTEV 388
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: W4G513_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G513_9STRA) HSP 1 Score: 262 bits (669), Expect = 3.360e-81 Identity = 148/320 (46.25%), Postives = 194/320 (60.62%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYS---------WEMMLLSNSGQLK*HTTSKSNPSLFG--RMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSS---IPL-GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSY 900
+K+KTISRVE+ +T+E D K+ RN DPKLHPFE+ REYTRAL VK++K+ AKPF+GALDGH D V C + SLVQF SG+CDGEIR WDL ++K VWS FVRGLTVAP G +F+S W M + + + T S G W + + ++ + R++P+H+Y S TS F+ P LLA+ S + L R ++++ MR N +AWNPMEP++F ANEDHNLYTFDMRN++RA++IHKDHVSAVMD+A+SPTG+EFVSGSY
Sbjct: 1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFGTSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHAGFVRGLTVAPDGNSFFSCSEDKTIKQWRMAIANEDDAPEAIQTFHGKESFMGIDHHWTNSTFATCSSVVQVWD-------------HNRSDPIHNYSWGA--DSITSVKFNPA---EPSLLASTGSDRAVALYDTRLAQSMRKIVMDMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRALMIHKDHVSAVMDIAYSPTGKEFVSGSY 302
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: K3WUS7_GLOUD (Sof1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUS7_GLOUD) HSP 1 Score: 264 bits (675), Expect = 4.100e-81 Identity = 209/394 (53.05%), Postives = 263/394 (66.75%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYSWEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSS---IPL-GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+K+KTISRVE+ +T+E + D +K+FRN DP LHPFE+ REYTRAL VK+E+M AKPF+GALDGHSDGV A ++ SLV F SG+ DGEIR WDL ++K VWS FVRGL VAP G+TF+S L+ P+ K + + N+ ++++ +R+EP H + A S T+ F+ LLA+ S I L R +++++MR+N +AWNPMEPF F ANEDHNLYTFDMR M+RA+++HKDHVSAVMDV++SPTG+EFVSGSY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K +AK RE RK+ Y+ESLK+R+ HL E+
Sbjct: 1 MKVKTISRVEKDFTQEVQMDKLKVFRNYDPALHPFERPREYTRALNAVKLERMFAKPFVGALDGHSDGVSSIATSRKSLVAFLSGAADGEIRVWDLPRRKCVWSVYGHKGFVRGLAVAPGGQTFFSCSEDKTVKQWALQIKDEDDDVPTALSTFQSKEPFLGIDHHWS-NNMFATCSSKVQVWDHQRSEPTHEF--AWGADSITAVKFNPA---EASLLASTGSDRTITLYDVRVASSMRKIVMEMRSNALAWNPMEPFNFTVANEDHNLYTFDMRRMKRALMVHKDHVSAVMDVSYSPTGKEFVSGSYDRTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSLAKAVPRERRKLEYQESLKERYKHLREI 388
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA) HSP 1 Score: 265 bits (676), Expect = 5.350e-81 Identity = 150/320 (46.88%), Postives = 194/320 (60.62%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYS---------WEMMLLSNSGQLK*HTTSKSNPSLFG--RMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSS---IPL-GYRNKYIYAQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSY 900
+K+KTISRVE+ +T+E D K+ RN DPKLHPFE+ REYTRAL VK++K+ AKPF+GALDGH D V C A + SLVQF SG+CDGEIR WDL ++K VWS FVRGLTVAP G TF+S W M + + + T S G W + + ++ + R++P+H Y S TS F+ LLA+ S + L R +++++MR N +AWNPMEP++F ANEDHNLYTFDMRN++RA++IHKDHVSAVMDVA+SPTG+EFVSGSY
Sbjct: 1 MKVKTISRVEQTFTQELATDRTKIHRNFDPKLHPFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANEDDSPEPVQTFHGKESFMGIDHHWSNTTFATCSSVVQVWD-------------HNRSDPIHHYSWGA--DSITSVKFNPA---EASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSY 302
