mRNA_H-akashiwo_Contig847.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig847.1.1
Unique NamemRNA_H-akashiwo_Contig847.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A7S3XVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVK4_HETAK)

HSP 1 Score: 147 bits (371), Expect = 2.730e-42
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 
Query:    1 GGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            GGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG
Sbjct:   48 GGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 121
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A4D9D9A5_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.000e-14
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            +IV GD+ DPA+L  A++GCD+L++ TSA PKIL  SI K+LF K    LL   PGRPEFK+ P G
Sbjct:  101 QIVIGDVMDPATLSKALEGCDSLILCTSATPKILLFSIIKILFKK----LLRRAPGRPEFKFPPRG 162
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A7S0ESZ0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ESZ0_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 6.850e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            +IV GD++D   L  AM GCD++V+ TSAVP+I PLSI K+LF K    L    PGRP+F++ P G
Sbjct:   76 EIVKGDVTDATVLAGAMAGCDSVVLCTSAVPQIKPLSIVKLLFKKTV--LRRAEPGRPQFRFTPGG 139
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A7S0JAA2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JAA2_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 2.330e-10
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            + V GD  D +S+ +AM GCDA+V+ TSAVPKILP SI  +LF K    L    PGRP+FK+  NG
Sbjct:   87 QAVRGDTMDLSSIRSAMAGCDAVVLCTSAVPKILPWSIVTLLFRKTI--LRAKEPGRPKFKFGANG 150
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A0M0K127_9EUKA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K127_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 2.550e-9
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            ++V  D +    +  AM+ CDA+V+ TSAVPKI PLSIAK+LF KA   L +  PGRP+F++E +G
Sbjct:   66 QVVRADTTVLNEVTAAMENCDAVVLCTSAVPKIKPLSIAKLLFKKAI--LRSKDPGRPQFRFESDG 129
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A6H5L426_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L426_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.630e-9
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
             I   D++ P  L  A++G +A+V+ TSAVPKI P SIAKV+F K    L +  PGRP+F W  NG
Sbjct:  119 NIAIADLATPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMI--LRSEDPGRPKFYWCENG 182
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: D8LIZ7_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ7_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.020e-9
