mRNA_H-akashiwo_Contig845.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig845.6.1
Unique NamemRNA_H-akashiwo_Contig845.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A7S3Y454_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y454_HETAK)

HSP 1 Score: 933 bits (2412), Expect = 0.000e+0
Identity = 465/493 (94.32%), Postives = 478/493 (96.96%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDVNTYQSLVGAFQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWELVRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKF 1479
            VYVPRS RAALECPDSLRWKAALNAILDQLESSQF HFVPRTPDMQVIPSHF+FAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHI AVEDLELLSLDV+NAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLR+WGFVPLDTAET+Y+RGSLSAG FQMLAI VDDIQVASQSVALQKKFVNQLGSVFKHK  PASRFVG+D+ERDRAAKTIKVTAASK+A VLEAHGL EVHPKYTPCAPGVHLSSDSSGQR+DVNTYQSLVGAFQFI+EFRPDISFAVGKL KFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFV GSLIVHKSKLQHITTLS+AEAELVALVLAICEAK VCSMLWEL+RVRG +RAYTDCMAVVHMANHQKHLQR RHLNIK HFLKDEVSEDRLSVEHIPGKF
Sbjct:  261 VYVPRSYRAALECPDSLRWKAALNAILDQLESSQFAHFVPRTPDMQVIPSHFVFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHICAVEDLELLSLDVNNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRRWGFVPLDTAETIYVRGSLSAGDFQMLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASRFVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 753          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A7S4DC66_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC66_HETAK)

HSP 1 Score: 933 bits (2412), Expect = 0.000e+0
Identity = 465/493 (94.32%), Postives = 478/493 (96.96%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDVNTYQSLVGAFQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWELVRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKF 1479
            VYVPRS RAALECPDSLRWKAALNAILDQLESSQF HFVPRTPDMQVIPSHF+FAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHI AVEDLELLSLDV+NAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLR+WGFVPLDTAET+Y+RGSLSAG FQMLAI VDDIQVASQSVALQKKFVNQLGSVFKHK  PASRFVG+D+ERDRAAKTIKVTAASK+A VLEAHGL EVHPKYTPCAPGVHLSSDSSGQR+DVNTYQSLVGAFQFI+EFRPDISFAVGKL KFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFV GSLIVHKSKLQHITTLS+AEAELVALVLAICEAK VCSMLWEL+RVRG +RAYTDCMAVVHMANHQKHLQR RHLNIK HFLKDEVSEDRLSVEHIPGKF
Sbjct:   85 VYVPRSYRAALECPDSLRWKAALNAILDQLESSQFAHFVPRTPDMQVIPSHFVFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHICAVEDLELLSLDVNNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRRWGFVPLDTAETIYVRGSLSAGDFQMLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASRFVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 577          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A6V1VJZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VJZ2_HETAK)

