mRNA_H-akashiwo_Contig846.5.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 140 bits (353), Expect = 2.260e-34 Identity = 82/232 (35.34%), Postives = 120/232 (51.72%), Query Frame = 1 Query: 28 LMDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 L+++ D+ GPF + S+ GNRY L I + +S CWIY LK KS+A + + Q G Y R+DRGGE+ + + F GII + TP+ N ERK + MA + + L + +W + AVY+ +R P K ++T E W +KP V H + FGC+ Y + RK+++ + K I +GY E KAY L + TKK I+SRDV F Sbjct: 389 LLEIVHTDIAGPFDIPSLGGNRYYLTFI--DDFSRKCWIYILKEKSEAL-EKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPT-KSVKYMTPNEA-WSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAY--RLYNPLTKKIIISRDVEF 613
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: UPI0016589FE9 (uncharacterized protein LOC118514016 isoform X1 n=1 Tax=Anopheles stephensi TaxID=30069 RepID=UPI0016589FE9) HSP 1 Score: 139 bits (350), Expect = 5.770e-34 Identity = 84/241 (34.85%), Postives = 136/241 (56.43%), Query Frame = 1 Query: 4 IKEDRQVCLMDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLP-AHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 + E ++D+ +D+ GP ++ G RY + LI+ +S Y ++Y LK KS+ N + +L+ NQ G P R+D+GGE+++ L+ F +++GI E A +P+ N ERK L M L + + K +W + A Y+ +RLP A D+ T FE+ W KKPD++++R FGCVGY + S RK+++ KA + VGY+ + KAY ++ T +T + +SRDV F Sbjct: 460 VAEKTSTEVLDIIHSDVCGPMEETTLGGCRYYMT--LIDDHSRYTFVYFLKKKSEVE-NKIREYVKLVQNQFGRKPRIIRSDQGGEYFSKALRKFCADEGIKMEFTAAYSPQQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVDR---TPFEI-WFGKKPDLTNLRLFGCVGYVLIPSVKRKKLDVKAERMTFVGYSGEHKAYRMLNT--KTGEIQISRDVRF 691
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY) HSP 1 Score: 139 bits (350), Expect = 6.020e-34 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 1 Query: 31 MDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 +++ D+ GPF + S+ GNRY L I + +S CWIY LK KS+A + + Q G Y R+DRGGE+ + + F GII + TP+ N ERK + MA + + L + +W + AVY+ +R P K ++T E W +KP V H++ FGC+ Y + RK+++ + K I +GY E KAY L + TKK I+SRDV F Sbjct: 1311 LEIVHTDIAGPFDIPSLGGNRYYLTFI--DDFSRKCWIYILKEKSEAL-EKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPT-KSVKYMTPNEA-WSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAY--RLYNPLTKKIIISRDVEF 1534
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY) HSP 1 Score: 137 bits (346), Expect = 2.030e-33 Identity = 81/225 (36.00%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 49 DLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 D+ GPF + S+ GNRY L I + +S CWIY LK KS+A + + Q G Y R+DRGGE+ + + F GII + TP+ N ERK + MA + + L + +W + AVY+ +R P K ++T E W +KP V H++ FGC+ Y + RK+++ + K I +GY E KAY L + TKK I+SRDV F Sbjct: 291 DIAGPFDIPSLGGNRYYLTFI--DDFSRKCWIYILKEKSEAL-EKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPT-KSVKYMTPNEA-WSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAY--RLYNPLTKKIIISRDVEF 508
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: Q8WSJ0_ANOGA (Polyprotein (Fragment) n=1 Tax=Anopheles gambiae TaxID=7165 RepID=Q8WSJ0_ANOGA) HSP 1 Score: 135 bits (341), Expect = 7.810e-33 Identity = 81/232 (34.91%), Postives = 132/232 (56.90%), Query Frame = 1 Query: 28 LMDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 ++D+ +D+ GP ++ G RY + LI+ +S Y ++Y LK KS+A + + +L+ NQ G P R+D+GGE+ N L+ F +++GI E A +P+ N ERK L M L + + K +W + A Y+ +RLP+ + T FE+ W +KPD++++R F CVGY + S RK+++ KA + VGY+ + KAY ++ T QT + +SRDV F Sbjct: 338 VLDIIHSDVCGPMEETTLGGCRYYMT--LIDDHSRYTFVYFLKKKSEAE-DKIHEYVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADEGIKMEFTAAYSPQQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVER--TPFEI-WFGRKPDLTNLRLFXCVGYVLIPSVKRKKLDVKAERMTFVGYSGEHKAYRMLNT--QTGEIRISRDVRF 561
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A182GNT8_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GNT8_AEDAL) HSP 1 Score: 133 bits (334), Expect = 6.240e-32 Identity = 77/232 (33.19%), Postives = 125/232 (53.88%), Query Frame = 1 Query: 28 LMDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 ++DL DL GP + +GNR+++ +I + +S Y +Y L KS+A + +M + G P R+D GGE+ N+ LQSF +GI AE A TP+ N ER+ +L+ MA A L + L K YW + + A ++ +RLP+ T FE W +KP++++++ FGC + + + R + + KA K +GY+E K Y + +T+K +SRD F Sbjct: 471 VLDLVHTDLCGPMRTPTPSGNRFLMTVI--DDHSRYAVVYLLAKKSEAP-DKLMEYVRYVETLFGRKPKVVRSDSGGEYCNERLQSFFVREGIKAEYTTAYTPQQNGVAERRNRYLQEMATAMLIDAKLEKKYWGEAVMAAAHLQNRLPSRSVS--CTPFEK-WFGRKPNLNYLKVFGCKAWVHVPDSKRGKFDSKARKMTFIGYSEQHKGYRFV--DLETEKVTISRDAKF 694
