mRNA_H-akashiwo_Contig847.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A7S3UVC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVC1_HETAK) HSP 1 Score: 301 bits (772), Expect = 6.280e-102 Identity = 146/170 (85.88%), Postives = 157/170 (92.35%), Query Frame = 1 Query: 1 KPVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGLELRGYADADFATDRDRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFP 510 KPV+VP+DP LDLFEE SL++EPRQYQSLIGALTWLTCCTAPTLATAVN+L QFLVAPTE+HWAAA+AVLAY AHQHLDE+ GGGGLE+RGYADADFA DRDRKSTSGYVFFIGHTTLSWASRKQKG+VLHSTHAELNALLE GKE LHLRQLCGFLL+LLQ D FP Sbjct: 6 KPVEVPLDPSLDLFEESSLLKEPRQYQSLIGALTWLTCCTAPTLATAVNRLAQFLVAPTELHWAAAIAVLAY-AHQHLDELXXXXGGGGLEIRGYADADFARDRDRKSTSGYVFFIGHTTLSWASRKQKGIVLHSTHAELNALLEAGKETLHLRQLCGFLLLLLQLDQFP 174
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A085LNL9_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085LNL9_9BILA) HSP 1 Score: 137 bits (346), Expect = 3.820e-36 Identity = 83/219 (37.90%), Postives = 125/219 (57.08%), Query Frame = 1 Query: 43 EEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGLELRGYADADFATDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTKPM 696 EE + E Q++ +G+L +L + P +A AV +L + + +PT+ W A V+ Y A ++ G ++L G+ DAD+A D DRKSTSGYVF IGH+T++W+S+KQ V + ST AE A E +E LRQL + + DG PT I++DN C+ +A+ R S TKHID++ ++ + + LV + M ADVLTKP+ Sbjct: 47 EESPALSENAQFRKAVGSLLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVSQKLRFS-SEGNIKLTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYVAASEACREVQWLRQLLADMEV--PQDG--PTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTKPL 260
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A226DUK4_FOLCA (Copia protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DUK4_FOLCA) HSP 1 Score: 140 bits (354), Expect = 1.320e-34 Identity = 84/236 (35.59%), Postives = 134/236 (56.78%), Query Frame = 1 Query: 4 PVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGG-GGLELRGYADADFATDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFP---PTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTKPM 696 P +VPM P + + + Y+ +G+L +L CT P ++ AV++L QF+ A E HW AA VL Y + +E+ ++ + LRGY DAD+A+D+ DRKST+G+VF + + +SW+S+KQ V + S +E +L G +EA+ LR+ L+ GFP PTIIH DN S + L + + S +KHID++ + ++ + + + V T +AD LTKP+ Sbjct: 1110 PTNVPMQPHAGELVPAATINQTLPYRQRVGSLIYLAKCTRPDISYAVSRLSQFMHAYDETHWKAAKQVLRY--LKGTEELGIKYKPCEDMILRGYTDADYASDKMDRKSTTGFVFMLNDSVISWSSQKQPIVSMSSMESEYISLASGAREAVWLRRF-------LEELGFPQESPTIIHVDNQSAIKLVKNPEMHSRSKHIDVRYHYTRELVSTGQLAIEYVHTSEQIADGLTKPL 1336
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 134 bits (338), Expect = 8.940e-34 Identity = 88/234 (37.61%), Postives = 128/234 (54.70%), Query Frame = 1 Query: 1 KPVDVPMDPRLDLFE--EGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGL-ELRGYADADFATDRD-RKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTK 690 K V P D L + E + Y+ L+GAL +L CT P +A AV ++ +F + HW AA +L Y + ++ L GG EL GYADA +A D D R+ST+GYVFF+ + +SW S++Q V ST AE AL +EA+ LRQL L+ + + T I QDN C+ LA+ S TKHID+K ++++++++ IVL T+ M+AD TK Sbjct: 163 KAVHTPADSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKY--LKTTQDLGLVFNGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQL----LLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 390
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A226DW10_FOLCA (Copia protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DW10_FOLCA) HSP 1 Score: 138 bits (347), Expect = 1.140e-33 Identity = 83/236 (35.17%), Postives = 133/236 (56.36%), Query Frame = 1 Query: 4 PVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGG-GGLELRGYADADFATDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFP---PTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTKPM 696 P +VPM P + + E Y+ +G+L +L CT P ++ AV++L QF+ A E HW AA VL Y + +E+ ++ + LRGY DAD+A+D+ DRKST+G+VF + + +SW+S+KQ V + S +E +L G +EA+ LR+ L+ GFP P IIH DN S + L + + S +KHID++ + ++ + + + V T +AD L+KP+ Sbjct: 1110 PTNVPMQPHAGELVPAATINETLPYRQRVGSLIYLAKCTRPDISYAVSRLSQFMHAYDETHWKAAKQVLRY--LKGTEELGIKYKPCEDMILRGYTDADYASDKMDRKSTTGFVFMLNDSVISWSSQKQPIVSMSSMESEYISLASGAREAVWLRRF-------LEELGFPQESPKIIHVDNQSAIKLVKNPEMHSRSKHIDVRYHYTRELVSTGQLAIEYVHTSEQIADGLSKPL 1336
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A085N351_9BILA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085N351_9BILA) HSP 1 Score: 135 bits (339), Expect = 1.280e-33 Identity = 82/219 (37.44%), Postives = 123/219 (56.16%), Query Frame = 1 Query: 43 EEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGLELRGYADADFATDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTKPM 696 EE + E Q++ +G+L +L + P +A AV +L + + +PT+ W A V+ Y A ++ G ++L G+ DAD+A D DRKSTSGYVF IGH+T++W+S+KQ V + ST AE A E +E LRQL + + DG PT ++DN C+ +A+ R S TKHID+ ++ + + LV + M ADVLTKP+ Sbjct: 225 EESPALSENAQFKKAVGSLLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVCQKLRFS-SEGNIKLTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYAAASEACRELQWLRQLLADMEV--PQDG--PTRTYEDNQGCIKVAQSDRCSQRTKHIDVSHHQLRDLCESGILSLVYCPSSEMPADVLTKPL 438