HSP 1 Score: 836 bits (2160), Expect = 9.370e-300
Identity = 398/504 (78.97%), Postives = 456/504 (90.48%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDVNTYQSLVGAFQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWELVRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPLN 1512
            VYVP+S R+ALECPDSL+W+AALNAILDQLESSQF HFVPRTP M VIPSHF+FAYKEPAEEGGEG+YKVRLVLDGSKQVRG+S++DSWAPSLPHAGWRLFLHI AVEDLEL SLD SNAF+QVPMSSQGA+SP+VY+KVPPGMD PPGMVLELDRALEGSRQAGNLW+K+LR  LR+WGFVPLDTAET+Y++GSL+ G FQMLAIHVDD+QVASQSVALQ++F++QLG+ FK+KL P SRFVG+DLERDR AKTIKVTAASKIAH+L+ HGL +VH K+TPCAPGVH+S+DSS ++ D+  YQ+LVGAF F++EFRPDI+F+VGKL +FL  PN DHMDAALYLAGYLRRT  KGMVFGG+RDY +R++SDSDHGNCPD+GRSTSG+ VF   SLI+HKSKLQHITTL + EAELVALVL+ICEA+ V +MLW+LV  R  M+AYTDCMAVVHMANHQK LQR RHLNIK HFL DEVSE+RLSVEHIPGK+NFTDVFTKP N
Sbjct:  217 VYVPKSYRSALECPDSLQWRAALNAILDQLESSQFAHFVPRTPGMHVIPSHFVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAGWRLFLHICAVEDLELQSLDFSNAFIQVPMSSQGARSPKVYVKVPPGMDVPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIHVDDVQVASQSVALQQQFLDQLGAEFKYKLSPTSRFVGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSVGKLSRFLACPNADHMDAALYLAGYLRRTPGKGMVFGGSRDYRIRIISDSDHGNCPDSGRSTSGIAVFAGDSLIIHKSKLQHITTLGAPEAELVALVLSICEARWVRAMLWQLVGARDRMQAYTDCMAVVHMANHQKGLQRTRHLNIKRHFLHDEVSEERLSVEHIPGKYNFTDVFTKPQN 720          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A7S3Y431_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y431_HETAK)

HSP 1 Score: 661 bits (1706), Expect = 2.590e-236
Identity = 333/362 (91.99%), Postives = 347/362 (95.86%), Query Frame = 1
Query:  394 KSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDVNTYQSLVGAFQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWELVRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKF 1479
            ++P+ YIKV  GMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLR+WGFVPLDTAET+Y+RGSLSAG FQMLAI VDDIQVASQSVALQKKFVNQLGSVFKHK  PASRFVG+D+ERDRAAKTIKVTAASK+A VLEAHGL EVHPKYTPCAPGVHLSSDSSGQR+DVNTYQSLVGAFQFI+EFRPDISFAVGKL KFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFV GSLIVHKSKLQHITTLS+AEAELVALVLAICEAK VCSMLWEL+RVRG +RAYTDCMAVVHMANHQKHLQR RHLNIK HFLKDEVSEDRLSVEHIPGKF
Sbjct:   20 RAPKFYIKVS-GMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRRWGFVPLDTAETIYVRGSLSAGDFQMLAIQVDDIQVASQSVALQKKFVNQLGSVFKHKFSPASRFVGYDIERDRAAKTIKVTAASKVAQVLEAHGLGEVHPKYTPCAPGVHLSSDSSGQRVDVNTYQSLVGAFQFIREFRPDISFAVGKLSKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVGGSLIVHKSKLQHITTLSAAEAELVALVLAICEAKWVCSMLWELLRVRGLVRAYTDCMAVVHMANHQKHLQRTRHLNIKRHFLKDEVSEDRLSVEHIPGKF 380          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A6V1TGB8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TGB8_HETAK)

HSP 1 Score: 661 bits (1705), Expect = 2.500e-233