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: A0A2D4BDS0_PYTIN (Glycoside hydrolase, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDS0_PYTIN) HSP 1 Score: 273 bits (697), Expect = 4.170e-80 Identity = 196/398 (49.25%), Postives = 244/398 (61.31%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSA-----FVRGLTVAPSGRTFYSWEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSSIPLGYRNKYIY--------AQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+K+KTISRVE+ +T E +D +K+FRN DP LHPFE+ REYTRAL VK++++ AKPF+GALDGHSDGV + SLV F SG+CDGEIR WDL +KK VW+A FVRGLTVAPSG FYS L+ + + P K + + +L ++++ R+EP H + S TS F+ LLA+ S RN +Y +V+L MR+N +AWNPMEPF F ANEDHNLYTFDMR + RA+++HKDHVSAVMDVA+SPTGREFVSGSY XXXXXXXXXXXXXXXXXXXXXXXXXXX K+ A K + K+A RE RK+ Y ESLK+R+ HL E+
Sbjct: 22 MKVKTISRVEKDFTAEVESDKLKVFRNYDPALHPFERPREYTRALNAVKLDRLFAKPFVGALDGHSDGVSAITTSPKSLVAFISGACDGEIRIWDLPRKKCVWNAYGHKGFVRGLTVAPSGGVFYSCSEDKTVKQWSLQVNDDEEEMPQALSTFTSKEPFLGIDHHWS-KDLFVTCSSKVQVWDPHRSEPTHEFSWGA--DSITSVKFNPA---EESLLASCGSD----RNITLYDVRMASSMRKVVLDMRSNALAWNPMEPFNFTVANEDHNLYTFDMRKLNRALMVHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFGVNSAKSREVYHAKXXXXXXXXXXXXXXXXXXXXXXXXXXXIWKSEANKKLGKIAPRERRKLEYNESLKERYQHLREI 409
BLAST of mRNA_H-akashiwo_Contig847.6.1 vs. uniprot
Match: A0A8K1CH46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH46_PYTOL) HSP 1 Score: 258 bits (660), Expect = 7.140e-79 Identity = 193/398 (48.49%), Postives = 248/398 (62.31%), Query Frame = 1
Query: 1 VKIKTISRVEEKYTRECRNDVMKMFRNRDPKLHPFEKAREYTRALTTVKIEKMMAKPFIGALDGHSDGVWCTANAKNSLVQFFSGSCDGEIRAWDLAQKKTVWSAF-----VRGLTVAPSGRTFYSWEMMLLSNSGQLK*HTTSKSNPSLFGRMWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSYTSYSFSFVCLCHPLLLANPSSIPLGYRNKYIY--------AQVILQMRTNKVAWNPMEPFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV 1155
+K+KTISRVE+ +T+E +D +K+FRN DP LHPFE+ REYTRAL VK++++ AKPF+GALDGHSD V A + SLV F SG+ DGEIR WDL ++K VW+++ VRGLTVAP+G FYS L+ + + P K + + +L ++++ R++P H + S T+ F+ LLA+ S RN +Y +V+L MR+N +AWNPMEPF F ANEDHNLYTFDMR + RA+++HKDHVSAVMDVA+SPTGREFVSGSY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A + K + K+ RE RK+ Y ESLK+R+ HL E+
Sbjct: 1 MKVKTISRVEKDFTQEVESDKLKVFRNYDPSLHPFERPREYTRALNAVKLDRLFAKPFVGALDGHSDSVSSIATSNRSLVAFLSGAADGEIRVWDLPRRKCVWNSYGHKGSVRGLTVAPNGGIFYSCSEDKTVKQWSLEVNDDDEEIPQALSTFTSKEPFLGIDHHWS-KDLFVTCSSKVQVWDPHRSDPTHEFSWGA--DSITAVKFNPA---EESLLASCGSD----RNITLYDIRMASSMRKVVLDMRSNALAWNPMEPFNFTVANEDHNLYTFDMRKLNRALMVHKDHVSAVMDVAYSPTGREFVSGSYDRTIRIFSINSAKSREVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESNKKLGKVTPRERRKLEYNESLKERYQHLREI 388
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 112098.XP_008607236.1 |
| Preferred name | DCAF13 |
| PFAMs | Sof1,WD40 |
| Model size | 1155 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K11806 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000151,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006464,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015630,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030054,GO:0030331,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031461,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035257,GO:0035258,GO:0036211,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043687,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0051427,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1990234,GO:1990904 |
| Exons | 13 |
| Evalue | 1.16e-33 |
| EggNOG OGs | KOG0268@1|root,KOG0268@2759|Eukaryota |