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
             I   D++ P  L  A++G +A+V+ TSAVPKI P SIAKV+F K    L +  PGRP+F W  NG
Sbjct:  120 NIAIADLTTPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMI--LRSEDPGRPKFYWCENG 183
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: R1FLD3_EMIHU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLD3_EMIHU)

HSP 1 Score: 59.3 bits (142), Expect = 1.220e-8
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1 
Query:   25 KIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            +IV  D++D A+L  AM GCD++V+ TSAVP+ILP SIAK              PGRP+FK+ P G
Sbjct:   66 EIVRADVTDGAALAAAMAGCDSVVLCTSAVPQILPFSIAK--------------PGRPKFKFAPGG 117
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A0D2J016_9CHLO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2J016_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 2.530e-8
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:   16 GNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWE 213
            G+ K++     D A+  TA+QGCDALVIATSAVP+IL LS+  V+ AK F K       RP+F+W+
Sbjct:   83 GSAKVLDISSGDVAAATTALQGCDALVIATSAVPEILKLSLIPVILAKLFKK----EGVRPQFRWK 144
[Close]
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Match: A0A7S3JVE2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVE2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.570e-8
Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = 1 
Query:   25 KIVFGDIS-DPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNG 222
            KI+  D++    SLE AM GCDA+++ TSAVPKI P SI KV+F K   K      GRPEF +  NG
Sbjct:   71 KIITADVTAKDKSLEAAMSGCDAIILCTSAVPKIKPWSIVKVMFKKLLRKE---DVGRPEFSFPENG 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig847.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A7S3XVK4_HETAK2.730e-42100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D9A5_9STRA5.000e-1456.06NAD(P)-bd_dom domain-containing protein n=2 Tax=Mo... [more]
A0A7S0ESZ0_9EUKA6.850e-1151.52Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S0JAA2_9EUKA2.330e-1053.03Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A0M0K127_9EUKA2.550e-950.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A6H5L426_9PHAE3.630e-948.48NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
D8LIZ7_ECTSI4.020e-948.48NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
R1FLD3_EMIHU1.220e-848.48NAD(P)-bd_dom domain-containing protein n=1 Tax=Em... [more]
A0A0D2J016_9CHLO2.530e-850.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Mo... [more]
A0A7S3JVE2_9STRA2.570e-850.75Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig847contigH-akashiwo_Contig847:281207..287069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIZ7