Identity = 326/505 (64.55%), Postives = 398/505 (78.81%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDVNTYQSLVGAFQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFGG--ARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWELVRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 1509
            VY+P+  R AL+CPDS +W  A+N IL QLE ++F HFV RTP M VIPS ++FAYK+P E+GGEG YKVRLVLDGSKQ  GV Y+DSWAPSLP AGWRLFLHI AVEDLEL S+DV NA++QVPMS+ G  S +++I+ P GM+ P G+VLELDRALEGS+QAG+LW+KYLR  L ++GF PL+TAET+Y+RG+L+ GTFQMLAIHVDDIQ+ASQS AL+++FV ++ + F+ K     +FVG DL RDR A+TIKVT  +KIA +LE HGL+  H K+TPCAPGV +S DS+ ++ D++ YQ LVG  QFI+EFR D +FAVG+L ++L  PN DH +AA YLAGYLRRTA  GMVFGG     Y +R+V+DSDHG CPDT RSTSG+ V++  SLI+HKSKLQH+ TLSSAEAELVAL+LA+CEAK V  ML  L R R  M AYTD MAVV MAN Q+HLQR RHLNIK HFLKDEV+E RLSV H+ GK N  D+FTKPL
Sbjct:   42 VYIPKGYRDALDCPDSPQWVTAINKILTQLEDNKFAHFVKRTPGMNVIPSRYVFAYKDPVEKGGEGTYKVRLVLDGSKQEYGVDYMDSWAPSLPSAGWRLFLHICAVEDLELASVDVKNAYIQVPMSTGG--SYKIHIRAPQGMEVPQGLVLELDRALEGSKQAGHLWYKYLRGVLEEFGFAPLNTAETIYVRGNLAEGTFQMLAIHVDDIQIASQSKALEEQFVKEIQTKFQIKRGSDGKFVGLDLSRDREARTIKVTCETKIAQLLERHGLENAHKKFTPCAPGVQMSRDSTSEKADIDEYQKLVGGLQFIREFRADTAFAVGRLSRYLSCPNKDHQEAAEYLAGYLRRTADMGMVFGGRGGNPYEIRIVTDSDHGMCPDTARSTSGVSVYIGHSLIIHKSKLQHLVTLSSAEAELVALILAVCEAKWVRGMLTALTRRRPHMTAYTDSMAVVQMANQQQHLQRTRHLNIKRHFLKDEVAEGRLSVRHVRGKENTADIFTKPL 544          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A7S4DE91_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DE91_HETAK)

HSP 1 Score: 554 bits (1428), Expect = 3.100e-190
Identity = 258/324 (79.63%), Postives = 300/324 (92.59%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDVNTYQSLVGAFQFIQEFRPDISFAV 972
            VYVP+S R+ALECPDSL+W+AALNAILDQLESSQF HFVPRTP M VIPSHF+FAYKEPAEEGGEG+YKVRLVLDGSKQVRG+S++DSWAPSLPHAGWRLFLHI AVEDLEL SLD SNAF+QVPMSSQGA+SP+VY+KVPPGMD PPGMVLELDRALEGSRQAGNLW+K+LR  LR+WGFVPLDTAET+Y++GSL+ G FQMLAIHVDD+QVASQSVALQ++F++QLG+ FK+KL P SRFVG+DLERDR AKTIKVTAASKIAH+L+ HGL +VH K+TPCAPGVH+S+DSS ++ D+  YQ+LVGAF F++EFRPDI+F+V
Sbjct:  217 VYVPKSYRSALECPDSLQWRAALNAILDQLESSQFAHFVPRTPGMHVIPSHFVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAGWRLFLHICAVEDLELQSLDFSNAFIQVPMSSQGARSPKVYVKVPPGMDVPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVKGSLAGGDFQMLAIHVDDVQVASQSVALQQQFLDQLGAEFKYKLSPTSRFVGYDLERDRVAKTIKVTAASKIAHILDQHGLQDVHMKFTPCAPGVHMSADSSSEKADLQLYQALVGAFMFVKEFRPDINFSV 540          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A7S3Y8J3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J3_HETAK)

HSP 1 Score: 390 bits (1002), Expect = 2.540e-128
Identity = 181/214 (84.58%), Postives = 202/214 (94.39%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVA 642