| Description | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| Cds size | 711 |
| COG category | S |
| BRITE | ko00000,ko03009,ko04121 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681388010.2162366-CDS-H-akashiwo_Contig847:419385..419487 | 1681388010.2162366-CDS-H-akashiwo_Contig847:419385..419487 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 419386..419487 - |
| 1681388010.2294366-CDS-H-akashiwo_Contig847:420579..420658 | 1681388010.2294366-CDS-H-akashiwo_Contig847:420579..420658 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 420580..420658 - |
| 1681388010.2433875-CDS-H-akashiwo_Contig847:420970..421035 | 1681388010.2433875-CDS-H-akashiwo_Contig847:420970..421035 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 420971..421035 - |
| 1681388010.2577114-CDS-H-akashiwo_Contig847:421322..421385 | 1681388010.2577114-CDS-H-akashiwo_Contig847:421322..421385 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 421323..421385 - |
| 1681388010.2733319-CDS-H-akashiwo_Contig847:430356..430420 | 1681388010.2733319-CDS-H-akashiwo_Contig847:430356..430420 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 430357..430420 - |
| 1681388010.2859087-CDS-H-akashiwo_Contig847:430712..430922 | 1681388010.2859087-CDS-H-akashiwo_Contig847:430712..430922 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 430713..430922 - |
| 1681388010.2955003-CDS-H-akashiwo_Contig847:431826..431892 | 1681388010.2955003-CDS-H-akashiwo_Contig847:431826..431892 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 431827..431892 - |
| 1681388010.3053808-CDS-H-akashiwo_Contig847:432058..432120 | 1681388010.3053808-CDS-H-akashiwo_Contig847:432058..432120 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig847 432059..432120 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681388010.3178706-UTR-H-akashiwo_Contig847:432120..432142 | 1681388010.3178706-UTR-H-akashiwo_Contig847:432120..432142 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig847 432121..432142 - |
| 1681388010.328726-UTR-H-akashiwo_Contig847:432727..432837 | 1681388010.328726-UTR-H-akashiwo_Contig847:432727..432837 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig847 432728..432837 - |
| 1681388010.3395655-UTR-H-akashiwo_Contig847:433071..433130 | 1681388010.3395655-UTR-H-akashiwo_Contig847:433071..433130 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig847 433072..433130 - |
| 1681388010.3504124-UTR-H-akashiwo_Contig847:433316..433391 | 1681388010.3504124-UTR-H-akashiwo_Contig847:433316..433391 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig847 433317..433391 - |
| 1681388010.3624296-UTR-H-akashiwo_Contig847:433479..433588 | 1681388010.3624296-UTR-H-akashiwo_Contig847:433479..433588 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig847 433480..433588 - |
| 1681388010.3718712-UTR-H-akashiwo_Contig847:433740..433809 | 1681388010.3718712-UTR-H-akashiwo_Contig847:433740..433809 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig847 433741..433809 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig847.6.1 >prot_H-akashiwo_Contig847.6.1 ID=prot_H-akashiwo_Contig847.6.1|Name=mRNA_H-akashiwo_Contig847.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=237bp
MWGKVCSIQLTIIGEIPNLLRLAAAQLIFGTRKRTEPVHSYKCACLRTSY
