mRNA_H-akashiwo_Contig846.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A7S3XT50_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT50_HETAK) HSP 1 Score: 183 bits (465), Expect = 4.810e-56 Identity = 83/122 (68.03%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 1 KTRHRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTA 366 +T+HRIIL D+P+ PP RMS EQ D AR+TIQEMI++GV+R SKSPYASCTV+VRKPDG WRCCIDFRRLNA + DV PLPR +D+L+ LS K FT VDM+KGYWQVP+ ++D+EKTA Sbjct: 50 RTKHRIILQHDRPLHQPPRRMSPEQLDVARETIQEMIDLGVVRKSKSPYASCTVIVRKPDGAWRCCIDFRRLNAITKRDVHPLPRTEDILRYLSQAKYFTSVDMYKGYWQVPMEKEDIEKTA 171
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A7S3XLC6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC6_HETAK) HSP 1 Score: 154 bits (390), Expect = 3.810e-45 Identity = 71/77 (92.21%), Postives = 72/77 (93.51%), Query Frame = 1 Query: 196 CIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNA 426 CIDFRRLNA + DVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTP LYEWLFMPMGLTNA Sbjct: 1 CIDFRRLNAVTKRDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPFGLYEWLFMPMGLTNA 77
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A6G5AC45_RHIMP (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5AC45_RHIMP) HSP 1 Score: 145 bits (365), Expect = 7.160e-37 Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 1 KTRHRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNA 426 + RHRI T +PI P R+S +R + ++EM++ G+I+ S SP+A+ +LV+K DGTWR C+D+RRLN+ + DV PLPR+DD L L F+ +D+ GYWQ+P+H D EKTAF TP LYE+ MP GL NA Sbjct: 270 RIRHRINTQTAQPIRQKPYRVSPSERKIIDNQVREMLQKGIIQESSSPWAAPVILVKKKDGTWRFCVDYRRLNSITKKDVYPLPRIDDALDCLHSASYFSSIDLRSGYWQIPMHPADKEKTAFITPDGLYEFNVMPFGLCNA 411
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A7J7K478_BUGNE (Uncharacterized protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K478_BUGNE) HSP 1 Score: 143 bits (361), Expect = 1.630e-36 Identity = 67/143 (46.85%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 10 HRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNATSYL 438 H ++L T +P+ S P + R+ ++ I +M+++GVIRPS SPYAS TV+V+KPDG+ R CID+R+LN D P+ + DDL QKLS +K FT +D+ KGYWQ+P+ ++D+ KTAF TP YE++ MP G+ N+ + L Sbjct: 384 HSVLLTTAEPVKSKPYGLPYRVRETLKEDINDMLKMGVIRPSTSPYASPTVIVKKPDGSNRICIDYRKLNKISVFDPEPMIKADDLFQKLSGDKYFTKLDLSKGYWQIPVKKEDIHKTAFVTPDGHYEFIKMPFGMVNSGATL 526
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A7J7JPA8_BUGNE (Uncharacterized protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JPA8_BUGNE) HSP 1 Score: 142 bits (357), Expect = 5.250e-36 Identity = 67/143 (46.85%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 10 HRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNATSYL 438 H I L TD+P+ S P + R+ + I++M+++GVIRPS SPYAS TV+V+KPDG+ R CID+R+LN D P+ + DD+ +KLS +K FT +D+ KGYWQ+P+ ++D+ KTAF TP YE++ MP G+ N+ + L Sbjct: 446 HSIELTTDEPVKSKPYGLPYRVRETLKADIEDMLKMGVIRPSTSPYASPTVIVKKPDGSNRICIDYRKLNRVSVFDPEPMVKTDDVFRKLSKDKYFTKLDLSKGYWQIPVKKEDIPKTAFVTPDGHYEFIKMPFGMVNSGATL 588
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: L7LV55_RHIPC (RNA-directed DNA polymerase n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LV55_RHIPC) HSP 1 Score: 142 bits (359), Expect = 5.370e-36 Identity = 68/142 (47.89%), Postives = 93/142 (65.49%), Query Frame = 1 Query: 1 KTRHRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNA 426 + RHRI + PI P R+S +R + ++EM+ GVI+ S SP+A+ +LV+K DG+WR C+D+RRLN+ + DV PLPR+DD L L F+ VD+ GYWQ+P+H DD EKTAF TP L+E+ MP GL NA Sbjct: 76 RIRHRINTGSAHPIRQKPYRVSPTERKVISEQVEEMLRKGVIQESASPWAAPVILVKKKDGSWRFCVDYRRLNSITKKDVYPLPRIDDALDCLHSASYFSSVDLRSGYWQIPMHTDDKEKTAFVTPDGLFEFNVMPFGLCNA 217