            VYVP+S R+ALECPDSL+W+AALNAILDQLESSQF HFVPRTP M VIPSHF+FAYKEPAEEGGEG+YKVRLVLDGSKQVRG+S++DSWAPSLPHAGWRLFLHI AVEDLEL SLD SNAF+QVPMSSQGA+SP+VY+KVPPGMD PPGMVLELDRALEGSRQAGNLW+K+LR  LR+WGFVPLDTAET+Y+RGSL+ G FQMLAIHVDD+QV+
Sbjct:  217 VYVPKSYRSALECPDSLQWRAALNAILDQLESSQFAHFVPRTPGMHVIPSHFVFAYKEPAEEGGEGKYKVRLVLDGSKQVRGISFVDSWAPSLPHAGWRLFLHICAVEDLELQSLDFSNAFIQVPMSSQGARSPKVYVKVPPGMDVPPGMVLELDRALEGSRQAGNLWYKFLRRVLRRWGFVPLDTAETIYVRGSLADGDFQMLAIHVDDVQVS 430          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A7S3Y451_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y451_HETAK)

HSP 1 Score: 258 bits (658), Expect = 3.890e-80
Identity = 124/130 (95.38%), Postives = 127/130 (97.69%), Query Frame = 1
Query:    1 VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQG 390
            VYVPRS RAALECPDSLRWKAALNAILDQLESSQF HFVPRTPDMQVIPSHF+FAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHI AVEDLELLSLDV+NAFVQVP+SSQG
Sbjct:   85 VYVPRSYRAALECPDSLRWKAALNAILDQLESSQFAHFVPRTPDMQVIPSHFVFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHICAVEDLELLSLDVNNAFVQVPISSQG 214          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A060T044_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=3 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060T044_PYCCI)

HSP 1 Score: 226 bits (576), Expect = 6.560e-63
Identity = 162/497 (32.60%), Postives = 254/497 (51.11%), Query Frame = 1
Query:   52 RWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAP-PGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHK-LCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSD------SSGQRMDVNTYQSLVGA-FQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFG-GARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWEL-VRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 1509
            RW  A    +  L  +Q    V   P  + I S ++F  K  A+ G   RYK RLV  G  Q  G  Y +++AP+   A  R  L + A+EDLEL S+D+S+A++       G     VY+K P G +   P  V  L ++L G +QAG  W + L   L K GF  L    +V++   L  G   ++++ VDDI +AS+S    ++  ++L + FK + L P S  +G  +ERDRA +++ ++       +LE +G     P  TP  PG+ LS+D      S+ + M    Y   VG+ F      RPDI+  VG L +F  +P + H  A  +L  Y++ T    + +   + D      +D+DH  CPDTGRSTSG  + +    I   S+LQ I  LS+ EAE VA V A  E   + ++L E    V    R   D ++ + +A + +H  R++HL++++++L+DEV++ R+ +EH+       D+ TK L
Sbjct:  157 RWLRAAQDEIQSLVENQTFELVQLPPGRKAIGSRWVFRVKRNAD-GSIERYKGRLVAKGFSQRPGFDYNETFAPTPKWASIRAILALAALEDLELESVDISSAYLN------GELKEEVYMKQPEGFEEKSPDWVWHLLKSLYGLKQAGRCWHEKLHEVLTKLGFDRLVCEHSVWVY--LRDGVRIIISVFVDDITIASKSKDSIQRVKDELRAHFKLRDLGPTSWLLGVKIERDRAKRSLSISQRQYALDILERYGFANCDPVGTPMDPGLRLSADMGPSTPSAAREMQDVPYGQAVGSLFYLAVATRPDIARTVGNLARFSKNPGMAHWKAVKHLFRYIKGTLDYKLTYSPSSSDELFTSYTDADHAGCPDTGRSTSGYVIKMGTGAISWSSRLQSIVALSTTEAEFVAAVSAGQEVLWLRNLLTEFGFDVSAASRLRIDNLSALSVAKNPEHHGRMKHLDLRFYWLRDEVAKGRIEIEHLRTSDMPADILTKSL 644          