TSYSFSFVCLCHPLLLANPSSIPLGYRNKYIYAQVILQMRTNKVAWNPME
PFYFVAANEDHNLYTFDMRNMERAIVIHKDHVSAVMDVAFSPTGREFVSG
SYDRTTRIFGYRSGKSREVYHTKRMHRIFCVNFSADSRFILTGSDDTNIR
IWKARAAKPVAKMALREERKMAYRESLKKRFGHLPEV back to topmRNA from alignment at H-akashiwo_Contig847:419386..433809- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig847.6.1 ID=mRNA_H-akashiwo_Contig847.6.1|Name=mRNA_H-akashiwo_Contig847.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=14424bp|location=Sequence derived from alignment at H-akashiwo_Contig847:419386..433809- (Heterosigma akashiwo CCMP452)
GTCAAAATAAAAACTATCAGCCGGGTAGAGGAGAAGTACACGAGGGAATG
TCGAAATGATGTTATGAAGGTGGGGGGGGGGGGGGCGATCAAATCTGCCA
AAGGGCAACATGCGGGCATTTTTTTTTCCTGCTATACGAACTTGATGCAA
GCAGGTGTTTCCTTCTGCCTTTTTCCAGCATGTAGTAGTTTATGACAACT
GTTTTTCAACTGAATTTGCAGATGTTTCGAAATAGGGACCCGAAATTGCA
CCCTTTCGAAAAGGCGCGAGAATACACTCGCGCACTGACAACAGTGAAAA
TTGAGAAAATGATGGCAAAGCCATTCATAGGTGAGGCCTTGACCGTCCTT
CGTAATAAAAGTTCCGTCTAATTGGGCCAATTCGTTATCAAAACCTTGCA
TTTGTGTCGATCATTCAGGCGCTCTTGATGGACACTCTGATGGTGTCTGG
TGCACTGCAAATGCAAAAAATAGTCTCGTCCAGTTTTTTTCAGGTGCATA
TATTTTATTCGGGCTCTACATCACAATTTCAAATAGTACCGAAAGTGAAG
GAAATTTATGGTTTCTGTGTTGTTAAATGCTTTTTATTTGTTGCCTATAT
CTATGCGTTGAAAGTTGGGCCAGACTTCAACCTTTTAAGGATCTTCTGAA
AGTCATTATTTATTTCGATTCTGATCCAGGTTCGTGCGACGGTGAGATCC
GTGCATGGGATCTTGCCCAGAAAAAGACTGTTTGGTCAGTGAATGCCCAT
CGTGGTGAGTAAAAAATGACTTAACTGACCTGAGTTGTGTGTATCCAGAC
ATATAAGCAGAGCAGTAGCATTTTTTTGCCCATGCACATTCACAAATGCA
AAGCTTTGTTGTTGGAGTTAAAGTTACTTCTGACAGATTACAAATAATAC
CAACACTGTGACTTACATCATCTGCGCCATCACCCTCCTTTTCTCTTACC
TTGGCAAATTTGCAATCAAAAGGCTTTTGTGAGAGGACTCACTGTTGCAC
CTAGTGGTCGTACATTCTATTCTTGGGAGATGATGCTGTTGTCAAACAGT
GGTCAGTTGAAGTAGCACACAACCTCCAAGAGGTATGGAACTCGGCTATG
GACAGTCATGTTACAACAGCTAAAAAATAGGGTTATACTTTTTATTGTTC
TATTATTATAATTCTGGTGGAGAGACACACCATTTTACATTTTGGTAGCA
GTTTTTTTTTATTATTATTTTTATCTACTACGTTTATTCATTATTACACA
ACAATGCCACCCCCATAAGACGGTACAAACTTCACTGCCATTGCACATAT
AGCCAAATTCTGGCAACTCATCGAAGCAGTTCCTCGGTATAGAAGTGACC
TTGGCTATACTCCTAAAGTCTTTGACTGTTGGGCGATGTTCCAGTGATTC
ATGGCGCTGCCTTACTTCCAGCACTCCAGGCTTTTCTTCTTCAAGCCTCT
TTCTTCCAGCCTCTCCATCTCAACAGCAGGTAAACCCAGAGGGGGGGGGG
GGAATGGCCAGCCAGGCCTAAGATTTAAAAGGGTGCTGCGCCTTCCCTGT
CAAAGCCACTACCGCCCAACCAAGTGAAGCTCCATACAAATGGTTTCAGC
AGCCCATACATACAATTGTTCCACACCATATATATATATTTCTTTATGTT
TGTATTGTATTGCGCAGCAACCCGAGCCTCTTCGGACGTATGTGGGGAAA
AGTGTGTTCCATTCAATTGACCATCATTGGAGAGATCCCAAATTTGTTAC
GGTGAGCCTAAATACATCATTGAACTTCATCAATTATATAACCATTTGAA
AAATATTGTGTTACTATAGCCTGTAAAATAACATGTTGTTTGCAGGTACC
ATCATTTGTATATCAAGGGCTAAAGGAACCTTTCACCCTTTCTGCTTGTG
TATGCCTCATATATAAGACTGGCAGCAGCGCAGTTGATATTTGGGACTCG
AAAAAGAACTGAGCCGGTTCATAGCTACAAGTGGTGAGAGTGCAATCTGG
ACCAAAATTCACTTCTTTACAAGTATACAAGCAAAGCAGACCCCATGGAC
CATCTATATTTGAGTGCCCTCAACCATCTGCAGCATCCAAACAATGTCCA
AGTCAGACCACAACGCCCTTCTGGCCTCTGCTGACTTTATAATATGCGTG
TGTGTGTGTGTTTTGTTTTGGTCTCGTGTAAGCACAAAGTGGAAAAATAG
TTCAGCTAGGCCAATGCTACCTCTGCTCATGTCATTTGCATTTTCTTTCT
GTCCCTTTTTTTTTTTTTCTTTTTTCTTCTAATAAGACTTCTTCTGATGT
GCCTGGGAGACACTATGACGTTGAAGCTGCTTTCTGCGAGTGGGACCGAA
CCCTCCACGCTGCTGCCGTTGAAGAGTTTCACGAGACTGTTCCATACGCA
CAGACCCGTTGCGCCCGCCAACCCCCCAGCCTAGGCATCGTCCCCCCCTG
CCGCCCATAGCCAGGGGCGTGGAAAGCCGGTTGGCTCTGTAGCGCTTCCC
AACCAGCGGAGGCCGACCTCTTCGCCAGCTCTTGATAGCGACATCTCCGT
GGCACTGTACAGACGCCAGCAGCGGCCCGCCCTGCGCAAAGGTCGCCGCC
GCCCGCCGCTACCGCCGCCGCCGCCCTTCCCCCCAACCCGCCCCCGGCCG
TTCGCTGGCCTCCCGGCGGGGGACCGTACCGACCATATGTATATATGGGT