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A182G7X1_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G7X1_AEDAL) HSP 1 Score: 133 bits (334), Expect = 7.460e-32 Identity = 77/232 (33.19%), Postives = 125/232 (53.88%), Query Frame = 1 Query: 28 LMDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 ++DL DL GP + +GNR+++ +I + +S Y +Y L KS+A + +M + G P R+D GGE+ N+ LQSF +GI AE A TP+ N ER+ +L+ MA A L + L K YW + + A ++ +RLP+ T FE W +KP++++++ FGC + + + R + + KA K +GY+E K Y + +T+K +SRD F Sbjct: 108 VLDLVHTDLCGPMRTPTPSGNRFLMTVI--DDHSRYAVVYLLAKKSEAP-DKLMEYVRYVETLFGRKPKVVRSDSGGEYCNERLQSFFVREGIKAEYTTAYTPQQNGVAERRNRYLQEMATAMLIDAKLEKKYWGEAVMAAAHLQNRLPSRSVS--CTPFEK-WFGRKPNLNYLKVFGCKAWVHVPDSKRGKFDSKARKMTFIGYSEQHKGYRFV--DLETEKVTISRDAKF 331
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA) HSP 1 Score: 133 bits (334), Expect = 7.920e-32 Identity = 77/231 (33.33%), Postives = 118/231 (51.08%), Query Frame = 1 Query: 31 MDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 +++ D++GP+ + S+ GNRY L I + YS CW+Y LK KS+A ++ Q G Y R+DRGGE+ +SF + GII + TP+ N ERK + MA + + L + +W + AVY+ ++ P + E W KP V H++ FGC+ Y + RK+++ + K I +GY + KAY L + TKK I+SRDV F Sbjct: 544 LEIVHTDISGPYDIESLGGNRYYLTFI--DDYSRKCWVYFLKAKSEAL-EKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTP--EEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAY--RLYNPLTKKLIISRDVEF 767
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A6V7M0T8_9HYME (Uncharacterized protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7M0T8_9HYME) HSP 1 Score: 132 bits (333), Expect = 1.060e-31 Identity = 81/232 (34.91%), Postives = 122/232 (52.59%), Query Frame = 1 Query: 31 MDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAH-KDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 ++L DL GP ++V G RY++ II + +S Y ++Y L KSQ + + Q G P FR+DRGGEF + +L FL+ +G+ + TPE N ERK L L + L YW + + A YV + LP +DK T FEL + +KKPD+SH+R +GC Y + R +++ K + I VGY+++ KAY ++ T K + SRD+ F Sbjct: 374 LELLHMDLCGPMPTKTVGGRRYLMTII--DDFSRYTFVYLLTEKSQ-DERVIRDFIAEMKTQYGEKPKCFRSDRGGEFMSHDLMQFLAKQGVKVQRTAPYTPEQNGVAERKNRTLVEATRTMLIDAGLADQYWGEAVMTAGYVQNLLPTRVRDK---TPFELFF-DKKPDISHLRVYGCKAYAHIPKQMRLKLDNKTRECIFVGYSQESKAYRLL--EENTGKILTSRDIKF 596
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Match: A0A438JVJ0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JVJ0_VITVI) HSP 1 Score: 132 bits (331), Expect = 1.970e-31 Identity = 80/237 (33.76%), Postives = 127/237 (53.59%), Query Frame = 1 Query: 13 DRQVCLMDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANNVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSSRLPAHKDKGFLTRFELLWKNKKPDVSHMRPFGCVGYCALSSANRKEMNPKAVKAIMVGYAEDRKAYLIMLTSSQTKKFIVSRDVTF 723 +R L+DL +DL + + GNRY L I + S + +++ LKNKS+ T N + NQLG R+DRGGE+++ E SF GII E TP++N ERK M NA L + L W + + A Y+ +R+P K++ ++ ++L WK +KP++ + + +GC+ YC + N+ ++ P+A+K VGYA + KAY ++ S I SR+V F Sbjct: 491 ERSSNLLDLIHSDLCELNGMLTRGGNRYFLTFI--DDCSRFTYVFLLKNKSE-TFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALLTACYILNRIPMKKNE--ISPYDL-WKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGYASNSKAYRLLDLESNV--IIESREVEF 719 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig846.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig846.5.1 >prot_H-akashiwo_Contig846.5.1 ID=prot_H-akashiwo_Contig846.5.1|Name=mRNA_H-akashiwo_Contig846.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=231bp MDLTSADLTGPFYVRSVTGNRYVLIIILIEHYSDYCWIYPLKNKSQATANback to top mRNA from alignment at H-akashiwo_Contig846:183706..184428+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig846.5.1 ID=mRNA_H-akashiwo_Contig846.5.1|Name=mRNA_H-akashiwo_Contig846.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=723bp|location=Sequence derived from alignment at H-akashiwo_Contig846:183706..184428+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig846:183706..184428+ >mRNA_H-akashiwo_Contig846.5.1 ID=mRNA_H-akashiwo_Contig846.5.1|Name=mRNA_H-akashiwo_Contig846.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=693bp|location=Sequence derived from alignment at H-akashiwo_Contig846:183706..184428+ (Heterosigma akashiwo CCMP452)back to top |