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Match: A0A060SIJ8_PYCCI (Integrase catalytic domain-containing protein n=2 Tax=Trametes TaxID=5324 RepID=A0A060SIJ8_PYCCI)

HSP 1 Score: 222 bits (566), Expect = 2.280e-59
Identity = 160/496 (32.26%), Postives = 250/496 (50.40%), Query Frame = 1
Query:   52 RWKAALNAILDQLESSQFVHFVPRTPDMQVIPSHFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRLFLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAP-PGMVLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGTFQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERDRAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSD------SSGQRMDVNTYQSLVGA-FQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLRRTASKGMVFG-GARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHKSKLQHITTLSSAEAELVALVLAICEAKLVCSMLWEL-VRVRGPMRAYTDCMAVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKFNFTDVFTKPL 1509
            RW  A    +  L  +Q    V   P  + I S ++F  K  A+ G   RYK RLV  G  Q  G  Y +++AP+   A  R  L + A+EDLEL S+D+S+A++       G     VY+K P G +   P  V  L ++L G +QAG  W + L   L K GF  L    +V++   L  G   ++ + VDDI +AS+S    ++  ++L + FK +    S  +G  +ERDRA +++ ++       +LE +G     P  TP  PG+ LS+D      S+ + M    Y   VG+ F      RPDI+  VG L +F  +P + H  A  +L  Y++ T    + +   + D      +D+DH  CPDTGRSTSG  + +    I   S+LQ I  LS+ EAE VA V A  E   + ++L      V    R   D ++ + +A + +H  R++HL++++++L+DEV++ RL +EH+       D+ TK L
Sbjct:  925 RWLRAAQDEIQSLVENQTFELVQLPPGRKAIGSRWVFRVKRNAD-GSIERYKGRLVAKGFSQRPGFDYNETFAPTPKWASIRAILALAALEDLELESVDISSAYLN------GELKEEVYMKQPEGFEEKSPDWVWRLLKSLYGLKQAGRCWHEKLHEVLTKLGFDRLVCEHSVWVY--LRDGVRIIIPVFVDDITIASKSKDSIQRVKDELRAHFKLRDLGPSWLLGVKIERDRAKRSLSISQRQYALDILERYGFANCDPVGTPMDPGLRLSADMGPSTPSAAREMQDVPYGQAVGSLFYLAVATRPDIARTVGNLARFSKNPGMAHWKAVKHLFRYIKGTLDYKLTYSPSSSDELFTSYTDADHAGCPDTGRSTSGYVIKMGTGAISWSSRLQSIVALSTTEAEFVAAVSAGQEVLWLRNLLTAFGFDVSAASRLRIDNLSALSVAKNPEHHGRMKHLDLRFYWLRDEVAKGRLEIEHLRTSDMPADILTKSL 1411          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig845.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y454_HETAK0.000e+094.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DC66_HETAK0.000e+094.32Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A6V1VJZ2_HETAK9.370e-30078.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y431_HETAK2.590e-23691.99Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V1TGB8_HETAK2.500e-23364.55Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4DE91_HETAK3.100e-19079.63Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8J3_HETAK2.540e-12884.58Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y451_HETAK3.890e-8095.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A060T044_PYCCI6.560e-6332.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SIJ8_PYCCI2.280e-5932.26Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig845contigH-akashiwo_Contig845:308886..310397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4558.Sb06g016046.1