ATGCGTGGTTGGTGTAAGGCGCGTCGGCGGCGAAACTTCTGTCCTTGGTA
GGGATCTCTCTGGCCGCGGCCAGCGGCGGTCGCTTGGACCCTCTTTCTGC
CCTTGGCGTTCGTTGACCTCTTGAGGTTTTGCCGCCTCGCTTTTGGGTGG
AGCGGGGGGGCCTCTTTTCATGGAAGTACTCGCTCAGTGCGTGCTTGCGC
ACCTCATACACCTCATATAGCTTTTCGTTCGTGTGTTTATGCCATCCCCT
ACTCCTGGCAAACCCCTCCTCTATACCCCTTGGCTACCGGAATAAATATA
TATATGCTCAGGTCATTCTGCAGATGCGTACCAACAAAGTGGCCTGGAAC
CCCATGGAGCCTTTCTACTTCGTGGCCGCTAATGAAGACCACAACCTGTG
CGTTGCCTCATCATGCCTCTGCCTTGTGTGCCAATGTGTACTGCAACCCC
CACCCTGCCCTCTTCCAGAACAGCGTAAAGCGGCACCCCCTAATAGTCCA
TTTTTCATATAGCTTTACTTTTTTCTGGTTGGTATATGGAGTAATTTCAT
GAGCTGCAATGCTTGCCTAGTGCATCATAAATAGATAATGATGACTTAGT
TGGTCCACACAATCAGTCAATTATTTTTCTAATATATATGCAATCCTCCC
TTTTTCTTGCGCTTTTCATCATGCTTCTTATACTAATAGCTACACTTTTG
ATATGCGCAATATGGAGAGAGCCATTGTCATTCACAAGGATCATGTCTCA
GCTGTGAGTTTTTTTTGTTGTTGTTGTAGTAAAATATATATATTTGCGCC
TTTTTTGTTGTTGATATTATACATATATATAGCGTTGAAGTGATGGCAAT
CACCAAGTACGCTCACAAAGTTCACACCGGCAGCGACCCGCAGCACCAGC
CTGGACAGCCGGCAGTAGCAGTACCGTGGCCCACAGAAACCCACGCGCAG
TTGGTTTGTTTGAGCTTGAGAAGAAGTGGAGGTTGGAAACTTAAGAAGTG
GAAACAAAGAGGTGGAGCTTCTGACCCACGCACTCACCACACAAAGTTCA
ATATAGACTAGCTAGCATCAGCAGCAGCAGGAAGTAGAAGAAGAAGACCA
GGCCACCGCCACAACAGCAGCATTTTGTACTACTAATAATCCCACTACAA
TCCAATGGAATAATCAGCAAAACAACGGTTATGGGTTTCTCCGGCGCTTT
CCCTGTGGCTTCGAATGGTACGGGTTTGGTGAGCTGTTATACTCCGCCCA
GAGCTGAGCTGTTATACTCGCTTGTGTGACGGCTTGGTGAGCTGTTATAC
TCCTGGCAGATCGCTGTGTGACATGTCCAACGGGAACGACAAAGAGGGTG
CTTTTCGACTGTGAATGACGTGATGATTGGCTTGGACAACTGTGGATGAA
CTATTTCGGTGTTATGGGGAGCTTTGACCAATCGTGCCTCACAGCTGGAT
CTTCTTGCTTTTGGCCGATGAAATTTCGTCCTATGAAAACTTGGAGGCTG
TTTTTGCTTACAACCGCCAATGATATTCTTGGCTTTTCCAAAACATAGAA
AACGTGAGCCGAGTTTGCCTTCAAATCGTGGAAGATTGTGGTTTTTGCTT
GTTCTGCTTCTACCTTGATTCAGCTTGGCACAGCACACCTTTTTTAAATT
CAAGGGTGCCTTGAGCTACTGCATGTTCTGCTGGTTCAGTATGCTCATCC
CTTTTCTTCTGGGATCAACGGTAATTTTTTGAAATGGAGGGGCTTATGAT
GATGTTTCTTTCTGAAATGGAGGGGCTTTCTGACAACCTGGAGGGGTGAC
TCAACTCCCTGGCTTGTGATGCACAGTTCACTTGGTAAGCTGGAGCAGCT
TAGGAGGGGATTTGTTCACTGTGCTCACTCCCTTGATAATTGTGGAGGGG
CGTTGAAGTGACGGCAATCACCAAGTACGCTCGCATAATTCACACCGGCA
GCAACCCGCAGCCCGCAGCAGCAGTACCGTGGCCCGCAGCAACACCACTC
GCAGTTGGTTTGTTTGAGCTTGAGAAGAAGTGGAGGTTGGAAACTTGAGA
AGTGGAAACAAAGAGGAGGAGCTTCTGACCCACGCACTTGCCACGTAAAA
TTCAATATAGACTAGACAGCACCAGCAGCAGCAGGAAGTAGTAGAAGAAG
ACCAGGCCACCGCCACAACAGCAGCATTTTGTACTACTAATAATCCCACT
ACAATCCAATAATGGAATAATTAGCAAAACAACGTATAGTGAGAGTTAAA
TTCATGTATACATATATATAGGTATATATATTTTGTGCCATCATTCAATA
CGTATTTATATGGTATATGGTATGGTGGTTTTATTTATACACACACACAC
ACATATATATATATATATATCTTTTATGTATCTAAATTCGAGAGATGCCT
TAATAGTGGCTTAAAATACCATATGCTGAAATAAGGCCAAAGGCATTCAT
GGTATATGAAGACAAATGCTCGTGCAATATTTATCTGGAGGAAAACAAAG
AACAACATGATGCAGCAGCATACTTCTTCTTCTGCCTCCTTGTGAGCGAC
ACTGCCATCATGGTGAAGTCTTACGGATCCTTAAAGGCTAAATTTTTGTG
GCACTTTACTTATGCTTCTTGTTTTGCTGAGTGTGGGGTTGATTTCCGGT
GCAGGTGTGGGAAGGTGGGCGGAGCCGCGGTGCAGATGGAAGGAGCCCCG
GAGCAGATGGGCGGAGGAGCGAGATGCCGGTGGTAGAGCAGTGTGCGCAG
TATGGCGGATGAGAAGTACACGGTATTGCTGTGAGCATGGCTAAAAAGAA
GATGAAGAAGATTGTGCTGGTGATGATTGAAGATGAGGAGGAGGAATAAC
ATGATGGTAATTCTCCTACAGGTGGTGGAAGTATTGTGACCAATGAGGTT
GTTGAGAATGGAGAGTAGCCAATAGTGTAGTTGTAAGTACAGGAAGAAAC
TGTAGTAGTGCTGGGAAGAAGGGCTGAGTTGTGAGAGAAAAACCCAGTAT
TGCAGCAGCGTAGTGTAGAATTTTGTATTACTTCTGATTAAAAAAGAACC
CTTAGCAGTCCAAAAGACCTCAGTCTAAACACTTCTTCCCACAACAAAAA
ATGTGGGAAGAAGGAGAAGATATTTTCTATCATACAGTTGATATAGTTTG
AAGAAGACGTTTCCTAATATTGGCATCACTGGGAATCCAACCCAGGACTG
