mRNA_H-akashiwo_Contig845.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A836CBY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY7_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.640e-83 Identity = 120/213 (56.34%), Postives = 159/213 (74.65%), Query Frame = 1 Query: 4 NGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQ-LKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQ 639 N +++ +L+ ++ +VT +AD +RGWT E ++R+P DNL YE+S + + + TKA TSM AYG+GDF Q L+G TLET+DL+R++RSA AG HGP+CHFWIEWM+ANL F+ AWWNF+PKV+ADQT +SL LNA Y GL K P EI +KTTCVPA+ + WRFWP +HC+SFS+L+P FKLLFID+ME+IWVTIL+ V Sbjct: 127 NLLVVGALVGGALYKVVTVDADLSRGWTIWEIILRVPSDNLWSYESSVTHNAVPTKAATSMVAYGIGDFLAQCLRGETLETIDLKRTARSAAAGLFVHGPMCHFWIEWMQANLDFNGAWWNFLPKVVADQTVYSLVLNAAYTSFVIGLSGEKKPSEIWDYVKTTCVPAITSSWRFWPLIHCLSFSTLIPKDFKLLFIDLMEIIWVTILSSVAN 339
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: D7G7V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V0_ECTSI) HSP 1 Score: 254 bits (650), Expect = 1.230e-81 Identity = 119/212 (56.13%), Postives = 147/212 (69.34%), Query Frame = 1 Query: 4 NGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQ 639 N ++ AF F L T + D ARGWTW E L+R+PGDN RYE + S PI+TKA TS AYG+GDFT Q+ G+TLE +DL R++RSA AG + HGPLCHFWIE M+ L FD AWWNFIPKVIADQT WS++LNA Y + LQ P E+ ++K+ PAL + WRFWP +HC SFS+ +P KLLFID ME+IWVTIL+ V Sbjct: 56 NAAVVFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKAFTSCVAYGLGDFTAQLFTGKTLEDMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVAN 267
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A6H5KZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF3_9PHAE) HSP 1 Score: 256 bits (655), Expect = 7.570e-81 Identity = 120/212 (56.60%), Postives = 148/212 (69.81%), Query Frame = 1 Query: 4 NGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQ 639 N ++ AF F L T + D ARGWTW E L+R+PGDN RYE + S PI+TKALTS AYG+GDFT Q+ G+TLE +DL R++RSA AG + HGPLCHFWIE M+ L FD AWWNFIPKVIADQT WS++LNA Y + LQ P E+ ++K+ PAL + WRFWP +HC SFS+ +P KLLFID ME+IWVTIL+ V Sbjct: 176 NAAVVFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDFTAQLFTGKTLENMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVAN 387
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A061RIB7_9CHLO (Protein Mpv17 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIB7_9CHLO) HSP 1 Score: 241 bits (614), Expect = 6.740e-75 Identity = 114/213 (53.52%), Postives = 146/213 (68.54%), Query Frame = 1 Query: 1 VNGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQ 639 +NG ++A ++A + V + DYARGWT E+++R D+ + Y+ SAS HP +TKA TS AY +GDF Q QGRT+ TVDL+RS RS AGF HGPLCH WIEWMEA+LSF AW++ KVIADQT WS++LN MY LQ P +I ++++ T PAL +GWRFWPFVH +SFS +P KLLFID ME++WVTILA V Sbjct: 103 INGTVVALIVAGATYKAVEVDLDYARGWTLMEFMLRTARDDFVMYQHSASLHPFITKACTSGVAYSLGDFAAQTFQGRTVFTVDLKRSLRSGIAGFFIHGPLCHLWIEWMEAHLSFGGAWYSTFAKVIADQTVWSIFLNTMYTSTILALQGTRPPKIAEEVRLTWWPALSSGWRFWPFVHTVSFSPYVPAELKLLFIDTMEIVWVTILASVVN 315