PFAMsRVT_2,Retrotran_gag_2,rve
Model size1512
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.03e-58
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37RIF@33090|Viridiplantae,3G9AM@35493|Streptophyta,3M33Z@4447|Liliopsida
Descriptionsource UniProtKB
Cds size1512
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388009.5211854-CDS-H-akashiwo_Contig845:308885..3103971681388009.5211854-CDS-H-akashiwo_Contig845:308885..310397Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig845 308886..310397 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig845.6.1prot_H-akashiwo_Contig845.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig845 308886..310397 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig845.6.1

>prot_H-akashiwo_Contig845.6.1 ID=prot_H-akashiwo_Contig845.6.1|Name=mRNA_H-akashiwo_Contig845.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=504bp
VYVPRSNRAALECPDSLRWKAALNAILDQLESSQFVHFVPRTPDMQVIPS
HFIFAYKEPAEEGGEGRYKVRLVLDGSKQVRGVSYIDSWAPSLPHAGWRL
FLHIFAVEDLELLSLDVSNAFVQVPMSSQGAKSPRVYIKVPPGMDAPPGM
VLELDRALEGSRQAGNLWFKYLRAFLRKWGFVPLDTAETVYIRGSLSAGT
FQMLAIHVDDIQVASQSVALQKKFVNQLGSVFKHKLCPASRFVGHDLERD
RAAKTIKVTAASKIAHVLEAHGLDEVHPKYTPCAPGVHLSSDSSGQRMDV
NTYQSLVGAFQFIQEFRPDISFAVGKLPKFLVSPNLDHMDAALYLAGYLR
RTASKGMVFGGARDYTVRVVSDSDHGNCPDTGRSTSGLGVFVWGSLIVHK
SKLQHITTLSSAEAELVALVLAICEAKLVCSMLWELVRVRGPMRAYTDCM
AVVHMANHQKHLQRIRHLNIKWHFLKDEVSEDRLSVEHIPGKFNFTDVFT
KPLN
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mRNA from alignment at H-akashiwo_Contig845:308886..310397-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig845.6.1 ID=mRNA_H-akashiwo_Contig845.6.1|Name=mRNA_H-akashiwo_Contig845.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1512bp|location=Sequence derived from alignment at H-akashiwo_Contig845:308886..310397- (Heterosigma akashiwo CCMP452)
GTTTATGTGCCTAGGTCCAACCGTGCGGCTCTCGAGTGCCCCGACTCTCT GCGCTGGAAGGCGGCGCTCAATGCTATCCTGGACCAGCTTGAGTCCTCTC AATTTGTCCACTTTGTGCCCCGCACCCCTGATATGCAGGTCATCCCGTCT CATTTTATCTTCGCGTACAAGGAGCCGGCCGAGGAAGGGGGCGAGGGCCG GTACAAGGTGCGCCTTGTGCTTGATGGTAGCAAGCAGGTCCGGGGTGTCT CCTACATTGACTCCTGGGCCCCGTCTTTGCCGCATGCTGGGTGGCGCCTG TTCCTGCACATATTTGCTGTGGAGGACCTTGAGCTGCTCTCCCTCGACGT CAGCAACGCGTTTGTTCAAGTGCCCATGTCCTCCCAGGGCGCCAAGTCGC CGCGGGTCTACATCAAGGTTCCTCCGGGCATGGACGCTCCGCCTGGCATG GTTCTTGAGCTGGATCGGGCGCTGGAGGGTTCCAGGCAGGCGGGCAACCT CTGGTTCAAGTATCTCCGTGCTTTTCTTCGCAAGTGGGGTTTCGTACCGC TGGATACAGCCGAGACCGTATACATTCGTGGCTCCCTGTCTGCTGGTACT TTCCAGATGCTTGCTATTCATGTTGATGACATCCAGGTTGCCTCTCAGTC TGTGGCACTCCAGAAGAAGTTTGTCAACCAGCTGGGGTCTGTTTTCAAGC