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: L7ML08_RHIPC (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7ML08_RHIPC) HSP 1 Score: 142 bits (358), Expect = 7.430e-36 Identity = 68/142 (47.89%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 1 KTRHRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNA 426 + +HRI T PI P +S +R D +QEM++ GVI S SP+A+ +LV+K DG+WR C+D+RRLNA + DV PLPR+DD++ L F+ VD+ GYWQ+P+H D EKTAF TP LY++ MP GL NA Sbjct: 144 RAQHRIDTSTAHPIRQKPYLVSSSERKVIADQVQEMLQKGVIEESCSPWAAPVILVKKKDGSWRFCVDYRRLNALTKKDVYPLPRIDDVIDCLHSASYFSSVDLRSGYWQIPMHPADKEKTAFVTPDGLYQFNVMPFGLCNA 285
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A8J9ZJW5_BRALA (RTL1 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZJW5_BRALA) HSP 1 Score: 142 bits (358), Expect = 7.560e-36 Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 1 Query: 10 HRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNATS 432 HRI+ H D+PI P RM ++ + + + EM++ GV+ PS+SP+A+ VLVRK +GT R C+D+R+LN D PLPR DD + LS FT +DM GYWQVP+H DD EKTAF T LY++ M GLTNA S Sbjct: 122 HRILTHDDRPIKQRPHRMPIHRQAEVQRQVAEMLDAGVVEPSQSPWAAPVVLVRKKNGTHRFCVDYRKLNHATVKDAHPLPRTDDTIDALSGSAYFTTLDMTTGYWQVPVHPDDREKTAFTTGRGLYQFTVMAFGLTNAPS 262
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A6G5A909_RHIMP (Putative tick transposon n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5A909_RHIMP) HSP 1 Score: 134 bits (338), Expect = 1.460e-35 Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 10 HRIILHTDKPIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNA 426 H I PI P R+S +R D + +M++ GVI+ S SP+A+ +LV+K D +WR C+D+RRLNA + DV PLPR+DD + L F+ VD+ GYWQ+P+H D EKTAF TP L+E+ MP GL NA Sbjct: 9 HHINTGDATPIRQKPYRVSPSERQVIADQVNDMLQKGVIQKSSSPWAAPVILVKKKDNSWRFCVDYRRLNAVTKKDVYPLPRIDDAVDCLHSAAYFSSVDLRSGYWQIPMHPSDKEKTAFVTPDGLFEFNVMPFGLCNA 147
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Match: A0A6A3VJX0_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VJX0_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.470e-35 Identity = 70/164 (42.68%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 37 PIASPPARMSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRRLNA*RQGDVTPLPRVDDLLQKLSPEKVFTGVDMWKGYWQVPLHEDDVEKTAFNTPVRLYEWLFMPMGLTNATS----YLSGHDAGDPPRTPIQEGGRLSGRRIYL 516 PI P R+S + D IQ+ +E+G++RPS SP+AS +++RKPDG R CID+RRLNA D P+P +DD+L L K+F+ +D+ GYW VP+H VEKTAF L+EWL MP GL NA + H RT G L G R+ + Sbjct: 175 PIKQRPYRVSNAEGDVMEAEIQQYLELGIVRPSTSPWASPVLMIRKPDGGIRFCIDYRRLNAVTIKDCYPMPLIDDILDVLRGAKLFSTMDIASGYWNVPMHAGSVEKTAFTCKYGLFEWLVMPFGLCNAVPAFERLMENHRLPYSSRTTTTSAGTLQGCRLQV 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig846.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig846.1.1 >prot_H-akashiwo_Contig846.1.1 ID=prot_H-akashiwo_Contig846.1.1|Name=mRNA_H-akashiwo_Contig846.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=55bp MSEEQRDQARDTIQEMIEIGVIRPSKSPYASCTVLVRKPDGTWRCCIDFRback to top mRNA from alignment at H-akashiwo_Contig846:93331..93889- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig846.1.1 ID=mRNA_H-akashiwo_Contig846.1.1|Name=mRNA_H-akashiwo_Contig846.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=559bp|location=Sequence derived from alignment at H-akashiwo_Contig846:93331..93889- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig846:93331..93889- >mRNA_H-akashiwo_Contig846.1.1 ID=mRNA_H-akashiwo_Contig846.1.1|Name=mRNA_H-akashiwo_Contig846.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=165bp|location=Sequence derived from alignment at H-akashiwo_Contig846:93331..93889- (Heterosigma akashiwo CCMP452)back to top |