CTCAGTAGCAAGTCATGCCGCTATTATAGGCGGCTAAGCTGGTTGATGAG
TACGCTACTACACCTATCATCTATCATCTGAGGTGTAAATGTGTGTATAT
ATTATTATATAATCGAAATCGTGCTTCACATTATTATATAAGAGAGACAC
AGTCTTCTGAAAATATACTGTAAAAACCCCAAGCCCGCTCCCGGTCCTAA
AAAGGGAAGAAACTGGTGACACTAAGGACGGATTCCCCAACCAATGCATG
GCTTGTTGTCGATGGCGCAAAGTTTCAAAATAAAACATATTATTTTTTTT
TCAATGATGACATAGAAGCATTCTCACTCACTACATCTACAAAGAAATGA
GGGCCGCGGTTGGTTGCGGCAGTCCCAACAGTAAGGATTTTGCTGGATTT
AGATGAAGCGGAATTCAGTCCCAATAATAAGGATTTTGGTGGATTGAGGT
GAAGCGGAATTCGATCAGTTACTACATATTCTATAGTGCCCCGTATATGT
ATATATATATATATACATATGTCCTCTGCAATCATTCCTTCGAGGAGGTT
TCATCTTTGTCATTGTTGCTACTATATGTTTTCATGGTCGTCTTCACGTT
GGTGCCAATCACATCTCATATAGATCATTGTTTTGATCCGAACCAGCAGC
GTAGCACAAGTTTCATTGTTTGTCAATGTTGGAGAGAGGAAATTCATGAG
AGGGTTCCAATCGCTTGTCTTGGCCCAGTGTTAGGCTTTTTCCATCGGGA
GATGTCTATCAAGAGACCTGGTGTTGATCTGTTTTTGATGGATAGTCGGT
CGGTTATCGGTCACCGTGGTTGGTCTATACAACACATCTATGGAGAAACC
GTGCTTTGAATGTAGAAATGTAATACTAGTACAAGAGAAATCAGCCAAAT
CGCCATAACCAAGACCAGGTCCGAGACTCCCTCCCAATCTTATTCTCCGC
CTCTGCCTTATGAAACGTGAAACACGACACACATACGTTGTTGTGTTCGC
TTAGCAGGAGGGCATTTCGGGATAGAACTACCCGGTTCGAACATTAAATA
TATTGTGATCCATTGCAATAACCGAGAACACAGGAAACACGAACAAAAAT
AACCATGATACATTGAGTTATTGTAGATGTAGATCAAATAATTCATGATT
GATTGTTTTAACTCATGAGGAAAGAAGGCTGCCCTATATATTTTTGGTCA
TATTGTTGATTGGCTATTTAGTTAGGAGGAGGAAAAGCCATCCCCACCAG
CATACGATTGCATCAGTGAAATTACCTACACCACCTGGATTAAGGTGTAG
TAGAAAGGAAAAATCCTAATATCTCATGAACTGCCATTTACTTTTTGATG
CCCCTTTGTTGTAGAGCTTATCTCATGGTGCCTTACCTTTACATTGGCTC
AAATGGCATGGAAGCATTTATTGGAAAAAAGTTACACCAGTCATGTGTGA
ACAGTTAGTCATTTTGGTGCTACCAAAAATGCTTATGGGGGGTAGTGGGG
GGTATCTAGCCCTTCCTTGGAATGTGGCCCAGCATGTGCCCAAGTTGGGT
GGACATACAAATGGCCAGTCTGGAGAGCCATGGCACTGAAAATAGGGGCT
CATTCTTGCAACAATTCTACACCTTTTTGGTTGATGTAGGTTGGCTAAAC
ACAACAGCTTACCGGGCGACGGCTCGCGCTCGGGGGACATCAACACCACA
ATGACGTGGTTGTTGTTGTTCTTCTTTTTTGTATTTGCACGTGCCCCGAC
CAACGACAACCACCACCACGCGTTACAACCCCGAAGAATAATTACACAAT
CATCGTGGGGGAAAAATGATGTTGAAGTAGAAGAAGTGGCTGAAGAAGCG
CGGGGCTGTTGAGTATAAGTGGCCGTCACGATAAACGGGGGTGTTTTGCG
GCGGAATGGCCCGAAAATAAAAATCGCGTTCTACAATGGCGCCGTTCGTG
GTAATTAGCTCAAAATGCGCAGAAGGATCTTCCGAAAATTTTGATGCATC
GACCCCAGTTGGCGCCATTTTTTTTTTTGAGTTATATAGCTTTTTAGTAG
GCAGTTTAAAAATCTTTAATCAAAGGTCATATTTTTTAAATCTTCGCGAT
CATACATGGATAACTGCCCGTGCGGTTAAGGCGCACGACTTGGTTGTTTT
TTACGTCGGGTCCGGGTTCGAGTCTTGGCGTGCGGAATCTGGCGAAATCT
GCCGCACCTCCCATGAAGCGCTGCCCCCTTTATTGTGACGGCCACTTATA
TATGATATGATGTTTGTCGCCTTTCAGGAATCTTTAGGATTTCTGGACGT
GTCCTTAAGTAAGCTTGTACTCCTTCATTCGTGTATCGGTTGACCCTACT
TTAGTCGGTAGTTGCTATACATACGGAGGACAAGCGTTCCACCAATCTCT
CAGAGAAAGACAATGACACGCCTGGTTGCACCAGAAATATGCATTTGCTC
TAGAATGAAGAATAGAGAAAAAGCCGGTGTTAAAAGTTGAAAGGTGGAGA
AAGAAGATGTACGGAGTACAAGAAGGTGAAGCGGTGCAGGGAAAAGGGTT
TATTTAAGCAATCACGAGAAGGAGGTTCACAAAGGTACAGTTAACTCAGC
AGGTACCGCGGCGGAATAGAGTTTAAACTCTATGGAAATCAGGGCATTCG
ATTCGCCACTATCCTCCGAAGATACGAAATACACGTTGTGCATAGGCTGA
AATTTCCGACGATGAAGAATAGAGTTTAAACTCTATTTCTCGAAATCGTC
GGTACTAGACCCTCTCTCTTCATACATATCTCTCGTTCTAAATCTTACAG
CTTTTACAAATTGTTCTTATTACTGTCTTGGTTCGACATCACAAAATATG
ATTGGCTCTTTGTCGTCCAATAGAAGTATTACTTTCCTCATTTTGCATGA
TCGTTGAGTATGGTCCAATGAAAATATTCCGTTAACGCGGTGCAATATTC
CTTCCGTTCGCCTGTAATGGATGAAATGCTTCAACTTCGAGCCACACCCG
CCACATGAAAGTTCGGGTTCGGCGAAACTGAAACTTTGTCAACGGAAAGA
TCGTCTTTTCATATGAGCGGTGGATCTTGATAGAATTCTAAAAGAAATAT
GAAAATGCTTGCTTGATTCAAAGCATCAAGGTATTCAGTTCTGAACCACT
CTTTTCGGTTGATTGTGCGTACTTGCATTCACAAATATTATTGGTGTAAC