ACAAGCTTTGTCCGGCGAGTCGCTTTGTGGGCCATGATCTCGAGCGCGAC CGTGCGGCGAAGACCATCAAGGTCACAGCTGCCAGCAAGATTGCTCATGT CTTGGAAGCTCATGGCCTGGATGAGGTTCACCCTAAGTACACTCCGTGCG CTCCGGGCGTGCATCTCTCCTCCGACTCCTCGGGGCAGCGGATGGACGTC AATACCTACCAATCCTTGGTTGGGGCTTTCCAGTTCATTCAGGAGTTTAG GCCTGACATCAGCTTTGCGGTTGGCAAGTTGCCCAAGTTCCTCGTGTCTC CCAACCTTGACCATATGGATGCTGCCCTGTACCTTGCTGGTTATCTGCGG AGGACTGCCTCCAAAGGTATGGTGTTTGGCGGCGCCCGGGACTACACCGT CCGGGTTGTCAGTGATAGTGATCATGGCAACTGCCCCGACACTGGGAGGT CTACCTCTGGTCTGGGTGTGTTTGTTTGGGGGTCTCTCATCGTCCACAAG TCCAAGCTCCAGCATATCACCACTCTCAGTAGTGCCGAGGCTGAGCTTGT GGCCCTAGTCCTGGCAATCTGCGAGGCCAAGTTGGTGTGCAGCATGCTTT GGGAGCTGGTGCGTGTGAGGGGTCCCATGCGCGCCTACACGGACTGCATG GCGGTTGTGCATATGGCGAATCACCAGAAGCATCTGCAGCGGATCCGGCA CCTGAATATCAAATGGCATTTTCTCAAGGATGAGGTCTCTGAGGACAGGC TCTCTGTCGAGCATATTCCTGGGAAGTTCAATTTTACTGATGTGTTCACA AAGCCTCTCAAC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig845:308886..310397-

>mRNA_H-akashiwo_Contig845.6.1 ID=mRNA_H-akashiwo_Contig845.6.1|Name=mRNA_H-akashiwo_Contig845.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1512bp|location=Sequence derived from alignment at H-akashiwo_Contig845:308886..310397- (Heterosigma akashiwo CCMP452)
GTTTATGTGCCTAGGTCCAACCGTGCGGCTCTCGAGTGCCCCGACTCTCT
GCGCTGGAAGGCGGCGCTCAATGCTATCCTGGACCAGCTTGAGTCCTCTC
AATTTGTCCACTTTGTGCCCCGCACCCCTGATATGCAGGTCATCCCGTCT
CATTTTATCTTCGCGTACAAGGAGCCGGCCGAGGAAGGGGGCGAGGGCCG
GTACAAGGTGCGCCTTGTGCTTGATGGTAGCAAGCAGGTCCGGGGTGTCT
CCTACATTGACTCCTGGGCCCCGTCTTTGCCGCATGCTGGGTGGCGCCTG
TTCCTGCACATATTTGCTGTGGAGGACCTTGAGCTGCTCTCCCTCGACGT
CAGCAACGCGTTTGTTCAAGTGCCCATGTCCTCCCAGGGCGCCAAGTCGC
CGCGGGTCTACATCAAGGTTCCTCCGGGCATGGACGCTCCGCCTGGCATG
GTTCTTGAGCTGGATCGGGCGCTGGAGGGTTCCAGGCAGGCGGGCAACCT
CTGGTTCAAGTATCTCCGTGCTTTTCTTCGCAAGTGGGGTTTCGTACCGC
TGGATACAGCCGAGACCGTATACATTCGTGGCTCCCTGTCTGCTGGTACT
TTCCAGATGCTTGCTATTCATGTTGATGACATCCAGGTTGCCTCTCAGTC
TGTGGCACTCCAGAAGAAGTTTGTCAACCAGCTGGGGTCTGTTTTCAAGC
ACAAGCTTTGTCCGGCGAGTCGCTTTGTGGGCCATGATCTCGAGCGCGAC
CGTGCGGCGAAGACCATCAAGGTCACAGCTGCCAGCAAGATTGCTCATGT
CTTGGAAGCTCATGGCCTGGATGAGGTTCACCCTAAGTACACTCCGTGCG
CTCCGGGCGTGCATCTCTCCTCCGACTCCTCGGGGCAGCGGATGGACGTC
AATACCTACCAATCCTTGGTTGGGGCTTTCCAGTTCATTCAGGAGTTTAG
GCCTGACATCAGCTTTGCGGTTGGCAAGTTGCCCAAGTTCCTCGTGTCTC
CCAACCTTGACCATATGGATGCTGCCCTGTACCTTGCTGGTTATCTGCGG
AGGACTGCCTCCAAAGGTATGGTGTTTGGCGGCGCCCGGGACTACACCGT
CCGGGTTGTCAGTGATAGTGATCATGGCAACTGCCCCGACACTGGGAGGT
CTACCTCTGGTCTGGGTGTGTTTGTTTGGGGGTCTCTCATCGTCCACAAG
TCCAAGCTCCAGCATATCACCACTCTCAGTAGTGCCGAGGCTGAGCTTGT
GGCCCTAGTCCTGGCAATCTGCGAGGCCAAGTTGGTGTGCAGCATGCTTT
GGGAGCTGGTGCGTGTGAGGGGTCCCATGCGCGCCTACACGGACTGCATG
GCGGTTGTGCATATGGCGAATCACCAGAAGCATCTGCAGCGGATCCGGCA
CCTGAATATCAAATGGCATTTTCTCAAGGATGAGGTCTCTGAGGACAGGC
TCTCTGTCGAGCATATTCCTGGGAAGTTCAATTTTACTGATGTGTTCACA
AAGCCTCTCAAC
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