PFAMsNAD_binding_10
Model size224
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.59e-10
EggNOG OGsCOG0702@1|root,KOG1203@2759|Eukaryota
Descriptiondivinyl chlorophyllide a 8-vinyl-reductase activity
Cds size222
COG categoryGM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388010.0275774-CDS-H-akashiwo_Contig847:281207..2813091681388010.0275774-CDS-H-akashiwo_Contig847:281207..281309Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig847 281208..281309 -
1681388010.0436945-CDS-H-akashiwo_Contig847:286949..2870691681388010.0436945-CDS-H-akashiwo_Contig847:286949..287069Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig847 286950..287069 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig847.1.1prot_H-akashiwo_Contig847.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig847 281208..287069 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig847.1.1

>prot_H-akashiwo_Contig847.1.1 ID=prot_H-akashiwo_Contig847.1.1|Name=mRNA_H-akashiwo_Contig847.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=74bp
GGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVL
FAKAFGKLLNLPPGRPEFKWEPNG
back to top

mRNA from alignment at H-akashiwo_Contig847:281207..287069-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig847.1.1 ID=mRNA_H-akashiwo_Contig847.1.1|Name=mRNA_H-akashiwo_Contig847.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5863bp|location=Sequence derived from alignment at H-akashiwo_Contig847:281207..287069- (Heterosigma akashiwo CCMP452)
GGTGGTTCAATTTCAGGAAACGGAAAGATTGTTTTTGGGGATATTTCTGA
CCCTGCAAGTCTTGAAACAGCTATGCAGGGATGTGATGCCCTTGTGATTG
CCACTTCAGCTGTCCCCAAGGTAAGATAAGATGTTTTCATACTAAAAATA
TTCATGTAAATTTAAGCAATATTTTTTAATATTGATTATGCAGCAATAAA
ATAATACACAATCTAGCTTTTTTAGATGTATTTGAGCTAATAAGGGGCAC
TGACAATGGCTTTTAAGAAACAGAGTAGTTTTTTGTAGTATTCAATTGGT
TTTTCTAGCAGTCTCTGTCAAGACAGGGTTATGATCATTTTTTCTTCTAC
TTTGACATTAATGTCTTTGACATGGAGCAGATCTGGCACTGATCCAGGCT
CTCTCTCAAATCAAAAACTACTACTGTAGGCAGATGTTGTATTCATTTTT
TATTGATTAGAAAAAAGCTATCCTACAACACACCCCAATCTATGGTGACT
ATGCCTGCATTTCGGGACTCCATCCCACGACTGGCTCTACAACAGTCATG
CCTTCATCAGGCCACCTTGATTGCGATGGGTAATGACTACAGATTGGTGG
ATGGTCCAACAGCACAGGCTGAGAACAAATCATGTTAATGGATTCGTTTT
TTCTTGTCATCAAAAATGGAAACTTCCGTGAGGATAGCTCACCATCATGC
GGCTATGATTTTCATGTTTTGTTGAGGAGTACTGTAGTCAGTATCCATCA
CAACCAAGGTGCCCTGATGAAGGCATGGCTGTTGTATAGAGCAAGTCGTG
GGGTGGAGTCCCCAAAATGCAGGCAAAGTCACCATAGATTGGGGTGTTGT
AGGATAGCTTTATCTAATCCATAAAAAAGGAATACATCTGCCTCAGTAGT
TTGTGATTTGAGAGAGCTTGGACCAGTATCAGATCTGCTCCACGTCAAAG
ACATTAATGTCAAAGTAGAAGAAAAAATGAGAGTAGTATTTCACTGTTGC
ACGTATCGATCGCGATCGGTAATAGTGATCATTTTTCTAATTATATACTA
CTACTACCTACAATGAACAAAAAAATATTTTTTTTTTTAATTGGTTTTTT
GTGGCAGTCTCTGACAAGACAGGGTTACAATCCTTTTTCTTCTACTTTGA