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: C1N0U7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0U7_MICPC) HSP 1 Score: 234 bits (596), Expect = 4.470e-72 Identity = 111/214 (51.87%), Postives = 148/214 (69.16%), Query Frame = 1 Query: 4 NGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTIL-ARVTQD 642 N ++ S+ +F +V ++D + GWTW E L +P DNL Y+++ AHP+ KA+TS AY +GDFT Q+ QG+T+ETVDL+RS+RS AGF+ HGPLCH+W+ W EANLSFD AW+ K+IADQT WSL+LN+ Y LQ P I +I+ T A+ AGW+FWPFVH +FSS++P FKLLF+D +EVIWVTIL A V +D Sbjct: 105 NIAIVGSVAGGAVFGIVEVDSDISTGWTWYEVLRNIPQDNLAAYQSAVFAHPLPVKAMTSGVAYTLGDFTCQLSQGKTIETVDLKRSARSGVAGFLIHGPLCHYWLMWTEANLSFDGAWYGTPVKIIADQTAWSLFLNSAYTTCIMSLQGFGPRRIKNEIQATWYNAISAGWKFWPFVHAFTFSSIIPQDFKLLFVDCVEVIWVTILSAAVNRD 318
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A7S0SAT7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SAT7_9CHLO) HSP 1 Score: 228 bits (581), Expect = 7.150e-70 Identity = 110/216 (50.93%), Postives = 145/216 (67.13%), Query Frame = 1 Query: 1 VNGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTIL-ARVTQDT 645 VN ++ S+ + F +V ++D + GWTW E L +P DNL Y+ + AHPI KALTS AY +GDFT Q+ QG++L TVDL+RS RS AGF+ HGPLCH+W++W + NLSF AWW KV+ADQT WSL+LN Y LQ P I ++I T A+ AGWRFWPFVH ++FS ++P FKLLF+D +EV+WVTIL A V +D+ Sbjct: 118 VNIAIVGSVAFGSFFRIVEVDSDISTGWTWYEILRNIPEDNLNAYQQAVFAHPIPVKALTSGVAYTLGDFTCQLSQGKSLPTVDLKRSLRSGVAGFLIHGPLCHYWLQWTDLNLSFGGAWWAIPVKVLADQTVWSLFLNTAYTTCIMSLQGMRPANIKREIDATWYNAISAGWRFWPFVHLLTFSPIIPQDFKLLFVDCVEVVWVTILSAAVNRDS 333
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: F0Y502_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y502_AURAN) HSP 1 Score: 216 bits (550), Expect = 3.830e-68 Identity = 100/183 (54.64%), Postives = 130/183 (71.04%), Query Frame = 1 Query: 94 EYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQD 642 + L R+P D++ YE +PI KA TS AY +GDF +Q+ QGR L++VDL RS+RS AGF+GHGPLCHFW+ WMEA+L FD AW+ KV ADQT WSLYLNAMY + L+ P ++ +D+K T PAL + WRFWPFVH ISFS L+P+ KLL++D ME++WVTIL++V D Sbjct: 4 DLLARLPMDSIHSYEALVPTNPIFYKACTSGVAYTLGDFVSQIYQGRNLKSVDLARSARSGAAGFVGHGPLCHFWMVWMEAHLDFDGAWYGTGFKVFADQTVWSLYLNAMYSFLIGSFALRNPRDVWEDVKATSWPALRSSWRFWPFVHTISFSHLVPLDLKLLWVDAMEIVWVTILSKVAND 186
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A7S2B582_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B582_9STRA) HSP 1 Score: 220 bits (561), Expect = 5.620e-67 Identity = 98/181 (54.14%), Postives = 132/181 (72.93%), Query Frame = 1 Query: 100 LMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQD 642 L+R+P D + +YE +P+ KA TS AY +GDF +QV QGRTL+T+DL RS+RS AGF+GHGPLCH+W+++ME L F+ AWW KV+ADQT WS+YLNAMY + L L+ P ++ +D+K T PAL WRFWPFVHCISFS +P+ KLL++DVME++WVT+L++V D Sbjct: 133 LLRLPSDLIHQYEALVPTNPVFYKACTSGVAYTIGDFVSQVYQGRTLKTLDLARSARSGTAGFVGHGPLCHYWMQFMETYLDFNGAWWGTGVKVLADQTVWSIYLNAMYSFLIGSLALRNPKDVWQDVKATSWPALRTSWRFWPFVHCISFSHAVPLDLKLLWVDVMEIVWVTLLSKVAND 313