AATTCATAGGCTTTTCCCGTTTGACGAATCATAGTCGGACCTGAAAACGC
ATCCATTCAAAATAAGTCAATATCATTGGCTGGGGAGTGCCGTATCCTGG
AATAGAGTTTAAACTCTATTCCGCCCAGACGGTACCTGCTGAGTTAAGAG
GCAACACTAGAGATCTGTGGAATTCTAAATACTTTTTGAGGTAAGCAAAA
AAATTGCGGGGAATATTTCAATAGTCATAATCCGTCTATATCCATTGAAA
GTTATGAAAATCTTGCAAAAGCTCGCCCACTTTTGAAAGATTTCTTCGTG
TTGCTTCTTTAGCATTTCATTATATATCAAATTTTCGCTCTTTTATAATC
CGTCTATATCCATTGAAAGTTATGAAAATCTCGCAAAAGCTCGCCCACTT
TTGAAAGATTTCTTCGTGTTGCTTCTTTTGCATTTCATCATATATCAAAT
TTTCGCTCTTTTCCTCGAAAATTCAGAGGCTATAAAAATGTAAAGTGGCT
CATCCACAAATAGATACAACTTTGTGTGCATCGCCAAAAGTATATAAAAT
AAATTTCAAATTTTTAGACAATATGCACCCGCTGATATGAAAAAGCCCAT
TTTTATTAGGAAAGCAATGAAGGTTGACGATGTAGCCGGCATGCAAGCGT
CTGAATTGTCATCCATAGCACATTTATCTCGATATCATATGGTGCTGTCA
TGAAAACAAGTCTCACAATGGACCCCTAATGTAAACCATCTCGCATGCAC
ACAATGATCGCCGAACAAACGGTTCTTGAAGAATGCTTGTCGTATAGTGT
ATTTCAAGGTGCCCAAATTGGATGAGAGGTAGATCACATACCAAATACCA
AATCAACAAAGCATCACGAGGTTTCGTTTCCATATAGGCATCATCTGATT
ACAGGGGTCCATTCGCCAATATATTGTGGGTTGATATCTGATTCTTTCGA
ATCAGAAGGGAAGGAGAAGAACCAGCAGAGAAGCCAACAGCAGAATTATG
TTCTGGTGAAACTATGGAAAGCTTTTGCGTCATAGTCAGATAAGTTTTAG
GTGATGTTCACGTGCGTGCCCTCCATATACAAATGTTTGCCAGACACACC
CATTCCATTCATTCGTCGTGAAACAAAACGAATTGAAGTAGAAGAAATGG
TTGAAGAAGCGCGACTGTTAAGCATGTATGTGATGTTGTAGAATAAGGTG
TACCACGAAGCAGCTGTAACGGGCCCTTAAATGTATTAAATTTGAATAAA
CATTATTATTATTATAACCAAGAATTACAGCGGCTGCTCCCCCAAATTGG
AGCAGCAACCCCGGCCTTTGGTGAGATCGAGAGAGAGAGAGAGCCACACA
CATTCCATCGATATATTGTAGTGTATATACTGGCACGACAGCGATTCCGA
GACCGGCCCCTACAGGGAAAGGCGCGAGGGCAAAGCGCCTAGGGAAACAA
GCCCGTGAGCGGCTTCGACGGCAGGAAGCCAAGAAGCGAGACCAGCCTTC
CATCAGGAGGCCTGAGCGCGCTCGAGCAGGTAGCCCAAAGGATAAAGTCG
AGCAAAAGATGGGTTGCCAGAAGCAGGCACCAGCAGTCTCTGCTGCTGCT
GCTGCTGACAGCAACAACTCAGCTGCTGCTCCTTCATCACACAGGCCACC
TGCTGGAGACGGGAAGAATGATCTAGAAGAGTTCTGTGGGCGTTTGAGCA
GAAATCAACGTATTGTAATTACGAACTCGGAATTTGGCGGAGCAAACATG
GAGGGGGGAAGAAATCCGATGCAGCGGGGAGCGAGCGAGGAGGGCGGTTT
GCCAATGAGAACGGCGAGGGATGCGGGGGGCAGTGGGGAGGAGGAGGAGG
AAAAAAGAACAGCTGCGATGGACGTTGCGTCGTCAATCATCAACAAACTG
ATCGACAACGCGTACGATGTTGGGGAAGTGCTGCAGCGAAAACAAGCCGA
TCAGCTTGGTGGGGAAATCGAGAGTGGCATCGAGGGAAAGGGAGGGTCAT
CTGGGGAGTCGAGTGGGGATACAGACTCTGAATCGAATGATGAGGAAACT
GAATCGAGCTCCGAGGACGATACAGCAAGGGCTGTCGGCACAGCATCCAG
GGCAAGGGAGAACTGGAAGCTTCAAGTGACGGCAGTGGAGGATGGGTTCA
CGCGGGTCAGTACGAGGGAGGAAAAGAAGCAAGCGAAGCGAGAATTGCAG
AGGGAGAAGGAAAAGAAAAGAGTGGAGCTTGCGGCGGCGGCGGAGGGAGG
AGGAAAAGCATGACCGCGAAATACAGCGAAAGCTGTGGGAGGCCAGCCAG
AGAAATCCTCATACTAGAGCCAGGGCTGCGAGAGAGCGCCAGGAAGCTCG
GGCCAAGGCGGCGGAAGGAAGGGCGCAAAGGCCTATGGCCCAGAGAGGTG
GTGGGGCTGCTGCCTTGCGAGGGAGGGTAGGCAGGGCGGCCAGGGGTGGG
AGAGGGAGGGTGGGGATCCGGGAGGGTTAACAGGGACCTGCCGGAGGTGG
GTTGAGCACAGGAGGGCCTGCTGGAAATGGAGGGAGGGCAGCAAGCGCTG
AGCTGCACCCCCCAAAGCAAGCCACGCGACAGGATTGCTGGGACTGCATG
TGTCGAGTCGCATGGATCCAGAAGCAGCGAAGGACCAACAAGAACTGGGA
GTGGAAATCTGATGAAGAGCCTGACAACTGTTAGTCTTCTGGGTGGAAGT
GGGGCAGGAAATGGGATGAGGAGAGTATCTGCTATTACAGTTAAGGTGTG
CAGCTGGGACCAGTGTGTTTGTTATATTTTCTTTCTTTTCTTTTTCTTTT
CTGAAGTTTTGGTGATGGACCAAGGAATAAGTAGTGGGAACTAGAAATGG
CAGGGTCCACATATGGAGGCCGGGGCTTCGGTCCTTGTAGTTATCCAAGT
GGTGGACTTGAAATAAAACAAAATCATCATCATCATCATCATATATATAT
ATATATATTATGGGTTTTATCATTATATGGGGGAAGTAGAGCTGGGATAT
TATATTGGCATGGGGATTTCTTGAATTTTGGTGTTCATGAATACTGTAAG
GGCAAAGAAGGACCTAGAAGAAGAAAAAGGATCTGTTTTCTAAGTATGGA
GGCTGGGACTTCGATCCTTGTAGTAGTATTCTCATCACTATCATCATATG
TATGCTTCATTTGAACCTGCACAGTGCATAGTTTTCATCTATATAGAGAA