TGACATTAATGTCTTGACATGGAGCAATTCTGGCACTGGTGTAGGCTTGC
TCCATGTCAAGACATTAATGTCAAAGTAGAAGAAAAAAGGAAAGAAATAT
TTTTAATGTTATTTTATTACTTTCATTTTTCAGATTGTTTCCTTAAGTTT
GTAGCTGTTCGTTCTCAGTCAAACTGGAGGAATCATTAATGGCAAAAAGA
CAACGGCTATTAGTAGTTTTTCAGCTGCTGGTGGCTCTTTTCTTCTTTCT
TTGTTGCGCAATCCCACTTCTTCTCCCTACCCATCTTCATTTGGTTTAAT
CTTACTGACAAGGCGTGTTGACGAAGGCCAGCCACCGGCCTCAGCTGGTG
GTATGCCAGAAACAGCGCTGTCCACGTCAGATCTTGTAATGATTTAAAAC
CTTTGATATGTCACCTCTTTGGCAATGTAGAGCTATACTCTAGTACATAA
TAAATAAATATATATTATATATAATATAATTCTTATGTTTTTGGGTGGGT
GTATGATGGGTTCGTTGTTTGCCATGTCGGTTGCAGCTCTGCTTGTTGTT
GGTGCACAATTCTGGTATATTATTGTTCGTCGATTATATAATTAATAAAT
AGTATTAGTTTTTTGTGGCAGTCTCTGTCAAGACAGGGGTTATAATCGTT
TTTTTTCTACTTCTTTGACATTAATGTCTTTGACGTGGAGCAATTCTGGC
ACTGGTGTAGGCTTGCTCAAATCTCAAATCACAAACCACTTAAAAGCAGG
TGTATTCATTTTTAATGATTTGAAAAAAGCTATCCTACAACATCCAATCT
ATGCTGACTATGCCTGCATTTCGGGGACTCCACCCCAATGACTCGGGCTC
TGCAACAGCCTTTTGTCTCTTCAGGCCAGCTGTGATTTGATGATGGGAGT
GACTACAGCATCCTCCTCTTCAAAAACATGAAAATCATGGCACTTAAAAA
TGAATACACCTGCTTAAGTGGTTTGTGATTTGAGTAAGCCTACACCAGTG
CCAGAATTGCTCCACGTCAAAGACATTAATGTCAAAGTAGAAAAAAAAAA
AAATAGTAAGTATATAATAAAATAATACATAAATAATAAATAAATATATA
TATATGATGATGATGATGATGATTTTAGTTTATTTCAAGTCCTTTTTATT
TATTATATACAATCAATATAATATTGAAATGAAAGTGATCACTGATGGTA
CGGAACAATTAATTGATCTTCTAGCAAATGATACGCCTCTCCAGCTCCCG
ACGTTTCGACATGAAGTCATGCCTTCTTCATAGAAACACCAAGTTGGCCA
AACTCCAACTAGGTCCCATCAAGGTAAATGATGAAGGTGGTCCGGCCAGC
ACAACAACACCAATAGCCGATGAGACAAAAAATGATAATGGTTACATCTC
TCCTCTCTCCTGTTTCTCCTCCTTCCATCCCTGCTGCCAACAGCACAAAG
AAAAAAAATACATAGAAAAAGAATGGAAATACAAATATACATCACGAGAT
TCGCACCCTCCTCTTCCTTGCCCTCTTCGCCCGGCACTTGCCACCCAACT
TTTCCTCTTCTTGTTCCACTCTGACGGAATAGTCTTCCTCGAACACGTCT
TGTCAGTAAGTAAGATAAACAAAATGAAGATGATTAATAATTAATTTGAT
TAATAATATTAAATTAATATTAATAAGACCATCCATCAGAGCATAGAAAA
TTCCAAAAAGGAAGACGTTGACCCAGTCTAATGCTTCACGGACACCATCA
AAATGACTATGGGTAGTGGTGTAAAGAAGTGGATTGCACAGCAGGAAAAC
AGCAGCAGCAGAAAAACCACCAACCGTCGCCTTTTTGCTTTCATGTATCT
CAGCTTTTTTCTAACTGAAAAGAGCTGCAGGCTTAAAGAAACATTCTGCC
CTCTTTCTTCTCCACGATCACTATACTGATTTTAGCATCATCATCTTCAC
GACCAAATACAAGTGCGGGCCATGAACCACAGAGTAATTCCACGATGTAA
AAATGTGAACGGACGTTCCAAAGCATAGCTCAACTGCCATTAAGTAGATG
ATATATGCGGGTCTGCAGAAACGGAATTGGAACCAGATTGACGGGCCTCT
CCCCAACTCCCTAGATTGAGCCAGCCCAAGGGGGGGGGGTCTGTGTGCAA
AGTTGAGGTCAAGTGAGACAAGGCATCAGTTCACTTCATTATGATCCCAA
GATCACATATTGAACAACCCAACACCTTCCGCTACCTGTTTAGCTGTCCT
CATTAAGGTGTCAAAAGTGCCTTCAGCTCATTTTTTTGCCAAATATGGGC
AATTTTGACCCAAGAACCCCCTCTGGATGCTACACAAATCACTTATAGCA
CCAACCAAAGCATGCAAAGTGTCCCTGCTACATTGTTAAGTACTGTTGAC
CACATTCAGGGGGTTGTTGGGAGGTTTTTATACCCTCCAAGTTGAAAAAG
CAGTGTGCAGTGGTGATTTCCTACTATAGGAATGCCTCCAGAGGGGGGGG
GGAAGGCCTGCTAGGGGTGACTCAGGGAGGCTTACCTGGCCAAATAAAGT
TACAAATGGATGCATTGGACTCTAATGGAGTGAAAAATGGCCCTACTTGA
AGGTTTAAAGGCATAATGCAGGATACATAGCCAAAGGCAGTGCCCCAACC