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: UPI0016051861 (secreted RxLR effector protein 161-like n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI0016051861) HSP 1 Score: 129 bits (323), Expect = 1.450e-33 Identity = 77/204 (37.75%), Postives = 118/204 (57.84%), Query Frame = 1 Query: 4 PVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGG-GGLELRGYADADFATDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFP---PTIIHQDNLSCVGLAEKGRLSSLTKHIDIK 600 P +VPM P + + E Y+ L+G+L +L CT P ++ AV++L QF+ A E HW AA VL Y + +E+ ++ + LRGY DAD+A+D+ DRKST+G+VF + + +SW+++KQ V + S +E +L G +EA+ LR+ L+ GFP PTIIH DN S + L + + S +KHID + Sbjct: 6 PTNVPMQPHAGELVPAATINETLPYRQLVGSLIYLAKCTRPDISYAVSRLSQFMHAYDETHWKAAKQVLRY--LKGTEELGIKYKPCEDMILRGYTDADYASDKMDRKSTTGFVFMLNDSVISWSTQKQPIVSMSSMESEYISLASGAREAVWLRRF-------LEELGFPQESPTIIHVDNQSAIKLVKNPEMHSRSKHIDAR 200
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 132 bits (331), Expect = 1.500e-33 Identity = 81/207 (39.13%), Postives = 120/207 (57.97%), Query Frame = 1 Query: 76 YQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGL-ELRGYADADFATDRD-RKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTK 690 Y+ L+GAL +L CT P +A AV ++ +F + HW AA +L Y + ++ L GG EL GYADA++A D D R+ST+GYVFF+ + +SW S++Q V ST AE AL +EA+ LRQL L+ + + T QDN C+ LA+ S TKHID+K ++++++++ IVL T+ M+AD TK Sbjct: 94 YRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKY--LKTTQDLGLVFNGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQL----LLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 294
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A085LQ26_9BILA (Uncharacterized protein (Fragment) n=3 Tax=Trichuris suis TaxID=68888 RepID=A0A085LQ26_9BILA) HSP 1 Score: 137 bits (346), Expect = 1.520e-33 Identity = 83/219 (37.90%), Postives = 125/219 (57.08%), Query Frame = 1 Query: 43 EEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGLELRGYADADFATDR-DRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTKPM 696 EE + E Q++ +G+L +L + P +A AV +L + + +PT+ W A V+ Y A ++ G ++L G+ DAD+A D DRKSTSGYVF IGH+T++W+S+KQ V + ST AE A E +E LRQL + + DG PT I++DN C+ +A+ R S TKHID++ ++ + + LV + M ADVLTKP+ Sbjct: 901 EESPALSENAQFRKAVGSLLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVSQKLRFS-SEGNIKLTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYVAASEACREVQWLRQLLADMEV--PQDG--PTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTKPL 1114
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Match: A0A182H646_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H646_AEDAL) HSP 1 Score: 131 bits (329), Expect = 1.760e-33 Identity = 84/232 (36.21%), Postives = 121/232 (52.16%), Query Frame = 1 Query: 4 PVDVPMDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVAPTEMHWAAALAVLAYDAHQHLDEMELEIGGGGLELRGYADADFATD-RDRKSTSGYVFFIGHTTLSWASRKQKGVVLHSTHAELNALLEGGKEALHLRQLCGFLLILLQSDGFPPTIIHQDNLSCVGLAEKGRLSSLTKHIDIKDLWIKQEIDEMNIVLVPVRTEHMLADVLTKPM 696 PV PM+ L L G P Y+ L+G+L ++ CT P + +V L +F PT HW + V+ + +E + L GY DAD+A+D DRKS SG+ FF+ +SW+S+KQ V S+ AE AL EA+ L + L + S P II++DN C+G+A K S +KHID+K +++ I N+ + VRTE LAD+ TKPM Sbjct: 49 PVKTPMEKGLQLARAGDPTAHP--YRELLGSLMYVMLCTRPDICYSVGFLGRFQQKPTTQHWQSLKRVVRFIKGTKARCLEYKQVRSAKPLVGYVDADWASDIEDRKSVSGFAFFVFGNLVSWSSKKQTTVATSSSEAEYIALSSAVSEAVWLSGILDDLKLKNSS----PVIIYEDNQGCIGMA-KNCESKRSKHIDVKHHFVRDHISNGNVRIEYVRTEDQLADLFTKPM 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig847.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig847.10.1 >prot_H-akashiwo_Contig847.10.1 ID=prot_H-akashiwo_Contig847.10.1|Name=mRNA_H-akashiwo_Contig847.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=226bp MDPRLDLFEEGSLMQEPRQYQSLIGALTWLTCCTAPTLATAVNKLEQFLVback to top mRNA from alignment at H-akashiwo_Contig847:474935..475630- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig847.10.1 ID=mRNA_H-akashiwo_Contig847.10.1|Name=mRNA_H-akashiwo_Contig847.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=696bp|location=Sequence derived from alignment at H-akashiwo_Contig847:474935..475630- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig847:474935..475630- >mRNA_H-akashiwo_Contig847.10.1 ID=mRNA_H-akashiwo_Contig847.10.1|Name=mRNA_H-akashiwo_Contig847.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=678bp|location=Sequence derived from alignment at H-akashiwo_Contig847:474935..475630- (Heterosigma akashiwo CCMP452)back to top |