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A7S3ZXF3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXF3_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.570e-66 Identity = 101/183 (55.19%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 94 EYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTILARVTQD 642 + L ++PGD++ YE +P+ KA TS AY +GDF +QV QGRTL+TVDL RS+RS AGF+GHGPLCH+W+ +ME L FD AW+ KV+ADQT WSLYLNA Y + L+ P E+ KD++ T PAL + WRFWPFVHCISFS L+P+ KLL++DVME++WVTIL++V D Sbjct: 151 DLLAKLPGDSIRGYEALVPTNPVFYKACTSGVAYTLGDFVSQVYQGRTLKTVDLARSARSGAAGFVGHGPLCHYWMVFMETYLDFDGAWYGTGVKVLADQTVWSLYLNACYSFLIGTFALRDPREVWKDVQATSWPALRSSWRFWPFVHCISFSHLVPLDLKLLWVDVMEIVWVTILSKVAND 333
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Match: A0A7S0PIM0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0PIM0_MICPS) HSP 1 Score: 219 bits (558), Expect = 2.720e-66 Identity = 111/214 (51.87%), Postives = 145/214 (67.76%), Query Frame = 1 Query: 10 VLIASLLAF-TIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASAHPILTKALTSMTAYGVGDFTTQVLQGRTLETVDLRRSSRSAFAGFIGHGPLCHFWIEWMEANLSFDDAWWNFIPKVIADQTGWSLYLNAMYVLITKGLQLKPPGEIIKDIKTTCVPALMAGWRFWPFVHCISFSSLLPVTFKLLFIDVMEVIWVTIL-ARVTQDT 645 VLI +AF +F +V ++D ++GWT E L +P DNL Y+ S +P+ TKALTS AY +GDFT Q+ QG+ + TVDL+RS RS AGF+ HGPLCH+W++W E NLSFD A W KVIADQT WSL+LN+ Y LQ P I +I+ T A+ AGWRFWPFVH ++FS ++P FKLLF+D +EV+WVTIL A V +D+ Sbjct: 109 VLIVGSVAFGAVFQIVEVDSDISKGWTAWEILRNIPRDNLEAYQQSVFDNPLPTKALTSGVAYTLGDFTCQLSQGKKITTVDLKRSLRSGIAGFLIHGPLCHYWLQWTEENLSFDGALWAIPVKVIADQTAWSLFLNSAYTTCIMSLQGMGPERIKGEIQATWWNAITAGWRFWPFVHTLTFSPIIPQDFKLLFVDCVEVVWVTILSAAVNRDS 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig845.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig845.4.1 >prot_H-akashiwo_Contig845.4.1 ID=prot_H-akashiwo_Contig845.4.1|Name=mRNA_H-akashiwo_Contig845.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=215bp VNGVLIASLLAFTIFNLVTANADYARGWTWDEYLMRMPGDNLMRYETSASback to top mRNA from alignment at H-akashiwo_Contig845:57592..58236- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig845.4.1 ID=mRNA_H-akashiwo_Contig845.4.1|Name=mRNA_H-akashiwo_Contig845.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=645bp|location=Sequence derived from alignment at H-akashiwo_Contig845:57592..58236- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig845:57592..58236- >mRNA_H-akashiwo_Contig845.4.1 ID=mRNA_H-akashiwo_Contig845.4.1|Name=mRNA_H-akashiwo_Contig845.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=645bp|location=Sequence derived from alignment at H-akashiwo_Contig845:57592..58236- (Heterosigma akashiwo CCMP452)back to top |