AAGAGCCCGCCATGGGGAATGGGGGGTGACTGGTGTCTGAAGGCCTCCCA
GGGGCGACCCAGGGGGGCTTGCCTGGCCAAGCAAAGCACTAAATGGATGC
ATTAGGCCTAAATGGAGTGCATTATGGCCCAACTTCCGGGTTTTGGGGCA
TAGTACAGGGTTTACTGGCAAACACAGGTCCCCAGCCGGGGCCCCGCTAT
AGAGAATGGGGGGTGGCGGGGCTCTTAGGGCCTCCCAGGGGTGACTCAGG
GGCGTTTGCCTGGCAAAGTTAAGCTCCAAATGGATGTATTGGACCTAAAA
TGAGTGCATCATATCCAGAAATGAAGGCTCAGCGGCACAGTACAGGATGT
AGAGGCAAAGGCGGTGCCCCAGCCGGGGTCCCGCCATGGCGAAGGGGAGT
GGCGGAGGTATGAGGGCCTGCAAGGCGTGAATCAAAAGGTCTTTCTTGGC
CAAGTAAAGCTCAAAATGGATCCCTTTAGGTCTAATGCAGCCATTTGGTG
CTTTGCTTGGCCAGGCAAGCCCCCCTGAGTCGCCCCTGGGGGCCCTTCAT
ACCCCAAACAGGCCCCCCTTCCCCATGGCGGGACCCCGCCGGAGCCCCGC
CGGAGTGTTGGGTTTTTGAACTATGGCCCTAAAACCGCAAGTAGGGCCAT
TTTTCACTCCATTTAGGTTTTGAACTATGGCCCTAAAACCGCAAGTAGGG
CCATTTTTCACTCCATTTAGGTCCAATGCATCCATTTAGTGCTTTACTTG
GCCAGGCAAGCCCCCCTGAGTCGCCCCAGTGAGGCCTTCATACCCCACCA
GACACCATTTCCCATGGCGGGACCCCCCGCCGAGCCCCCGCCGAGTGTTG
GGTTTTTGAACTATGGCCCTAAAACCGCAAGTAGGGCCATTTTTCACTCC
ATTTAGGTCCAATGCATCCATTTAGTGCTTTACTTGGCCAGACAAGCCCC
CCTGAGTCGCCCCAGGGAGGCCTTCATACCCCCACCAGACCCCATTTCCA
ATGGCAGTCTATGGGAAGTACGGCAGATTTCGCGTGCCCAGACTTGAACC
CAAAGCTGACCTTACGCGCTTTTGCCATACGGCTAGTTAGTGGTTGGGGT
TGAAAGCTCAAATTTCTCGGAAAATTCGTCTGCGCATTTTGAGCTTTACA
CCTCTTCGTCGTCTCAATCATATTATAAATATCCTAATATCTCGCCAAAT
ATCCCAAAATGTTGCCAAATATCCTAATATCTTGGCAAATATCCCAATAT
CGCTCAAGATTTAAAAAATAGCCCAAAATCGAAAAAAAAAAAAAATGCTA
AAAGTTGAGCAACATTGCACGTGCGTTGTTGGCAAAAGCCTACCGAAGGC
AGCAATTGACCACACCGGCCCTCACAAACTAGCCGAAGAAATAGACGAAA
TCCTTCTCGGGCTGCTGGAAGAGCAACCTGTACCACGAGAAGAGTAAAAC
CAGCAAGAATAAGGGTCCCATCCCGCTTGCTTGGCAAATCCCTGTTGTGG
GCAGGAGAGTGCCCACCACGCACCAATTGCTGCTCGTTGGTACCGTGCGG
GAGGTTTGTTACCCACCATTATAAACAACGGTGGCTGATACCTTTGTTCG
GCACCAGCGTCCGAAAGCGCACTTTGATCGCCACACTTTTTTTGCTGCAG
TGAAAGTTGCTCTGGATAACAACTTGATGTATTCTTGCAACCCATTCACT
GTTCGCCTTGCACTCACTGGAATACACCACTTACAGGTTCTGCCTTTTTT
GCACTACAGGACAAAACTCCTTCTTTTTCAACCATAAATCATGTACATCC
AATTATTATTCATTTGTTCGGGGTGCTGTTGTGTGTTATCTCTTCCGGCC
TTTCTGAGAAGCCTGCTGGTTGCATTTCCCCCTCCGCCCGCACACCAACT
TGATCACCCACACAAATGAACCCTTTCTTCTTCTTTCTTTGGTCGGGCGG
ACGGGGGCAGATCCTTCCCTTGAGCATCGCGAAGGTGCTGTTCGCCAAGG
CCTTCGGGAAGCTCCTGAACCTGCCGCCCGGGCGGCCGGAGTTCAAGTGG
GAGCCCAACGGGC
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig847:281207..287069-

>mRNA_H-akashiwo_Contig847.1.1 ID=mRNA_H-akashiwo_Contig847.1.1|Name=mRNA_H-akashiwo_Contig847.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=222bp|location=Sequence derived from alignment at H-akashiwo_Contig847:281207..287069- (Heterosigma akashiwo CCMP452)
GGTGGTTCAATTTCAGGAAACGGAAAGATTGTTTTTGGGGATATTTCTGA
CCCTGCAAGTCTTGAAACAGCTATGCAGGGATGTGATGCCCTTGTGATTG
CCACTTCAGCTGTCCCCAAGATCCTTCCCTTGAGCATCGCGAAGGTGCTG
TTCGCCAAGGCCTTCGGGAAGCTCCTGAACCTGCCGCCCGGGCGGCCGGA
GTTCAAGTGGGAGCCCAACGGG
back to top