GGAGTCAACACCACACTCAAAAGTGAAGTTCCAGAATTGGATCATCTGAC
TTACTGGTGTGATAATGATACTTTTTCATCACTCTCACACACTCTCTCTT
TCTTCTTTTCCTGATGATATCTAGGTCATGGATGTGGCATTTAGCCCAAC
AGGACGAGAGTTTGTTTCTGGCTCATATGATAGAACGGTAACCCTCTACA
CACAACTTACGTATTGGAACTGCACACACTGCAGACAGCAATGGTTTGTT
AAGAATGATGCCGTTGCTGCTGCAATATTTTTATTTTTTGCTGTTGCTGT
GGTGTCCGATAACATGAGCAATTTTATTGATGTCTTTAAAGTTTTGTGTG
CATGTCAAATCTCTCTCTCTCTCTCTCTATGATGATGATGATGATGTTAA
TTTAGTTTCAAGTCTAACCTTTCAAATCACTAATAATATAATAATATAAT
AATAATATAAAATATGATCATCAGACGAGAATTTTTGGCTATCGCTCTGG
AAAAAGCAGAGAAGTTTACCACACTAAACGAATGCATAGGTAACTATAGT
AGTACACATGAATTTACATCCAGTCTTGATATGAAATTCAAGAAATCATG
AAGAGTATGTGCTGAAAGTCACAATCTGCACGCTCCACTTTTTCAACCAA
ACTATTTTTATTATCAGTTTTTTTTTGTTTTTCTTCTACATTTTGGACGA
TGCATACAACCAACATCACATCACCGTGCTATTGTGCCCCAGCCTCTCTT
GAAATACTATTGGTAATACGTAATATATTCCACCACCACTAAATTCTTTT
TGAATACATTGATGCCACCATGCTGATCACGATGATGATAATGCCATCCA
GGATCTTCTGTGTGAACTTCAGCGCGGACTCCAGGTTCATTCTGACCGGC
AGTGATGATACAAATATTCGTATCTGGAAGGTATGGTGCATTTTTTTTTT
TAATACGTTCTCATGCCTCGCCAATGTATTATATATTGAAATGAAAGTGA
TCACTGATTGTACGGAACAATCAATTGATCTCCTAGCAAATGATACGCTT
CTCCAGCCTGACGTTTCGACATGAAGTCATGCCTTTTTCACAGAGTCACC
AACCAATATTATAACAGAACTCCGTGGAACTTTTCGCGTAATACTGCACC
ATGGGGCCAAAATGCTTTCACGGGGATCGAATCGGTGATTTAATCTTTAA
AATCAACGCTCCCCGTCATCGGTCGAATGGTTTAGTTGTAAATTATTCGA
TACCGTGAAAAGAGATAGCGGGCTCGATCCCCGCTGAATGAGGTAATTGA
TTGACGTCAAAATGCGTACATTCAGAAAACATACACTTTGTTACGTGTTT
TCCACGGCGACAAGCTAAAAAAGAAGAAGATGGAAATGCTGCAATCTCAC
GACGACCGCATACACACATAGCCACCTAAATAAAGCCTCGTATCCTTCTC
TAATAGCTAGGCGCTATAGCGAAAAGGGATGTATATATGTATTGATTCGG
GTTTTGGGATTTCATGTTTAGGTTGTAGTACATTGCCACAGGGACATCTG
CATAAATGCAAAAGGTGTATAGGTTGTTTTGATTAAATTTAACTTGTATA
AGTATTTGTGCTTGTGTTCTTAGGATAATTTGAGTAGTGGTATTGAGATA
GAGCAGTTTGAACTGGAAGGGTCTGCTTATAGAAGCTAGGGGCTCTGCCC
CAAAAGCGGTTTGAAAGGCTAGACATCATCAGTGATCACTTTTTCATTTC
AAACAGCAAGTAACAAAAAAAAAAAAAAAAAAAAACGTACTTTTTCTGAA
AAAAATGCATATTTAAACATCTGCTGCTGCGTGCTACATCAAAAGTCAGT
AGAATCTCAAAGGTAAAAGTTTCTTCCTTCCTACTCAAGGTTATAAACAG
GGATGATGTGGGGAAAAACACCAGGCATGACACCGGAATCATCCCAAGTG
CCCTCCCCGCCCGCCCGCCGCCGCCGCCGCCGGGGCCCGCCCGCGCGGTG
TGGTGGTGGGCAACACCACCAGGCCCGGGCGGCCAAGCCCGTGGCCAAGA
TGGCCCTCCGGGAGGAGAGGAAGATGGCCTACCGCGAGTCGCTCAAGAAG
CGCTTCGGCCACCTGCCCGAGGTG back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig847:419386..433809- >mRNA_H-akashiwo_Contig847.6.1 ID=mRNA_H-akashiwo_Contig847.6.1|Name=mRNA_H-akashiwo_Contig847.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=711bp|location=Sequence derived from alignment at H-akashiwo_Contig847:419386..433809- (Heterosigma akashiwo CCMP452)
ATGTGGGGAAAAGTGTGTTCCATTCAATTGACCATCATTGGAGAGATCCC
AAATTTGTTACGACTGGCAGCAGCGCAGTTGATATTTGGGACTCGAAAAA
GAACTGAGCCGGTTCATAGCTACAAGTGTGCGTGCTTGCGCACCTCATAC
ACCTCATATAGCTTTTCGTTCGTGTGTTTATGCCATCCCCTACTCCTGGC
AAACCCCTCCTCTATACCCCTTGGCTACCGGAATAAATATATATATGCTC
AGGTCATTCTGCAGATGCGTACCAACAAAGTGGCCTGGAACCCCATGGAG
CCTTTCTACTTCGTGGCCGCTAATGAAGACCACAACCTCTACACTTTTGA
TATGCGCAATATGGAGAGAGCCATTGTCATTCACAAGGATCATGTCTCAG
CTGTCATGGATGTGGCATTTAGCCCAACAGGACGAGAGTTTGTTTCTGGC
TCATATGATAGAACGACGAGAATTTTTGGCTATCGCTCTGGAAAAAGCAG
AGAAGTTTACCACACTAAACGAATGCATAGGATCTTCTGTGTGAACTTCA
GCGCGGACTCCAGGTTCATTCTGACCGGCAGTGATGATACAAATATTCGT
ATCTGGAAGGCCCGGGCGGCCAAGCCCGTGGCCAAGATGGCCCTCCGGGA
GGAGAGGAAGATGGCCTACCGCGAGTCGCTCAAGAAGCGCTTCGGCCACC
TGCCCGAGGTG back to top
|